SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR22102c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_geranylgeranyl_transferase_type-2_subunit_beta_[Amyelois_transitella]
Ontology
GO:0003824 F catalytic activity
GO:0004659 F prenyltransferase activity
GO:0004663 F Rab geranylgeranyltransferase activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005968 C Rab-protein geranylgeranyltransferase complex
GO:0006464 P cellular protein modification process
GO:0007601 P visual perception
GO:0008270 F zinc ion binding
GO:0016740 F transferase activity
GO:0017137 F small GTPase binding
GO:0018344 P protein geranylgeranylation
GO:0042981 P regulation of apoptotic process
GO:0046872 F metal ion binding
Transcript
Level		FPKM:19.15 TPM:18.76
ORF EntryO_TrvaFAMAMG25282_complete:A_TrvaFAMAMG_TR22102c0_g1_i1
Sequence
(Nucleotide)
AGACAAAATTTCTTAAAATCAGTTTCAAATATGAACTTTCCTATTAATTCTAATTAAAAT
AACAAGGTAAATAGTAAACTAAATAATTAAAAATGTCGTTTCCAACAAAAGATGTCGTGC
TGAAAGAGGATCGACCTAAAACTTTACTACTACAGAAGCATTCCGACTACTTAGCTAGCT
ATGGTTTGAACAAAGATGACTATGAATATTGTATGACAGAATATTTAAGAATGTCCGGTA
TTTATTGGAGCTTAACTGCTATGGAACTCATGGGGGCATCTTCAAGAATGCCTAAAGAAG
ATATAATACAGTTCATCAAACAATGCCAAGATAATAAAAGTGGGGGCATATCTGCCAGTA
TTGGACATGATCCACACATACTTTACACTTTAAGTGCTGTACAGGTACTAGCAATGTATG
ATAGATTAGATGTAATTGATGTAGAAGGAGTTGTTAGATACATAGTTTCATTACAACAAG
AAGATGGGAGTTTTTATGGTGACAAATGGGGTGAAGTAGACACGAGGTTTTCATTTTGTG
CTGTCATGTGTCTTTCACTACTGCAACAATTAGAAGCCATCAACATCAGCAAAACTGTTG
ACTTTGTGCTCAGTTGTATGAACTTTGATGGAGGTTTTGGTTCGAAACCTGGTTCGGAAA
GTCATGCAGGTCTGATCTATTGCTGTGTGGGTACTCTATCAATATGTAAACGTATGGACA
CCTTAAACGCTGATGAGTTAGCGTGGTGGTTGTGTGAACGACAGCTGCCCAGCGGAGGTT
TGAATGGAAGACCTGAAAAACTACCTGATCTGTGTTACTCTTGGTGGGTGATGTCCTCCT
TATCAATGTTAAATAGAATTCACTGGGTCGACAAAAAGAGCTTAGAAGAATTTATCCTGG
CATGCCAAGATGGAGAAACAGGAGGCTTCAGTGATAGACCTGGGGATATTCCAGATCCAT
TCCATACTTTATTCGGTCTGGCAGGACTTTCTTTACTTGGCAACACTGATATAAAACCTG
TTAACCCTACTTATTGCATGCCACAGGAAACGATAGACCGACTGAAACTGGAACCACAAA
TTTTGCACATTTAATTTTAAGAATAAATCAATATACTGTATATTCGTATTTGACCATTAA
ATTATATTATTTTAAAAAAA
(1160 bp)

- SilkBase 1999-2023 -