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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR21712c0_g5_i1
Scaffold_id
NCBI non-redundant
(nr)		putative_Shc_transforming_protein_[Operophtera_brumata]
Ontology
GO:0000165 P MAPK cascade
GO:0000187 P obsolete activation of MAPK activity
GO:0001525 P angiogenesis
GO:0001666 P response to hypoxia
GO:0001784 F phosphotyrosine residue binding
GO:0005158 F insulin receptor binding
GO:0005159 F insulin-like growth factor receptor binding
GO:0005168 F neurotrophin TRKA receptor binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0007507 P heart development
GO:0007568 P aging
GO:0008286 P insulin receptor signaling pathway
GO:0009636 P response to toxic substance
GO:0010008 C endosome membrane
GO:0014070 P response to organic cyclic compound
GO:0016337 P cell-cell adhesion
GO:0030036 P actin cytoskeleton organization
GO:0030182 P neuron differentiation
GO:0030971 F receptor tyrosine kinase binding
GO:0031100 P animal organ regeneration
GO:0031175 P neuron projection development
GO:0031532 P actin cytoskeleton reorganization
GO:0032403 F protein-containing complex binding
GO:0032868 P response to insulin
GO:0032869 P cellular response to insulin stimulus
GO:0035094 P response to nicotine
GO:0035556 P intracellular signal transduction
GO:0040008 P regulation of growth
GO:0042127 P regulation of cell population proliferation
GO:0042542 P response to hydrogen peroxide
GO:0045907 P positive regulation of vasoconstriction
GO:0046875 F ephrin receptor binding
GO:0048408 F epidermal growth factor binding
GO:0048661 P positive regulation of smooth muscle cell proliferation
GO:0051219 F phosphoprotein binding
GO:0051384 P response to glucocorticoid
GO:0051721 F protein phosphatase 2A binding
GO:0071363 P cellular response to growth factor stimulus
Transcript
Level		FPKM:0.09 TPM:0.08
ORF EntryO_TrvaFAMAMG25187_5prime_partial:A_TrvaFAMAMG_TR21712c0_g5_i1
Sequence
(Nucleotide)
TTTTCTAATCTTTGTACAATAAATAGTATTTAATTATTTATTGACCACGCGAAATAATTT
AAAGCACTGAAATAGTATAAATTACCTTTATTTTAACACACACAATAAATTGATTGTGTG
ACAAAAAAAAATGATTTTAAACTCCTTTTGAGAGAACACCAAAAGTGTTTCTGATAACTG
GAAGTATGTGAAGTGTTTAAAGGCAAAGATAGTTTCAGTATTGTGATCGAAGTGTTTAAT
AAGTTTGTTTATTACAATGGCTGAGAGTAGTTCGTTCGTTGCGAAGCCGGCGCGGGGCTG
GTTGCATCCCGATTCTGTATTAGCCACCGATGGAGTCACGTATGCCGTCAGGTACATTGG
TTGCATGGAGGTTCTGACATCGATGAAGAAATTAGATTTTGAGACTAGATCACAAGTTGC
CAAAGAATGCATAGCCAGGGTGTGCGCAGCGGCAGGCGTCCGCTCAGCTGATAAAAAACG
TCGGGGTTGCCAAGCAGCCGCCCGCGCCC
(509 bp)

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