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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR21653c1_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		Rootletin_[Papilio_xuthus]
Ontology
GO:0001917 C photoreceptor inner segment
GO:0003779 F actin binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005814 C centriole
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007049 P cell cycle
GO:0008104 P protein localization
GO:0010457 P centriole-centriole cohesion
GO:0010669 P epithelial structure maintenance
GO:0015629 C actin cytoskeleton
GO:0019894 F kinesin binding
GO:0030030 P cell projection organization
GO:0032053 P ciliary basal body organization
GO:0033365 P protein localization to organelle
GO:0035253 C ciliary rootlet
GO:0045494 P photoreceptor cell maintenance
GO:0051297 P centrosome cycle
GO:0051656 P establishment of organelle localization
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:1.15 TPM:1.13
ORF EntryO_TrvaFAMAMG24793_internal:A_TrvaFAMAMG_TR21653c1_g2_i1
Sequence
(Nucleotide)
GGACGTCCGTCAGCTCTTTGCGGAGGCTGTCAGCTTCGTTTTCCAATTCCTTCAATTTCC
GCAATGTCTCCTGCAGTTGCACATAAGCGTTATCGTATTTATCTTCAACGAGCGACAGTT
GCGCTCGAATCTCGGTGGCTTCTCGTTGACACGCCTCCTTCTCCAAATGAAGCTCTTTGA
TGCGATTCTCGTAGCGAGCGCATTCGTCTTCTGCGGCCGCTTTAGCCTCTTCAAGCTTAG
TCTTCAACTGCGCAAGTTCCTCCTTAAGCTGGTTGATATACCCACGGTCCTGGTCGGAGC
GAGCTTGTCCGTCTCGACGACACCGCTCTAGCTTGTTCTGTTCACAGCACAACGCGCGTT
TCAGCTCTTCGAGACGCTCTATTAATGCTTGCTGTTCTTGATGGGCCATAAGCAAAGCCT
GTTGTTTATCGTTCTCAGCTCTAAGCATGGCCTCGTCGTGTTGGAGTATGAGTTGGTCGC
GCGACGCCAACAGTTTTTTCTCTCTTTCCCTCGCGCTGGCCTCGCTAGCTTCCTTCTCGC
TCGTGAGTGACGCTATCATCTGATTCAACTTTTGTTCCAATGTTTGACGGAGTTGTTCCT
TTTCCTCTTTAAGTTTAGTGATGTTCTCAGCGGTAGTTCGGTTGATGTTGGTGATGATCT
GTTGGTACTCAGCCTCTTTCTTCCCGGATTGTTGTTGCATCGAGTTCTTAGTCTCGCGCA
GTTTACGTTCGCTACTTTCCAGTTCTTTAGTTAGACGGGCTATTTGACCTTTATAATTCT
CCTGTTGCACCAACGTGTCCTGCAACTCTCGTTCTAATTTATTTCGTTTATTATCCGTAT
CCTCGAGCATATTGGCCGTGTCGAACAGAACAGCTTCTAAAGCATCCTTCTCGGATCTGA
CGCTCGCTAATTGTTCTTGTAAATGTTGCTTTTCTTTTTCCAGGGTGTCTATTAACATCT
GTTTCTCCTCCCCGTCCTTGACGTGTTCCTCGAGCGCGCGGTTGACCCTGCCGATGGTCT
CGTTGGCCTGCTCGAGGCGCTGCTGCAGACGGATCATCTCCTCGTTGAGCGTGTCCTTCT
TGCGGACCATGGATGTTAGTTGGGAGCTTAGCTCGCCGCGTTCTCTGACAACCTGACGTA
ACTCCAACTCCACTTTCTCCCTCTCCCCTTCAAGGAACTTGATCTTCTCGTACAATGAGG
