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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR21655c1_g1_i5
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_partitioning_defective_3_homolog_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0005547 F phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005923 C bicellular tight junction
GO:0005938 C cell cortex
GO:0006612 P protein targeting to membrane
GO:0007049 P cell cycle
GO:0008289 F lipid binding
GO:0010801 P negative regulation of peptidyl-threonine phosphorylation
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0019903 F protein phosphatase binding
GO:0022011 P myelination in peripheral nervous system
GO:0030054 C cell junction
GO:0030154 P cell differentiation
GO:0031643 P positive regulation of myelination
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0033269 C internode region of axon
GO:0043025 C neuronal cell body
GO:0043234 C protein-containing complex
GO:0044295 C axonal growth cone
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0051301 P cell division
GO:0060341 P regulation of cellular localization
GO:0070830 P bicellular tight junction assembly
GO:0090162 P establishment of epithelial cell polarity
Transcript
Level		FPKM:3.76 TPM:3.68
ORF EntryO_TrvaFAMAMG24820_complete:A_TrvaFAMAMG_TR21655c1_g1_i5
Sequence
(Nucleotide)
GTTTTCGTAAATGGTTAACCAGTACCCACAATATGGAAGAGTATTTCAAAATCTTTCGTC
ATGCCTATTAGACTACAAACAGAGACCGATTCATTAGTCATTAATAAATGAATGTACATT
CGAAACCGATCGTTATAATAGTGATAATGTTAATGATAATGCGATAGTTTCCCGGGTCGT
CGCGGCGGGGCGGTGTCGTATTCGTAGTAGTTGGACTGGGGGCGGCCCCCGTCCCTACAG
GAGCGCTGAGAGTGGTAACCAGCCCCCGTTCGACGACTTTCTTCCTCAGCTTTGGCCCTT
TGCGACTGAACTTGTCTTCTCATCTGTCCGATTTGAACTTCACTTAATTTCTCTCGTCTT
GTACTGGAATATTCATCAGTATTAAGATTTTGTTGTATTTCTTCGTAGTTTACGTAATGA
CCAGTCGGACCCCACGCGCTGTCCATTGCCTGTTGTTGTTGTGTGTTGCGATGCGGCGGC
GCGCGGTACGGCGGCGCGTTGTGTGCGAGTGAGGCGGCGAGTGAGGTGGCGGGGGCCGCG
TGGCGCCGCTGTGAGCGCTCCCCGCTGCCGCTGCTCTGTCGCGAGTGAGATGGCTCCAGA
CGAGACGGTGGTTGTTGATTATCTTCAGCGCGTTCATCGGTTCTATTGTGTCGGTCGAGT
GCGTCCCTCGAGAGCGACTTCTCGGACGCGCGTCCTGGTTGCGACCGACCGCACTCACCG
TCCGACTTCTTATTAGTTTTACCCATTCTGAACATAGTAGATAATGATTTGAAAAGCGAT
GGTTTCTTGTGAGAGAGCGATGACTGCTGAGGAGATCCTCTGATGATTTCCGGGCCTGCA
TTATCGTCAGTCAACCAATGTTTCAACGGTGGGTGCGCTCGCGCATAAATAGGTTCGTTT
CTGGGATTCCTTTGGTTTTCTTGTATAGCTATTTGAAGTGATTCCAAACTGGATGATTTT
CTCATACCGAGTGATGGCCCTACTTGCATAGAATTAACAGCCTTGATTTCCTTAATCTTC
TTATAAGTGCCGGTCTGCTTGGCGTCCATTGCGGCGTGTCGTTTCTCGGACATGGAGCGT
CGCCCCACCGCGTCCCGGCTGAACCCCGCGCCCCCCGCACTCCCCGCGCCGCACTCGCTA
CCGGACTCGCCGCCGCCGCTACCCCTCGTCGTTCCATAATCTTCTTCAATAATAACATTA
TGATGAGCCGGCGGCGACCGAGACATGTGCACGTGACCTAGGTTCTGTCTATAATGGTGT
