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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR21620c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		reverse_transcriptase_[Bombyx_mori]
Ontology
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:5.96 TPM:5.84
ORF EntryO_TrvaFAMAMG24569_5prime_partial:A_TrvaFAMAMG_TR21620c0_g1_i1
Sequence
(Nucleotide)
GCGGCGTGGCCATCCCCGCCAGTTGCATTTCATAGAATTCATATCGATTTTTTAGGCCCG
ATACACAATTTGAGTTTTCTTGTAATTGTAGACGCGTATTCCAAATGGGTAGAAGTATAC
AAAATGAGTTCTTTGTCGACAATGGCTGTAATTTTAAAACTTCAAGACTTTATATCGCGA
TTTGGATTACCGCATACATTGGTTAGTGATAATGGCACGGCGTTTATTTCGCAAGAATTC
GAATCATTCTGTAGAAGTAACGGGATCATACATGTGACGTCACCCACTTATCATCCAGCC
AGCAATGGACAGGCGGAAAGCTTCGTTAAAATAATTAAAAAGGGAATAAAGTCGAGTTTA
ATAAACAACGACAATGTAAAAAACAGAGAATCGATTTTACTCAAATATTTGTTTGACTAT
AGAAATTCTATTCATTCCACGACGGGGTTTTCGCCTGCCCACCTGGTTTTTGGACGCCAA
CTTCGTTCGCGTCTCGATTTAGTGACTCAACCGACTCCGCCGTCAGCTTCGTCTTCCCTC
ACTAACAATGTGCAAAAACAACAGTTTTCGCAGATTAATAATTATGGCGGCAAAAATAAA
CAATGTTTTAAACCTGGGGACCTTGTTATGTACAAGAAAACACAAATAAAAACAAATTAT
AATAGTAATAAGTCATGGTGTTCAGGGACTGTAATCAAAAGGATTGGACGTACAATATAT
TTAATTAAGGACTGTTCAACTGGTCAAGTAGTGAAAAAACATAAGGATCAGATCATACAC
AGGACTTGTTCAGACAGCCATCTTCCGTCGACCGACAATTATTTCGACGCGGAGGACTTC
ATGTCACCCAACACTACAAGTTCTCCTACTGTAACCGATACACCGACAGACCAGCTGCAA
GATGGATCACAACAACCTGTCACGCCATTATCGGAGACAGTAGTAGAAGAACAGGAGGGG
GAAGAGGAGCAAGCCATAGGACTTGACTTAGCTCAAGGCGATGAAGAACAATTTCAGGAT
GCAACGGATTCCGATCAAGCAGAGGCTATGCAGAGAGCTCCAGGAAGATCAAAGCGAAAT
GTACCCAAAGTAAATTACAGGCAGTACTTCAAATAACATAGATAGGTTATTCCCAGTAAC
TATCTTTGAATATATATACTAATATCGTTACAAATTAAGAATAGTTAAGTTAGTTGTTAA
TATTAAGTGTTATAGTTAGTATTACACATAGTTAGTATTAAGTAAGTAAATAGCGTTTAA
GTTAGGAACTAAGGGGAGGAAGTGTTACATGTATGCATGTAGTTGTGTCCTCGCTTGCAT
GTATCATTCGATGTAATAAACTCAGTGCACTACGAACCGTCTTTCACTTCGCACCTACGT
TCGAATACATAACAGTGGCGACGAGCTACCCGCGTTATTTAAAGTATATCAGTACGTAAT
CATGAAAATGGCTCAATTTGGAATTTTAAATAGCTTCGACCACAGAACACAATCGTGGCA
GAATTATAAAAGTCGGCTAAATCAGTGGTTCATTGCTAATGACCTGGCGAAAAATGAAGT
GAAGATGAGAGCTATCTTGCTCAGTGCACTCAATGAAGAGACGTACCAACTCGCAGCAGA
