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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR21655c1_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_partitioning_defective_3_homolog_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0005547 F phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005923 C bicellular tight junction
GO:0005938 C cell cortex
GO:0006612 P protein targeting to membrane
GO:0007049 P cell cycle
GO:0008289 F lipid binding
GO:0010801 P negative regulation of peptidyl-threonine phosphorylation
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0019903 F protein phosphatase binding
GO:0022011 P myelination in peripheral nervous system
GO:0030054 C cell junction
GO:0030154 P cell differentiation
GO:0031643 P positive regulation of myelination
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0033269 C internode region of axon
GO:0043025 C neuronal cell body
GO:0043234 C protein-containing complex
GO:0044295 C axonal growth cone
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0051301 P cell division
GO:0060341 P regulation of cellular localization
GO:0070830 P bicellular tight junction assembly
GO:0090162 P establishment of epithelial cell polarity
Transcript
Level		FPKM:0.68 TPM:0.66
ORF EntryO_TrvaFAMAMG24815_complete:A_TrvaFAMAMG_TR21655c1_g1_i3
Sequence
(Nucleotide)
GTTTTCGTAAATGGTTAACCAGTACCCACAATATGGAAGAGTATTTCAAAATCTTTCGTC
ATGCCTATTAGACTACAAACAGAGACCGATTCATTAGTCATTAATAAATGAATGTACATT
CGAAACCGATCGTTATAATAGTGATAATGTTAATGATAATGCGATAGTTTCCCGGGTCGT
CGCGGCGGGGCGGTGTCGTATTCGTAGTAGTTGGACTGGGGGCGGCCCCCGTCCCTACAG
GAGCGCTGAGAGTGGTAACCAGCCCCCGTTCGACGACTTTCTTCCTCAGCTTTGGCCCTT
TGCGACTGAACTTGTCTTCTCATCTGTCCGATTTGAACTTCACTTAATTTCTCTCGTCTT
GTATTAAGATTTTGTTGTATTTCTTCGTAGTTTACGTAATGACCAGTCGGACCCCACGCG
CTGTCCATTGCCTGTTGTTGTTGTGTGTTGCGATGCGGCGGCGCGCGGTACGGCGGCGCG
TTGTGTGCGAGTGAGGCGGCGAGTGAGGTGGCGGGGGCCGCGTGGCGCCGCTGTGAGCGC
TCCCCGCTGCCGCTGCTCTGTCGCGAGTGAGATGGCTCCAGACGAGACGGTGGTTGTTGA
TTATCTTCAGCGCGTTCATCGGTTCTATTGTGTCGGTCGAGTGCGTCCCTCGAGAGCGAC
TTCTCGGACGCGCGTCCTGGTTGCGACCGACCGCACTCACCGTCCGACTTCTTATTAGTT
TTACCCATTCTGAACATAGTAGATAATGATTTGAAAAGCGATGGTTTCTTGTGAGAGAGC
GATGACTGCTGAGGAGATCCTCTGATGATTTCCGGGCCTGCATTATCGTCAGTCAACCAA
TGTTTCAACGGTGGGTGCGCTCGCGCATAAATAGGTTCGTTTCTGGGATTCCTTTGGTTT
TCTTGTATAGCTATTTGAAGTGATTCCAAACTGGATGATTTTCTCATACCGAGTGATGGC