CCGTTCACCTGCGGAGGATCTATCTGTGTGGCCATATAATAACTCTCATTCCTTAGCCCA
GTCAGTCTGTCAATCACAGGGTTCCATCCATCAAGCCTGCTCCATTCAAAACTGTCCCTT
TTACTGTCATGCGGGATCTCTTTATCCCTTTCTAAATAGCCTTTGGTATCATCAGATTGG
TTGGAAACCCAACTATTATTGTTGTTTATGGTTACTATGGAAGCGTGTTTTTTAGTACTG
CTTCTTGTTTCGTGGTTATCGAAATCGTTTTTGTTGTAGTCTGTAGGTTTGTTTTCTTTG
TCGCTGTTAGCTGTGTAAATGACTGTGTTGAAATGTGAGTTGTCGTTTGAATTTGTTGTG
TCGTTTCCGTTTGGTGGAGTATCGTCTTTCCACCTCGCTAGACTGTCCATACTTTCTGTC
CTCCTAGCAATAGTAAGAGATATGCTGCCAGTCCGCTGAGGTCGCGCGTGTAACAAGGCC
TTACGAAGCGTCTCCATTGCTTCGGCATTAGATTGACCTACCAATGATACTCCATTCACA
CTGAGTAGCTGGTCGTTTGTGTGTAATCTTCCATCGCGTGACGCAGCGCCTCCATTTAAT
ACTGATTTGATAAAGATCCCTAAATCCTGAGGGTCGGGCCCTACAGTCACTTTTCCCTTA
ACACTAATACCGAGTCCAGCTTTCTCTGAATCGTGGACCGGAACATCTAGTCGAAGAACT
AGACGATTTCTTAAACCTAACGCAGATCCCGAAGAAGTATTCAAAGCCTCTTGTAGCGCA
CTATCTGGGCTTAATTCCTTATTCAACAGATCATCTTTAGAGGAACTCTTCTGTATCCGA
CCTCTCATCGAGCTGTTCTGATTGATCGCATTCACCATACTCGAGACTCGACCGTTCTCT
GTCACTTCGGGCTTGTTAGGATCAGTACCTATTGCCTTCTCCGAGTATTTACTGGGACTT
TGCTGGGGTTCTACCCTCTGTGTCCGAGTAGACGCTGCTCTCTCTATAACAATATCGACG
GTGGAGTGCGTGGGCGTGTTCCTGAGCAGCGCGACCACCTGCTGCTGCGTGAGGCCCGAC
ACCGACACTCCGTTCACAGACACGAGCCGGTCTCCCGCGCGGAGACGACCGTCTGTAACC
GCCGCACCCTTAGGTAAGATATTTTTGATGTAAATAGGACAGTGTCCTCCGGTAGGGTTG
TCCCTGGTAGTGATAGTGAAGCCGAGTCCCTTCTCGCCCTTAACGAGCGACACGATGACG
GTCTGAGTGGCGCCGCTCACGTGTTTGCTGCTCGGACTCACGGGAACTTCCAATCCGGTG
ATGGCACGTTCGCTACCCACTTCAGGTAAGAGATCAAGTGGTCGTTCTTGAACGGGATGA
ACGCTCGCCACATTATTAACTCCCGTCACCCATCGGAGCATGTCTTCTACCCTATGGTTC
TGATGGTCATTTAAAGTTGTATCTTGTCCTAATGGTTCCCTTCTCGCGTCCCTCGGTAAA
CTTTTGCTACCGTAACTCTGTATTCTTTCAGCTGCATCTAGCCACACTCCACTCCCCGGT
CCCGAAAACTGCATAGATAACCTATTAGACTGCCTCTGGAAGTGTTGTCCCTGCCTCTCT
GCATTCGATTCTGGAGACCGTCCATCCGACATCGGATGTACTTTATGCATGATTCGGTTA
CAATCATCGCGACCCACCACCGCCGCCGACCAACGCTTGCTTTGATCTGACACCGGTCTC
TGTGGAGGTAATGTATCCTGGTGCAAGGTGGGCTCGCTCCCTCGTCGGACCTGTAGTCCA
TTGACGCCGTCTTCGAGATCAGCCTCGCCTACTTCCACGCACGAGTCCGTGTGAGGAACG
CGCATACTACCACCAACACTTCCGCCTCCCCTAAACATGTCAGGGGAAGCGGTGCCAGCT
GACGACCCACTAGCGCCATCTGCCTGCGCCGCTCTCGGCTGAGGTGTTTGACCAGTGCAC
TCGGCGGTGAGGGTTTCACGGTCGTCGGCGACATCACAAACACGGTCATCCGGGTCTAGG
ATCCCACCGGAATTGGCACGGAGAGCTCGCACTCCTACCCATGTTTCTGGACCCGTTTCA
GCACTTTGCGGCATTATACTCCGCTGTAGCTTTTGCACAGGATATGTTTGCCTCCACCCA
AACAGCCTCACAAGCTTGTCAGCCACATCCTCACATCTCGCTGCGGATTCCTTCATGTTA
TCCACTTCACAAACCACTGTTTATTCCACTTTGATTAATTGCACACTCAGATTCTCATTA
GTTATTCTTACGACAACGTTTTCACTATGAAAATTAATTATCTATGTTTCAAATCGAAAG
ATATTTCTCGAGTTTCACAATAATTTATCTACCGGTTCTTATTACCTAACTCGTTATAAA
AACTCAAATCAAGACGAGCTTTTATTTTCACAGATTTATTTATATAACAATCACACTAAT
TCAAACCACCGAAATATCTTCAGATATTTAAATCGATGTAAACAAACTGGAGGCTGCGCG
GCAAGCAACTGGTTTGGATTTCTG
(3804 bp)

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