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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR2188c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_UPF0568_protein_C14orf166_[Amyelois_transitella]
Ontology
GO:0000993 F RNA polymerase II complex binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006388 P tRNA splicing, via endonucleolytic cleavage and ligation
GO:0042802 F identical protein binding
GO:0044822 F RNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048471 C perinuclear region of cytoplasm
GO:0072669 C tRNA-splicing ligase complex
Transcript
Level		FPKM:15.90 TPM:15.57
ORF EntryO_TrvaFAMAMG1315_complete:A_TrvaFAMAMG_TR2188c0_g1_i1
Sequence
(Nucleotide)
TTTTTTTTAAAATGCATAGTTTATTACTAGTTCATAATTTATCTGCAGATCCTTTCATTA
CATTTAAGTAATCAAAATGTTATTAAACTTTTATTAGTTAACACTGTTATTAAGATAATG
AGACTGGTTAATTATCTTCCAACACGACCAAGCTTAGTGTCTGTTCTTGGATCAGCGGTT
ACTGTTTGAACGGCAACTAAAGCTTCATTAATCTTAGTTTGTAAATCCCTAAGGTCTTGA
ACAAAAAGTAACTTCAATACATCTGAGGGTTGCTTGATTATGTTCTCCTCAATTTGTTGA
GGTTCTGGATGTGGGGACGTTTTCAGGACTTTAGCAAGAGCTGCAAGTCTTATTTTGGGG
TCTTGGTGTGGGCCAATGCTTGCCACAGTGCATACTCTGTCAACACCTGCTTTAAATGCG
GGAGTTGAAAAATCTAAGTTGTCCAAGGGGTTGGATGATACAACATTGGGAGCTTTTTGC
TTCTCCTCGACTTTGGCGTTTTTATATTTGTCAACATTATCTGCATATTCCAATCGTACG
GCGTAAGACAGCAGCCAATTTAACTGTTCGTTTGGGGTTCCCTCAGATGCAGGACTTACG
AGATCTTTCTGATAAGTATTGTATGATTCTTTCCAACATTCCGAATCAATATTTCTTAAT
CCCTCTCGATCTTCGATTTTGTAATGCCTTATTTTTTGATCTTCTAACCACAATATTACG
CTTCTGTATTCTTTCTCATCTTCGCAGTTGAAACTTTCCGGGTTAGGATGGCCTAGTGCG
GTCAATTTTAGTTTGAATAAAGTGGACATATTTGAAACCAAAATTATGGAACTTTTTTGG
GTTTCTATATTTTAATACAGATATGAGTAATTTAATTATTTTTGATTTGGATAAAAATAA
GGACAAGAAGCTTTCGTAAACAGGCCG
(927 bp)

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