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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR21678c0_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_REST_corepressor_1_isoform_X2_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007221 P positive regulation of transcription of Notch receptor target
GO:0008134 F transcription factor binding
GO:0016568 P chromatin organization
GO:0017053 C transcription repressor complex
GO:0044212 F transcription cis-regulatory region binding
GO:0045747 P positive regulation of Notch signaling pathway
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0061086 P negative regulation of histone H3-K27 methylation
GO:0090309 P positive regulation of DNA methylation-dependent heterochromatin assembly
GO:2000619 P negative regulation of histone H4-K16 acetylation
Transcript
Level		FPKM:0.17 TPM:0.17
ORF EntryO_TrvaFAMAMG24978_complete:A_TrvaFAMAMG_TR21678c0_g1_i3
Sequence
(Nucleotide)
ATTCTTTCTTTTTATTTATTTAAGTTTATATGTGAATAATTAAAAATATCGACAATACTA
CTCTATAAACAAGTGTTAATAGTGTTTTTTAAGCGTAATCATGGTTTTAGCAGAAAGAAG
TAGTGATGTTCGGAACGGGAAGCGATCAAGGGGGCCAAGCCCCAATGATCATGGAAGTCC
AGATTCCAGTTCGGATGAAGAAAATGCCGAAAAGATTCGGGTCGGTCGGGACTATCAAGC
CGTGTGCCCAGAATTAGAACCAGTTGAAGCCAGGAGACCTGACTTGATATCTGATAGAGC
CCTTCTTGTTTGGTCGCCAACTACTGACATAGCAGACATTAAATTGGATGAATATATTAC
AACAGCTAAAGAGAAGTATGGCTATAATGGTGAACAAGCCCTTGGTATGCTTTTCTGGCA
CAAACATGACCTTAATCGTGCATCAATGGATCTTGCTAACTTCACACCCTTTCCTGATGA
GTGGACAGTTGAAGATAAGGTGCTATTTGAACAAGCTTTTCAATTTCATGGTAAAAGCTT
TCATAGGATCCGTCAAATGCTGCCAGATAAGTCCATTGCATCATTAGTGAAATATTATTA
CTCATGGAAGAAAACCAGAGCTCGTACATCTTTATTAGATGTCAGTGAGGTCAGGAATGC
CACAAGTTCAGGAACTGGAAAAAAGGAGTCAGGAGCATCATCAGAACCTGGTGGATCAGA
CAAAGAATCAGATAATGATGAAAAGGGCGAGGGCGGCGCAGAGGGCGCGGGCAAGTGGTG
CACCGTGTGCGGCATACAGTGCACTCGCACCACGCAATACAACTCCCACAAGTTGTGTCA
GGCATGCCTCGTGCACGCCAGGTCGGTAAACATCACTTTCCTTACTTCATTCCCATATCA
AATATGCATGTTGCAATCAAATCAATTGTGCCCCCCGAGTGAGAAATGCAATGTTTGAAC
GTTGACGGTGATGTGACAGACGCACGGGAACGATGAGACCGTTGTGCGGGCCCTCGGGCA
AACGCGGCCCCGGCGTTAAGCAACAGCGGTTCAAACATCGCCTGCCGCCCGGCATATACA
TCAATCACGACGATCTCGTCGCCATGGCCACCGGCCCGCAGCCCGGGGACGCCTCGCAGC
CCGGACACCTCAACCTGGGCGAGGCCATGCTCAAAGCTATGGACAGACAAATTATTACGA
TGAGAAGACAACTACAACAAAATAAACAGCAATTGAGTGCATTGAAACGCAAAGTTGGTG
ACACTGGAGTAGAAGATTTTCGTCCTGGCGAACCACCGGCAAAGATTAATTCACGTTGGA