CTTAGCGTTACCCAAGGACCTACAACAAGTACCATATGATGAAATAATATTATTATTGGA
TAATCATTTCACACCCAAAAGAAAAGGGTTCGGCGATCGTTTCGCATTTTTCGCTGCAAC
TCAGCGGGTAGATGAAAGCTACACGCAGTGGTCGGCGAGGCTGCGAGGATTAACGGCACG
CTGCAATTTCTCGAACGTGGAAGAAGCGTTGCGGGACCGATTCCTGATGGGGATGTCATC
TGGACCAGAGCGAGAAAAGCTGTTCGCGCTGGACCTGGCGGAGCTGACCTTGGCGAAAGC
GGTGGATTTGGCAGACAGCATGCGTAATGCGCGTGCTGTAACAACGTCAGCAGTGACAGC
GGCCGAAGGGCCGGCGCCTGCTGACCAGCTATTTAAGATCGCCGGTAGTGCTAAAAGTGT
CAGTGCCGGGAAAAAAGAGTGTAAAGTGTGCGGTTTTAAAAATCATGATACGTCTGAATG
TCGTTATTCAAAATTAAAGTGTCGAAAATGTAATAGGAAAGGCCATTTAAGTCGTGTTTG
CTCAAAAATTAATTATGTTGTAGGCATGGAGGAGCATGAGGAGGACGATGATGACGGTGA
GGTGTTCATTATTTGTTCATCGAACGGTGAACCAATGACGGAAACGGTGTCAGTTGAGGA
AGTTCCGATGAAGTTCCAGATCGATAGTGGGTCGGCAGTCACAGCTATATCTGAGGTTGT
ATATCGTAAATATTTTAAACACGTGCCATTATTACCAACTAATAAACGTTTGTTTACATA
TACAGGCGAAAGTATAAAATGTGTTGGTTTGGTAAAATTACAATTCAAATATAGAAACTT
GAGGCGCTTATTGAGTGTGTTCGTAATTCGCAACGGGGGGCCGCCAATAGTGGGCCGCGA
TTTTATCTCTCAATTCGGTTTTCAACTGCTAAGCGTTAACTATTGTGAAAAATCATCCGA
ATTTCTTAATCAACTGTCGACGCAATTTCCGTTAGTTTTTTCCAATAAGTTAGGGAAATT
TAATAAATATAAAGTTAAATTGCATTTAAAGGATGACGCGAAGCCAATATTTAAAAAAGC
GCGTCCTGTCGCGTACGCCTTAAAAGATAAAGTTAATGCCGAGATAGATCGATTGTTAGC
CGAAGGAATCATCAAACCGGTTTCTTATGCAGAGTACGCGTCACCGATAGTGCCCGTGTT
AAAGCGAAACGGCTCCATTAGGTTGTGTGCAGATTATTCGTGCACTATAAATAAACAACT
CAAAGTAGATCAATACCCTTTACCTACTGCGCACGAATTATTTAGCAAACTTCATGGAGG
ACAACAATTTTCTAAATTAGATCTATCACAGGCGTACACACAGTTTGAGTTAGACGAAGG
CTCACAGAAGTTCACGTGCATTAACACTCATCGCGGCATTTTTGCTCAGACTCGTTTGGC
GTTTGGCCTCGCCTGCGCACCGGCTATCTTTCAACGCGCAATGGAGGGTATACTTTCCGG
AATGGAAGGCGTTTTGTGTATGCTCGATGACATATTGGTTACGGGAACCAATAAAACCCA
ACATAAAGAAAGATTAATTACGGTACTGTGTAGGTTACAAGATGTAGGATTAACGTTGCA
GCGAGAAAAATGTGAGTTTTTCAAAGATGAAATTGATTATCTAGGATACACAATAGACAC
AAACGGTCTAAAAAAATCTCAAAAAAAGGTTGATTCTATTAAAAATGCATTAGCACCAAA
CAATGTTACTCAACTTCAATCATTTTTAGGGTTAGTTAATTATTATCGTAATTTTATACC
GCGAGCATCATCAATACTTTCTCCGCTATATGATTTATTAAAAAAAGGTATTAAGTGGAC
CTGGACTAAAGAGCATAATAACGCGTTTTGTAAAATCAAAGAATGCTTATCATCTGAGCA
GACGCTCGCTCATTTCAATCCGCGCGCGCGCATCATTCTGACGGTGGACGCGTCGCCGAC
