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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR21624c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_histone-lysine_N-methyltransferase_SETD1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000791 C euchromatin
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008168 F methyltransferase activity
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0032259 P methylation
GO:0035327 C euchromatin
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0044648 P histone H3-K4 dimethylation
GO:0046427 P positive regulation of receptor signaling pathway via JAK-STAT
GO:0048188 C Set1C/COMPASS complex
GO:0051568 P histone H3-K4 methylation
GO:0080182 P histone H3-K4 trimethylation
Transcript
Level		FPKM:6.45 TPM:6.32
ORF EntryO_TrvaFAMAMG24580_5prime_partial:A_TrvaFAMAMG_TR21624c0_g1_i1
Sequence
(Nucleotide)
TTTTTTTTAAAATTGTCGTACATTTATTTACAAACTTACATTTTAAATTACACAAAGTGG
AATCCAGAAAGTTGAGAGTTAATTTAACTAATCATTCTTTATTATAATAATATATTATTA
TTCTTCAATCAACTTTCCAAATTAATAAAACGTACCTAACTACACAACACCAATCATAAG
ATAGACATTTCTTCTGAAATCCATTTGATTACAAGATCATGTACTTCATTACTGTACTAG
CATGTGGTGAAATAGCAGAGATCTTTTTACACAAACAATTTACAACACAATACAATATAC
AAGTTTTATTACTTTATTCGACATTCTACGTTAGTCAATCATATCTTTAGATTCAGTCAA
AATAATAATATAATACAATGAGGTTTCAACTACAATACACTGGGCCATAGCATGCCTGCC
TTCGATTCACAATATTAAATGGATGTATTAAGCTGAGCACAAAATTGGAATATTTTACTA
TCTAGACATGTCTAAGTAAATAGTCATTATAAAAACACAGTTAAATGACTATTATTAAGA
ACTATACAATATTCGATCGCGCATATGAGGTACAGACATTTCAGAAAAAAATCTTATTTC
TTAGTCTATGGTTATACTAATACGCACCATTTTAATACACATACTACTTAAAATTTTTGA
AATGCTAAGATTCTAATTTGTGATACAATCCAGTATGCAACATCATGCTTTAGAGTTTTA
TAAGTTTGCAGAATTGTTGGTTACAATAACGTGGGCAGTGGCGTACATGTCTATTTCCAC
TCAGGATATGCAGAATGTAAGATTTGATCCATTTGATTACCTTTTTATGTTAAATGCATA
CAAATAAAGAGAATGTGCAGTGTATATCGTGTGTTATTATATTAGAGTTATATTAGTATT
ATATTAGAGTTTGACAAGTTGGGGTATGTAATGCATATTTGCATTTATAGACCGCACGCC
ACTGAATATAAGCTTATATGAAGGTATTTATATTTTCAACTAATGTCGCCTGTTTTTACG
TTGCATTAGATAATAGGTAATGACAGCTTATGCTGCCAAAAGGAACAATACATTTAAATT
TCAGATTTAAAGAAGTACTCAGCGAATCTGCAAAGATTCTGGGTTTAAAAAAACAGAGTA
GAACTAATAGTACTTACCTTTGGTTATATAATCGAGATTTAAAATTGTCTGTCTGACTGA
ATAATACAAAAAACTACAAATATCTTTAAATCACTAACTCAAGAGCATCAAAACGCGAGT
TTCATGACCCATAATACAACATTTACAAAATTTAATATAAAATTGTTTATTTTCCAATAT
GATTGAGCGTAGTTGGAGGCAGATATAACGAGTGATACAATATGTACATGATTTTAATTG
AGGAACCCGCGGCACTGCGCGGCGCCGCACAGACACGGTATCTTCTCGTCTTCGAGCGGG
AACTTGTAGTCGTAGGTGATCTCCTCATCAACGCCGATCGGTTGTTTTGAATATATCACA
ATCTTCTTTTGTGACTCAATAGTTATAATTTTAGCGTAGCAATTCGGATTACAACTGTGG
