SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR21662c0_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ATP-binding_cassette_sub-family_G_member_1-like_isoform_X2_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0017127 F cholesterol transfer activity
GO:0033344 P cholesterol efflux
GO:0034041 F ABC-type sterol transporter activity
GO:0042803 F protein homodimerization activity
GO:0046982 F protein heterodimerization activity
GO:0055085 P transmembrane transport
Transcript
Level		FPKM:0.27 TPM:0.27
ORF EntryO_TrvaFAMAMG24877_5prime_partial:A_TrvaFAMAMG_TR21662c0_g2_i1
Sequence
(Nucleotide)
ATCGAAAGGAACTTCGTTCCATCCGGGTGTCCTTGACACCTCTCAAGTTTTTTTTTGTAT
TTGTCATGGTGGTGTTGCGCACCCTTTATGTAATTTTTGGACTTAAGTACTACGTAAATG
TTATTTTTAAAGCTACCTGATTGTTTAATGTATTTTGATCGATTTTCATTTAATGAAATG
GAATGATACTAGTACTTAAAATGGCCTATAAGTCAACATGTAATTCATAACGTACTTAGT
TCCTGTGTTGGAATGTATCTCCGTTTTTCCCGAGCACTACGACTTATCCCTCTTAGGTAG
ATAACCACTTCCCAACAGGTCATGGGATATTAAACCTAGTCTGCATTAACTTACCAAACT
AAATTTAAAGCATAACTAAGCTATAAACCGAAAAATAATTCCATTTTTTTCATCGATTTT
GAGTCTACCTCTAATGCAACAAGGTCCTATGACAATGAATTTTATTTTATACCCGTACGC
AGCTAGAGAAAAAATATTAACAATACACATCACACAAGCTTTCACCTGCACGCTTTATGC
GCTCTATACAGTAAAACAAGTATTAAAGTAATTTGTAACAATAATATCCATACTATTAAA
GCTACAAAGTCGTACAGTATACTACTAGGTAATATTCCCAGATACTCCAGGTATTTAGCA
GGATTCTTAAACATGCAATAATCTACATGACACGGTAATTTCTCTCTTTGGAATCCGTAC
ACTGCCTTTAGAAACGCATTGAAACCGTAACGAAAATAGGAAATCAAGCAAAACGGTTGA
AGATACGAAGGTATTTCTTTATATGTAATGAAAAATTCCGAGAACATAAGCATTGGTATG
TTCGCAGCAGGAATCACAAATAGTCCGAGCTTCATTCCATAAGCTGCACCCACTACTAAT
CCGAATGTTTGCGCCAAAATAGTGATGAGCACGCATATAAGCCACGCTATACCCATTCTC
AATGGTTCCAGAGGCTGTGATGTTAAGTACCACGCAGGAAATAAGAATACCGTGGAACAT
AATAGCTGTATAGGTAGGTCGACTAAAATTTTCGAAATGCAGTAGAGTATTAGTGAATAC
CATTTGTTCATGTGTTGCTGAAGAACCACTGTCGATTCTGAGGGAAACGTATGAATAGTG
GGCATAGCATTGGAGAAGAATAAGAACAACAAGAAGAAAAACAAACATCCACTGTTTGTC
ATGATCCTGTGCGCTTCCTCACCGGCTCCGTGGTAGAGTGCACCCAATAACAGTGCCACC
ACTAGATGTGCCACTAATCGTATCTGAGTTAGGTGAACATCTCTGAGGGCGCCAATAAGG
CATCTCCACAGTAATGCATTACATTGTTGAAATACACCTGCATGGTATGTGTATGATGAT
ATTATGGGATACGGATTTATTAGTGCTTCCGATTCCGGTGACGATTCTTCACTTTTCTTA
GAAGAAATATGAACTTGACTAATCTTTCTCATTTCAAGAGCGTAGCTCCGTGCTTCGTTT
TCTAAAATTTGATGCGATGGATGATTAATACTTGCTATTTCTAGTACTGGAAAACAACGT
ACCATTAACATTGTATAAACAG
(1582 bp)

- SilkBase 1999-2023 -