SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR21680c0_g2_i4
Scaffold_id
NCBI non-redundant
(nr)		gephyrin_[Spodoptera_littoralis]
Ontology
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0006777 P Mo-molybdopterin cofactor biosynthetic process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016740 F transferase activity
GO:0018315 P molybdenum incorporation into molybdenum-molybdopterin complex
GO:0030054 C cell junction
GO:0030425 C dendrite
GO:0032324 P molybdopterin cofactor biosynthetic process
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0046872 F metal ion binding
GO:0061598 F molybdopterin adenylyltransferase activity
GO:0061599 F molybdopterin molybdotransferase activity
GO:0072579 P glycine receptor clustering
GO:0097112 P gamma-aminobutyric acid receptor clustering
Transcript
Level		FPKM:1.92 TPM:1.88
ORF EntryO_TrvaFAMAMG25003_complete:A_TrvaFAMAMG_TR21680c0_g2_i4
Sequence
(Nucleotide)
AAATTATTGATAACTACGATTTATTATCTCTTTAGTCATTCATTTACTTATTTTTTACTT
ACAATTAGAAAGTACAATATTTTAAAAACTAGAGAACCACAGAAGACTGGATCTACGATT
TAAACCACCAGTGTTGTAACCTTATGCTGTTATCAAGTGAACTTCGAAAGGATGTTTTTG
GTTTCAGAGAACACGGGTATAAGAATATAATAGATTGCGGTATATCTCGCGACACTCCTG
AAGAGTTAGTGAGAGGTATATCAAATGCTTTACGTAAGGCCGATGTTTTAATATGCACTG
GGGGCGTGTCTATGGGAGAGAAAGATTTGCTGAAACCAGTACTAATAAACGATTTTGGTG
CAACTCTCCACTACGGGCGCGTCCGCATGAAGCCCGGGAAGCCCAGTACTTTTGCAACTT
GTCAGTTTGAAGGGAAAACCAAATATATTTTTGCGCTACCGGGAAATCCAGTTTCGGCTT
ACGTATGCTGCTTACTGTTCGTGGTCCGTGCTCTACGAGTTTGTAATGGGAAGAAGGGAT
CATGGCCGAAACTTCGTTGTAAACTAGGCCACGCCGTCACCCTGGATCCGAGACCAGAGT
ATGCAAGAGCAGAGATTGATCTGTCACAAGACGATGATATGCCAACCGTGAAATTATTAG
GCAAACAGTGCAGCAGTCGACTGCTGAGCGCGTGCGGTGCGAGCGTGTTGGTGCAGTTAC
CGGGCTCGTCGAGCGCACAGCCGCGTCTTCCCGCCAGCGCTCTCGTCACTGTACTTATCA
CCGGCCTACTACACAACTCAGCCTAATTTATACTTAGAATATAGTTGCAATTTTTACCGC
ACTCACTGGTGGATGTTTCTGTATTAATGGGTTGATATTATACGAATTTATTTGATGATG
TATGTTTTTATCCAAAGAGTAAGTGATAAATAACTTTGTTCTAAATTATTCCTTATGTAG
TAAAATACTAATTAATCATGCTCAAGTCCACAATAGAGTTCTATAATTTTATCCTATTAT
ATTTTTCAAAAATAAATAGATTACATAGTTGCAAGTTGCAAGCTTGACTAATGGATCTTT
TTATATTTAAAAGTATTGTGATAGATAGATAACCTTTGAATCTCGATTGTGAATCATATT
TATATCAAGGTTTCTCCAGTTATATTTGTTGTATAGTTAGTAAAGATTTTTGTTTCTTAG
ATAGTAAAGTTGAATGCATATTGGACAATGTCCACGATGATGGTGCTGGTTACAATAAAT
TAAAACTTGTTACATTTTATTTTGTTTTACTTTCATCAATACTAATTCCTTAATATGAAG
AATATTTCCTACATCTGGAACTAAAACATTTTAGAAGCAACAGAATGAAGCCAATTGACA
GAATGCTATCATGGATATAAATGACACTGAGATAAGAGAGTGCTGATTTATTTTGGTTTG
CTTTGCATACTAAAATATTCATAGATATTATTGTGTCATGTTTTAGTTGATTGATTTGTT
CCAGTTATCTAATATTATGTAACAGTTAAAAAACCCCCTACATTAGGTTTAAACAGTTAA
AAAACCCCCTACATTAGGTTTAAACAGTTAAAAAACCCCCTACAT
(1605 bp)

- SilkBase 1999-2023 -