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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR21653c2_g2_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_rootletin_[Amyelois_transitella]
Ontology
GO:0001917 C photoreceptor inner segment
GO:0003779 F actin binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005814 C centriole
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007049 P cell cycle
GO:0008104 P protein localization
GO:0010457 P centriole-centriole cohesion
GO:0010669 P epithelial structure maintenance
GO:0015629 C actin cytoskeleton
GO:0019894 F kinesin binding
GO:0030030 P cell projection organization
GO:0032053 P ciliary basal body organization
GO:0033365 P protein localization to organelle
GO:0035253 C ciliary rootlet
GO:0045494 P photoreceptor cell maintenance
GO:0051297 P centrosome cycle
GO:0051656 P establishment of organelle localization
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:0.53 TPM:0.52
ORF EntryO_TrvaFAMAMG24800_complete:A_TrvaFAMAMG_TR21653c2_g2_i2
Sequence
(Nucleotide)
GCCATCTAGCGAAAAATGACGTTCCCAGTTGAGTGGATAGAGGATAATTTATCTGTTGTA
GTTTCCATAGTTTTATATTTATTTAGATGAGTCGTAACTATCATTGAGTGGCGGTAGACT
GTGTGTCAATGTGCTGTCCAATTTCCTGGCTTCGTGCTCCAGTGTGTAAGAATCTAGGGC
CGGATCCTGCGACACTGTCCTGAGCGAGTCTCCGAGTGCAGCCCGCAGTCGTTGCACGTC
GCGAGCGGCTCGTCCGCTACGAGACACGTACGACTGACGACGACGGATCTCAGCGGACAG
TTGTGCGCGGAGTTGAGCCGCCTGGTTCTCCAGGCGCAGTATCTGCTGTCTATGGCTGGC
CTCCCTCGCCTCCAGCAGTCTCTCGGCCTGCAGTGCCGCTCGCCTGTACTGCTCGACGTC
GTCGCGACAGTCTGTTCCGGAGAGCTCGCTGAGGTAGCGGCTGCGGGCTACAGCGAGCTC
TGATTCCTTATCAGCCAATTCCTTTTCCAAACGTCTGATCTTCATCCTGAGCTCTCTGTT
CTCCAGCTCAAGTAGACTGAGTTCAGTGGAGAATCCTTTATCCTTGCACGGTATCTCTTT
ATCCTTGTAGCCGTGAGACGAGGAATCTTTCGTTGAATCTGGTCCAGAGTCCAAATCAGA
ATAGTAAACGCTCTTCTCAGTCCTGTCATGGCTCTTGCTCCGGAGCGCCGAGGGTCTGGT
CATCCGTCTATCGGCGTCCATCTTCCTCATGGTGTCGGTGAGCGCGTCGTTCTTGGCCTT
CAGCTCGGATCGTTCCCGCTGCAGCGCGTGCAGCTCTCGCTCCAGTTCACTGTCGTTACT
CTCCTTGCCGTCCCATGTCGTCATGCGCAGTTGGGATTCTAGACCGGATTTGATCTTCCA
AAGTAGAGTTCAGTCGCTTCAGCTCTCCGAGGGCCGCTTTAGCACTTTCCAACTTCTCTG
TCAATACACGACGCTCGTTCTCGCAACTTGACATATTCTTCTGTATATGTCTCAGTTTAT
CGACAGCGTTTTGTTCATGGTTCCTGGCCTCGTTCAACTGTCGTTGTATCTTACTGAGCT
CAGCCCGAAGCTCCGTTTCAGCCGCGGCGGCCCTTTGCAGAGAAGCTGACAATTGTTCCA
CTGTGCCTTTGAGGGAGGTGCAGCGATCTTCCAGCTGAGCTATCGTACGGGTGTAGCCTT
CGCAACGCTCTTGAAGTTTCTTGAGTGCCTGGTCCCTGTCCCTGGCGGCGACGGCGGCGC
GCTGTATGTCTCCCTCCAGCTGAGCGCGCCGCACGTCCAGGCGAGCCGCACGACCTTCAG
CGGCAGCTAATGCTTCTCGCAGTTGACCGACTTCTTGTACTCGCTCAGCTAATTGTACTC
GAAGATTATCCGATTTGTTCTCGTTTTGTACTTTCTCCTCAGTAACGGAGCTGAGCGCGG
CCTCTAAGCTCGTGATCTTGTCTCTCAAGTTGCTGATCTCAACAGTCTTTGATTGCACGG
ATTCATTCAAAGCATTCAACTGCGCTTCCTTCTGCGAGCACGCGGCGTTCAGTTTCGCCT
TCTCGTCCTGCAGCGAGCGGAGGTTGGCGGCCACGCTCTGTAACTTCCCTTCGCCCTTGC
CTTGCTGCTCTGTCGCTTCCTTTAGCTGCTTCTTGAGGACGGCCACTTGAGATTTGTAGT
CATCCTTTTCCCTCTCTATCTGGCACACATCATGCATCAAGTTGCGCACACCCTTCTTGA
TGGACTCCGGATCCACGTCGATGATCTCGTTACGATCCTCCGAGTGATCGCGTCCTCTGT
GCGGGCTGTACCGTCGCGCCGGGCTGGCGAGGCGGCGCCTGGCCCCCACCTGCAGCGAGC
CGTCGGGCTGCACGCCGCACACACACCGCAACGTGTGCACTACCGACGACAGCTTGCTCT
CCGCCTCGCGCTTCCCGCTCTCGCACTGACTGAGAGAGGCTTCGAGAGCGCGGCAACGAC
CTTCGCTTCCTCCGAGACGAGCCTTGAGCTCTTGTATCTGTTGCGTGGCGTCAGCTAGAC
ATACTTCCAAGTTATGTTTGAGCTCCTCCAGTCTGCGTTCCTTGGAGCGGCAGTCTTCCA
AACGGATCACCAATTCCTGATCCCTCGCTCTGCAAGCCTCCTCTAGCTCAGCAGCACGCT
GCCTGGTGGCGGCGAGGTCAGCTCTGGTTCCTTGCAACACAGCTTCGAGTTCAGCGCCGT
GTCGCCGCGCCGCCGCCGCGTCGTTGCCGCACCGCTCGCGCTCCTCGCACTCGTTCTGAA
GTCTAGACTGCAACTCCTTGATATCCTGTTGCGCTTGTTGCAACGCCGCTCGTTCCCGCT
TGAGCTGAGCTTCAGTCGCTTTGAGCGATCGCTGAACATGCTCCCCGCCAGACTCACTCT
CTTTCAACATCGTTTGAACGCGAGAGAGTTCCAACTCTAACGATGTACGGTTCTCTTCTA
GGCCAGCTATCTTATGGTAAGCCTCGTCCCTGGCGCGCGCGGCGTCCCTGCGCTCGTGCT
CGGCTCGCTTGACGTGCTCGCGCAGTTCGCGGCAGCTCGCGTTGTACTTGTCGCGCTCGG
CGGTGCAGTTCGTGAGCTGCCGGCGGACGTCCGTCAG
(2617 bp)

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