GGGACTCGGCGCAATATTGTCACAGGTCGATGAGTCTGGCGTTGAACAACCGATATCTTT
TGCATCGCGAACTTTAAATAAAGCGGAAAAAAATTACGCCCAAATACAAAAGGAAGCGAC
AGCTATCATTTTCGGCGTACGTCGATTCCATCAATATTTATATGGCAGAGATGTACCTTT
TGTTCTTCGCACAGATCATAAACCTCTCGTATCAATTTTTGGACCGTATCGCGGGGTGCC
GGAAGTGTCGGCTAACCGGTTGCAAAGATATGCAATGTTTTTAGGAGCGTATAACTACGC
TATTGAATATGTAACAAGCGCCGAGAACAGTGCCGATTATCTGTCTCGCTCATCGGTGGC
TGAAGATAGCAATGCGAGAAGTACAGTAGTAAACGATAGGGCAGCGTACATCAGTTTTGT
TGTTGATTCAACTTTACCCGTAACCCGATCATTACTACAGAGTGAAACAGCTAAAGATAG
CTTATTAACGAAAGTTAAAAAGTGCGTTTTACACGGTTGGCCTCCAAAAAACACTGATAT
TAATTTAAAACCTTATTTTTTATGTAGGACGGAATTATCCTACGAAAACGGGTGTATAAT
GCGGGGCCATAAAGTCGTCGTACCAAGTAGCTTAAGACATCGTTTTTTAATGGAAATACA
TAAGTCTCACTTAGGCATTGTGAAAACAAAAGCGGAAGGTAGAAGTCGATTTTGGTTTCC
AGGTATGGATAAAGCGATTCAGGATATGATTACTAGTTGTGACACTTGTCTGCGGTTACG
GTCACTTCCAGCGCGTACCCCGCTCGCGGCGTGGCCATACCCGCCAGTTGCATTTCATAG
AATTCATATCGATTTTTTAGGCCCGATACACAATTTGAGTTTTCTTGTAATTGTAGACGC
GTATTCCAAATGGGTAGAAGTATACAAAATGAGTTCTTTGTCGACAATGGCTGTAATTTT
AAAACTTCAAGACTTTATATCGCGATTTGGATTACCGCATACATTGGTTAGTGATAATGG
CACGGCGTTTATTTCGCAAGAATTCGAATCATTCTGTAGAAGTAACGGGATCATACATGT
GACGTCACCCACTTATCATCCAGCCAGCAATGGACAGGCGGAAAGCTTCGTTAAAATAAT
TAAAAAGGGAATAAAGTCGAGTTTAATAAACAACGACAATGTAAAAAACAGAGAATCGAT
TTTACTCAAATATTTGTTTGACTATAGAAATTCTATTCATTCCACGACGGGGTTTTCGCC
TGCCCACCTGGTTTTTGGACGCCAACTTCGTTCGCGTCTCGATTTAGTGACTCAACCGAC
TCCGCCGTCAGCTTCGTCTTCCCTCACTAACAATGTGCAAAAACAACAGTTTTCGCAGAT
TAATAATTATGGCGGCAAAAATAAACAATGTTTTAAACCTGGGGACCTTGTTATGTACAA
GAAAACACAAATAAAAACAAATTATAATAGTAATAAGTCATGGTGTTCAGGGACTGTAAT
CAAAAGGATTGGACGTACAATATATTTAATTAAGGACTGTTCAACTGGTCAAGTAGTGAA
AAAACATAAGGATCAGATCATACACAGGACTTGTTCAGACAGCCATCTTCCGTCGACCGA
CAATTATTTCGACGCGGAGGACTTCATGTCACCCAACACTACAAGTTCTCCTACTGTAAC
CGATACACCGACAGACCAGCTGCAAGATGGATCACAACAACCTGTCACGCCATTATCGGA
GACAGTAGTAGAAGAACAGGAGGGGGAAGAGGAGCAAGCCATAGGACTTGACTTAGCTCA
AGGCGATGAAGAACAATTTCAGGATGCAACGGATTCCGATCAAGCAGAGGCTATGCAGAG
AGCTCCAGGAAGATCAAAGCGAAATGTACCCAAAGTAAATTACAGGCAGTACTTCAAATA
ACATAGATAGGTTATTCCCAGTAACTATCTTTGA
(5554 bp)

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