CCTACTTGCATAGAATTAACAGCCTTGATTTCCTTAATCTTCTTATAAGTGCCGGTCTGC
TTGGCGTCCATTGCGGCGTGTCGTTTCTCGGACATGGAGCGTCGCCCCACCGCGTCCCGG
CTGAACCCCGCGCCCCCCGCACTCCCCGCGCCGCACTCGCTACCGGACTCGCCGCCGCCG
CTACCCCTCGTCGTTCCATAATCTTCTTCAATAATAACATTATGATGAGCCGGCGGCGAC
CGAGACATGTGCACGTGACCTAGGTTCTGTCTATAATGGTGTCCGTTCACCTGCGGAGGA
TCTATCTGTGTGGCCATATAATAACTCTCATTCCTTAGCCCAGTCAGTCTGTCAATCACA
GGGTTCCATCCATCAAGCCTGCTCCATTCAAAACTGTCCCTTTTACTGTCATGCGGGATC
TCTTTATCCCTTTCTAAATAGCCTTTGGTATCATCAGATTGGTTGGAAACCCAACTATTA
TTGTTGTTTATGGTTACTATGGAAGCGTGTTTTTTAGTACTGCTTCTTGTTTCGTGGTTA
TCGAAATCGTTTTTGTTGTAGTCTGTAGGTTTGTTTTCTTTGTCGCTGTTAGCTGTGTAA
ATGACTGTGTTGAAATGTGAGTTGTCGTTTGAATTTGTTGTGTCGTTTCCGTTTGGTGGA
GTATCGTCTTTCCACCTCGCTAGACTGTCCATACTTTCTGTCCTCCTAGCAATAGTAAGA
GATATGCTGCCAGTCCGCTGAGGTCGCGCGTGTAACAAGGCCTTACGAAGCGTCTCCATT
GCTTCGGCATTAGATTGACCTACCAATGATACTCCATTCACACTGAGTAGCTGGTCGTTT
GTGTGTAATCTTCCATCGCGTGACGCAGCGCCTCCATTTAATACTGATTTGATAAAGATC
CCTAAATCCTGAGGGTCGGGCCCTACAGTCACTTTTCCCTTAACACTAATACCGAGTCCA
GCTTTCTCTGAATCGTGGACCGGAACATCTAGTCGAAGAACTAGACGATTTCTTAAACCT
AACGCAGATCCCGAAGAAGTATTCAAAGCCTCTTGTAGCGCACTATCTGGGCTTAATTCC
TTATTCAACAGATCATCTTTAGAGGAACTCTTCTGTATCCGACCTCTCATCGAGCTGTTC
TGATTGATCGCATTCACCATACTCGAGACTCGACCGTTCTCTGTCACTTCGGGCTTGTTA
GGATCAGTACCTATTGCCTTCTCCGAGTATTTACTGGGACTTTGCTGGGGTTCTACCCTC
TGTGTCCGAGTAGACGCTGCTCTCTCTATAACAATATCGACGGTGGAGTGCGTGGGCGTG
TTCCTGAGCAGCGCGACCACCTGCTGCTGCGTGAGGCCCGACACCGACACTCCGTTCACA
GACACGAGCCGGTCTCCCGCGCGGAGACGACCGTCTGTAACCGCCGCACCCTTAGGTAAG
ATATTTTTGATGTAAATAGGACAGTGTCCTCCGGTAGGGTTGTCCCTGGTAGTGATAGTG
AAGCCGAGTCCCTTCTCGCCCTTAACGAGCGACACGATGACGGTCTGAGTGGCGCCGCTC
ACGTGTTTGCTGCTCGGACTCACGGGAACTTCCAATCCGGTGATGGCACGTTCGCTACCC
ACTTCAGGTAAGAGATCAAGTGGTCGTTCTTGAACGGGATGAACGCTCGCCACATTATTA
ACTCCCGTCACCCATCGGAGCATGTCTTCTACCCTATGGTTCTGATGGTCATTTAAAGTT
GTATCTTGTCCTAATGGTTCCCTTCTCGCGTCCCTCGGTAAACTTTTGCTACCGTAACTC
TGTATTCTTTCAGCTGCATCTAGCCACACTCCACTCCCCGGTCCCGAAAACTGCATAGAT
AACCTATTAGACTGCCTCTGGAAGTGTTGTCCCTGCCTCTCTGCATTCGATTCTGGAGAC
CGTCCATCCGACATCGGATGTACTTTATGCATGATTCGGTTACAATCATCGCGACCCACC
ACCGCCGCCGACCAACGCTTGCTTTGATCTGACACCGGTCTCTGTGGAGGTAATGTATCC
TGGTGCAAGGTGGGCTCGCTCCCTCGTCGGACCTGTAGTCCATTGACGCCGTCTTCGAGA
TCAGCCTCGCCTACTTCCACGCACGAGTCCGTGTGAGGAACGCGCATACTACCACCAACA
CTTCCGCCTCCCCTAAACATGTCAGGGGAAGCGGTGCCAGCTGACGACCCACTAGCGCCA