CTAATGACGAATTACTTATGGCCGTTACAGCAGTAAGAAAATATGGAAGGGATTTCCAAG
CCATAGCGGAGACGCTCGGCACCAAGACGGAGGCGCACGTGCGATCGTTCTTCATATCGT
ACCGCCGCCGATACAACCTGGAGGCCGTGGTGCGGGAACACGAAGCGGAACGTGGAAACG
CGCATCACATTCAAGCTGGCACAACAAGTACTGAATCTGAAACAGCTGACAGTTCCAATG
CCAATAATGGCACTGCATCACCACAAACCACTGCAAAAGATGAGAAAATGGAAGTAGACA
GTGAGGGCGTAGCTCTGGGCGCTTCGGCCGAACAAGGCGGGCCTCCCACCACACCTCCCA
AGCCTAAATCATCAAAGTGATCACCCACCGATACAATACGAAAGTGAGGGAATTACACTT
TCCTAATGACCCCTGCCGGTCACTTATTATAAAAAAGTGAACTTTATAACACTGAATACT
CAGATACTATTATTTGGACAAATATTTGGGATTGTTTGAATGAAAAGTAAAATCTCACAT
TTCTAACATTATGATTGGAAGCATTCTACTAAATTATTAACACCCAAGGGAAAATGATTA
AACAACAAAAAGTAACAAGTAATTATGTGCTTTCAGTTTAAATTTAAGCAATATTATGCT
TTCCGATACCTAGTGCCTAACTCATAAATAAGTATATCAGCATTTCAATAAGCAATAAAT
TGTGATAGTAAGTAGTGTTTATATCTTTGTATTGTGCAAATAAATAATTATTATCAAACA
TCGTGCGTCGTCGAAACATTTCCATAATGGAATAACAAATGATAATGTATACTGTACGGA
ATTTGATGGACTTGTATATATTCGCTTTTAGGTTAAAAATTAAAAAATCATAATAATAGG
TATGTTGATATGATTGAGAATAATCTAGCAAGATTATGATAATGGTGACGTCACTGCTAC
TGGATTGACCTGTTTTACATTTGCATGGTATTATAGGTATGTTTAGTATCTATTTCCTGC
TTTTTAAATATAACACGTTTAGTGGATTTTCTAGAATAATTCTTAGCTATTTAATAAAGG
TGAGGTATGAGGACTTGTTTACACATGTTGTGTTGTTTGCTTGTACTTAATGCAACCTGT
TTCTTATCATTTCAGAATTGTTTATCAAAGACATATTACTTACTTAGTACCTAAATATAA
AAAGTAAATTATCTTACTATTGATTCATTTTACTAATTTGTGTTGGTACAATTTACTGAA
TCTGTTGTTTCTTCACGAGCCTAGCTCTATTGTTAGGAGGGTTTCACATTCGAAAGTACG
CAGCAAATCATATTTTGTGTAAACAAGTCTTCATTTCCCTCTTATGTAATATACTCGCAT
GCTTTTTCCTTATACTAAATACGAGTTTGCTAACTTTAGGAATTAATTATGTAATGTTTT
GCGTAATGTGTTTACTATGAATTATTTTATTATAATTAATAGGAATCAACTAGCTAATTT
AGTATGTAAGTAACGTATTTTACAAAATTGTGTAGTCGCATACGCTTTATTTCACAAACC
GGTTGTAATACAAACTTATGAAGTAAATATTAATGATAACATTATAATAACAGTACATTC
GAACAAGTTAAAGGAAAAGCCACATCTACCGAAGACTATTTAAAAAAATGAGCTTCCTAA
GAAACTTTTGTCTAAGCTTTGGTCCTAGGATTCGGCTCTCACACCAAATTTTTTAGCAAG
TTGTCGCAATTATATAAAAGATAGTGTTTTTACAATCAATTTGGGTGCCATATACAAAGA
GGCGTACAGGAAAAGGAATGTAACATAACAAAAACTAAAAAAAAGGCTAGCCTTACGCTT
CGTAAAATAAAAACGTATGGTGTAGATATGATTTCTACCGTGACTATTGACGCACTGATA
ATTTCTCGGGGATAAATCACAAATTGACAAACTTGTAGCCATGCTGCTGTTATTGTACAA
TTACATCAGAATGAACTTCGGTAGATAGTAATAAAAGACTCAATTAAACACAAAAAATAC
AGTATCATGAGGTATGTATTACACCCGGCATATTCTAGATGTATGTAACAACTGCGTTTA
CATCACTTACACTATTACTAAACGGGTTCTTACCAGTGTTAGACGAAAAAAAAGCCAAAA
(3480 bp)

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