ACTTGTCAGCGTCCAGCTCCATCCGATTCTGTTCGGCAGCCAACAACTCCTTACGAAGGG
AGTTCAGATCGCCTTGTTGCTCAGACGATTGATTCGACAGAGAAGATTTCTCATCTTCCA
AGTTCTTAACATCCTCCTGTAGTTTCTTCTTGTCGCACTCCAGGTTCCTGATGGCCCCCT
GAAGCTTTTCCACCAGATCTTGGAGATCACTTCTCTCTATTATAGTACGCTCGAACTCCA
TTTCCAAGTCACTTCGATGTTTCTCCATTTGCGATAAAATGGCGTCTGCTTCTAACTTCT
GCTGGTCGAGCAGGTCTCTGGACAGCGCTATCTTGTTGAGCTCCTCTCGTACTGACACTA
ACTCAGTTCGGAGACGAGACGAACGCTCCTCCTCTCCTCTGAGCACAGCATCCCTGTGTG
AAGCCTCGCGATGCAGTCGGTCCACTTCAGAAGACAGAGCTCTCTTCTCTCCCTCCAAAC
CTTCGATAGTTTTCTCGAGACGAGAATTTATCTTTTGAAGTTTCTCGTAGTCTGATGTTA
ATGATTCAACCATAGCGTTAATCTCGACTCTGTTCCGTTCCAAGTTGTTTTTATCGATTC
TCAGAGTCTCGACTGTCTTCTGAAGCGATTCCTTCTCTTGTAAAGCTTGACTGAGATCCG
CGTTCGATTGGTCAAGCTTGTTTTGTAAATCTTGTACTTTTCCTTCAAGCGAGTGTATGT
TACAGTCGGCCGTTTCACAATGTTTCCTGTTGCTCAGTAGTTGCTCGCGAGTATTTTGCA
ACTTCACCTGCAATTCGTGTATTTGTATTTGGTATTTGTGTAGCGCGGCCTGCACCGCCG
AGATGGTGCTCTCGGCGAACGCAGTCGCCGCCGCCGTCTGAGACACGCCGCGCTTCGGTG
AACGGTCGGGCAGGTGCAGATGCGCGGTGCTGGCGTCGGGCTCGGAGTCGTGTATGAGAG
CGCGCGCCACCTCCTCCAGCGCGCCGCGACACACCGCCGCCTCGCCACACGTCGCCTCGA
GACTCTCGCAACGCTCCTCCAATCCCTGCAACTCCCCAAGCAGACGTTGTATCCGTGCGT
CGCGCTCTCTCAGCTCGGCTAATGCGTGTTCCCGTTGTGACGTCACTTCCCGGAGTTCTA
CACGAAGCGTCTCCACCGTTACCATGGCACCCGACGATGGTGCCGATAACAACATCGCAG
GAACTTGGTTGCAAATTTGGGGATCGGACTTAGTCCCTTGAGCAGCAAAAGCGTTAATGG
CATACCCGCTCAGAGTACCGACAAGATCCCTCACAGACGAGTCCAGGTCGTTCTTGACTC
GGTACAGGTCCCGTTCAGTGTTGGACTGGAGCTCGGAGAAGAAACGCTTCACGGAGACTA
CCTCACGCCACAGACTTAGCAAGCGGTTGTGTTCACTTGAATAGTAGTCATTGAAGGCCT
GTTCCTCATCCTTCCACTCATCTTCTTTAACAGCCATCTCATCTCTCAAAGCCTCCCAAT
CGTTGGTCAGCTTCTGCAAGTCATTGGTAAGAGCCTCGTTCAGCTGGTGGGACTCTTCCA
GCTGGTCTCGGAGGAGATTGTTCTGGGCCACCAGTTTCTCACACTTGCGTTTCTCCTCGT
CCAATCTACGCAGCGCGGTCTCCAAGTCATTAATACGTTCATCTCTCCGCGAGTCGGTGG
ACGGCGGCGAGGACGCGGGCAGAGCTGACTGTACTGCGCTGGGCCGGTACACATCGCTGC
GAGGAGTCTCCAGCATTTGGTTCTCGAGTTCGGAGCATCTTTGCTTGTATTGCAGAACCT
TAGCCTGGAGTCTCGATACTAAAGCAGCTTGACCTTGTTGTGCGCGGCGATACGCATCGA
GACGACGCTTATGATCAGCCGCCTCACCAGCAAGGCGTGCACGAAGCTCTTCATTCTGAC
GCCTCAAGTCACCACCAACGCTTCCAATAGGAGAGTCCATTTCCGGTGGGCTTTCTGGAC
TCTTCTCCTTCTTCATGCGTTGATGAGGAAGAATACTCGGAGTTCGTCTTCCGACCGGAG
CGCGAGCACTCCGTGGAGTAGTTAGAGTATCCCTCGCTGGTAACGGCATGTCGAGGTTCC
TTAGCCCGCGTAGTACGCCCTCCGCGCCCGCCG
(3333 bp)

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