TCTGCCTGCGCCGCTCTCGGCTGAGGTGTTTGACCAGTGCACTCGGCGGTGAGGGTTTCA
CGGTCGTCGGCGACATCACAAACACGGTCATCCGGGTCTAGGATCCCACCGGAATTGGCA
CGGAGAGCTCGCACTCCTACCCATGTTTCTGGACCCGTTTCAGCACTTTGCGGCATTATA
CTCCGCTGTAGCTTTTGCACAGGATATGTTTGCCTCCACCCAAACAGCCTCACAAGCTTG
TCAGCCACATCCTCACATCTCGCTGCGGATTCCTTCATGTTATCCACTTCACAAACCACT
GTTTATTCCACTTTGATTAATTGCACACTCAGATTCTCATTAGTTATTCTTACGACAACG
TTTTCACTATGAAAATTAATTATCTATGTTTCAAATCGAAAGATATTTCTCGAGTTTCAC
AATAATTTATCTACCGGTTCTTATTACCTAACTCGTTATAAAAACTCAAATCAAGACGAG
CTAGACATAGAAAAAGGCTTCGAAACGTATTTGCAATGGAGCGATCGACGCTTTCTGCGG
TCTCTTCAGTGCTCCGTTATCGCCAACATCGTTATCTGGCTATCACCGCCCCTCCATACA
ATGTACCTTCACTTCCACGCAGAAACACGCCCGCTTTGTCCACAATAGTGAAGCAAGACT
GCCATAATCGCACAAAGAATATAAACAACGAACATTATCCAATAAGTGAAGAAGGCACGT
TTAAAACCAAAACACAACATTACATACTGATAGTGACAACGAAGCACAATATTCCATTAA
CGCTAATTAGAATGTACATGACACACTCTGGTCAATAAGCAAGTAGAGCAAGTAGAAAGG
AAGGGTATCGTGTTTCTTTATATTTGTCACGTTATGATTTATATCGTGAAAATATAAGTA
GGCGTATAATTTACATAGAATGAAATTTAAATTCACTTCAAACTTCTATGTGTATTTTGT
AGAAGAGAAGAACCGCATTTCGTACGAATGTATTTTTTTACAAGAAACCAACTATAATAG
ATTGTAATTTCTATTATCAATATGTTTTATGACTGCATTAATATTACATATTGCAAAACG
TGCAGATGTAATGACCACATTGTTCAGATTAGCGCATAGCTAGCAAAACGTTGACTTGTC
GCTTCGCTTGCAGTCACGCACATAATAACTATGGAACAACTATGCATGTATTCAAATGGA
TGGTACGTATGCTATACTTTATGAACAATTAGTCGATGTATATTGGTACCTTGAAACACT
TCATAATAATCATGTGCATGTGAGACACGCATGAACAAAACACGAAACATTTTTAACGCA
ATTTATTAGAGAAGTCAACGGTTCAGAATAATCTTCTAAATATTCCGGAGAATGCACTGC
GGTTTTCAAAGAAATACAAAATACAAGGAACATTAAGAGAGACTTGATATTAGAAAATCA
CAATACCGTTTCATAGAGCGGATATTAAAATGAAGAATCTAGAAAGTCCCACGACGGTTT
TGATATTATTAAATCTGGTTATTGAGAACAGTGTCATTAACAATAATAATATTAATACCT
ACTCTACTAGACGACGATTAGATAAAGGTAGGCAGTATGTAAAAAATAATGAAGACAGTT
CTAACAAACCATATAAATCTGAAGGTTATTTTTCTTTTCCAATGCATAAAGGCGACAAAT
ACATTATATGTATGACTTTAATTTATACTAATCAAATAGTACAACTACATAATATTATTT
TGAAACTACTTTAATACTAAAAGACAATTATTATGCAACGTTTCTCTAAAGACATACTAT
AAGCACCCTAAATAAAGTTTTCCAACTTCAAGAAAACCATTTTTCCGTCAAGAACCACGT
ATCCAACCTGATATTTGATATAAAAACTAACAGAACAATACACAGTCATTGCATTATCCA
CAACATTACCACGAAAAACAACGGTGCAGGTTTTGTGCAAATACAAAATACCTAACTGGT
ATTGGTATGCAATTTCACTGGTCACAATACCACATTTCAAAGCATCTCTTTCAACATCAC
TGTACACGTGGACGAAAAATATAATTCAAAGACGGTCAAAAACCTTTTATTTTCACAGAT
TTATTTATATAACAATCACACTAATTCAAACCACCGAAATATCTTCAGATATTTAAATCG
ATGTAAACAAACTGGAGGCTGCGCGGCAAGCAACTGGTTTGGATTTCTG
(5389 bp)

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