TTGATGAACCGGGCGAGGTTCCCGCACTTGGTGGCGTCGATGATGGTGTCGAGGTCGATG
CGGAACAGGTATGAGCTGCCGATGCCGGTCGCCTCGTAGTGCGCCTCCCGCACGTCCGCC
ACTATCGGACGGATCATCTGACCCACGTACTCTATCACCATCTCGTCCGCTGCTATCGGC
TCCTGAGCAAATAGACCCCAGTCGTGGATTCCAGATTTTGCAAACTTGAGCTGCTTCTTT
CGGAACTTGAGCTGATTGAATTTCAGAAGATCAGAATCTGTATCAGTACCAAACGCTGTA
AGTAATCTCCTCTGGTTAGATCTGGCCTCTCTGGAGAGTAGTTGCATTTTGGAAGCTTTC
TTATCGTCTGGTTGCGCCTGTATGGCGGCGGCGGTGGTGCGGCCGTGGTGGTACTTGTAC
TTAGCCTTTATCTTCGCATCTAACTTGTAGTAACCCTCCGTACGGGCTGAACCACTTGAG
TGACCCTGTAAATCCTCGTATATGTTGTTGTGTCGCTTGGACTTCTTCCTGGGCGGGCCG
TAGAGCACGTCGGTGGGCGGATGGTCGACCCAGTGCGTGTCGTTGAGCCAGTAGCCGTGC
GCGTCGCCGCTGAGCAGCTGCTCGTAGGCGCGGCGCAGGTACTCCACGTCCTCGCGGTCG
ATGCCGCGCGTCAGGAACTCGTACATCACGGTCATCTCCGCCATGATCTCGCGCGCCTTG
AACTGCACGCTCGGGAACGACGGCTCGTAGTCCGACGTAAGGGAATCGTGAAGTTTATTT
TGTATTTCTGATAATTTCTTCGTTTCATGTTTCCGCTTGTAAGGTCTTTTCTCTTGTAAA
CTTGAAGATTCACTTTTGGGCGGATCGGCGACCGGCGATGTGCCTTCCGGCTCAGCCATC
CATGTGTAACCGTGGTCATGATGTAGATGGTTGGAGAGCCTGGGCTCGGCGTCGGGCGGC
GGGCGGCAGTAGGAGTGGTCGAGCGCGACCTGCGAGGCCTGGGACGCCTGCGACAGCTGC
GACGCTTGTGACGCCTGCGACGTCTGAGACTGCGGCGACCACGTCTCCGACACGCCGCTA
CCTTCCTTAACGCCATTAACTCCAGCTGCGGTCTCGGTGTTGCTGTCGCTAACGGAGATG
ACTCGTTGTCGTTTCTCCGTCTTCTTGGAGCGTCGTTCCTTCTTCCTGCGGTTCTTGAGC
GTTTCGTCCTCCGAAGTGATTTCGCCATCTTCTACTTCCGTGTCCGGTTTTTTCTCGGGA
GTTTTAACGTGATTCTTGACGGGGCTGCTTAGTGATTCATCCGGCTTACTATCTGGTATG
CTCTTGTCGGGAGGTTTTTCAGGTTGTGGTTGAGTGTCAACTTCCATCGTTTTCCGTTGT
TCTTCTAGGAACTCTCTTTCAATCTGTTCCATATACTCTGTATTTCGTCTCCTTCTCTCC
TGATATTCTCTTTCTTCTTCAGAATCAGAGTATACTCTATCAAGTATTAGATCTCGAGGT
CCTTCAGGTGACATGATAGGTGATCCTAGTCTCTCTTCCGTGTCTGATGCTTCTACTGGT
GGTATTGGAGTTTTCTCTCTCCTTCGGCTTTCTTCCTCACTATCAGAAGACGAATACACT
CGCCTTAACCTCTCCTTATTTGACACAACCTTGAGCTCTGCCTCATCTAATTCTGAATCA
TCATCAGTATCAGAATATATTTGAGGCGCTGGTCCTTTCCGCTCTGTTTCTGATTCTTCT
GACGACGACCTACTTGACGATGATGACGATGACCTGGATGAGCTGCTAGACTGTCGCCTC
CTACTTCTAGACAAGTATGATCCTGTGCTTCTGTTCCTAGGACTAGTTGGTACTTCTTTC
TCTTCATCAGAATGTTGCACCATTTCCTCCTGATCACTGAGTCGTTTGGAGGAGTCGTCG
TCCATGGTGACGGGCGAGGGTATCTTCCGTTTCTTCCTGAAGCTCGGCATCTTGGGTATG
GCGGCGCGCAGGCCCAGCCCGATGCCGACGCCGTACCCGCCCAGATCTAGGCCCAGCTCG
CGAGACTCCATTATAGACTTTATAGAATCCATCGCCTCTTCTTTCTTATTTGAGATATCC
TGCAAAGGTTGATTGTCTTCCTTGGGTTTGACTTGTCTCATCTTTCTACTCTGTTCGTCC
CACCAAACTTCGAAGTTTTTGAAGGCAGTATTTTCTATCATTTTCTTATTGAAATCTTTT
TTTAATATTTGTTTCAATTCCGCAGTTACTCGTTCTATTACACTGTTGATTGTTGCAAAA
TGAGGATTATCCAGTTCCTGTGCGTGTGCGTGCGGCTGCGCGTAGTTGTAGTGCGGCAGG
CCGGGCGGCAGGCCGGGCGGCGGCGGGAAGCCGG
(3934 bp)

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