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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR21618c1_g3_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_talin-1_[Bombyx_mori]
Ontology
GO:0001726 C ruffle
GO:0002576 P platelet degranulation
GO:0003779 F actin binding
GO:0005178 F integrin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005925 C focal adhesion
GO:0006928 P movement of cell or subcellular component
GO:0006936 P muscle contraction
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0007043 P cell-cell junction assembly
GO:0007044 P cell-substrate junction assembly
GO:0007155 P cell adhesion
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016032 P viral process
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0030274 F LIM domain binding
GO:0030866 P cortical actin cytoskeleton organization
GO:0032403 F protein-containing complex binding
GO:0032587 C ruffle membrane
GO:0036498 P IRE1-mediated unfolded protein response
GO:0042995 C cell projection
GO:0051015 F actin filament binding
GO:0070062 C extracellular exosome
GO:0070527 P platelet aggregation
Transcript
Level		FPKM:10.28 TPM:10.07
ORF EntryO_TrvaFAMAMG24554_3prime_partial:A_TrvaFAMAMG_TR21618c1_g3_i1
Sequence
(Nucleotide)
GAAAAAATCAATAGCGGTCGTGTTCTTCTTACTCCTTGACTAAACTTAACTTAATAACAA
CGTCTAGCTTGAATATAAACAACAATAGTATTTTAGAAGTTTATTTACACAGTTTCGCTT
AAAATAACCGATTTTTAAGTGTGGAAATCTGTGAAAATTCAATTTCTAGCGCCGTGAAGG
TAGCCGCAAGTGTTCAAAGCACTAAAACCCCCTGTAGATGGCGCATTAGTACTCGTGATG
TTGTTACACACTGTATGGGCGTTTAAGTGCACAGTGAAAAATTTTCGTGTTTTGTGTTAA
ATCGAGTGCTAAATGTAAATCAAAATTGGTACAAAAGTGCGATGTAAAGAAGACAGCTAC
AAAACCAAGAAACTAGTGCCTTATTATTAATTAAGAAAACAATTAGTATTTACAAGATTT
TATTGAAACGAACGAAAACTACGAGCGATACGATACAAAACGAGGGTCTACCATCGGAAG
CGCCGGCGGTGTCGTGACGGATCCGGCAGAGGGTCCAAACAGCGTTACAGGACAACTGGA
GACGATTGACCACTCGTACTGGTCCCTCCCCGACCAGGACTCGTCTAAGATCGTTCAGCA
CAGAACGACACCCAAGACGAAGCAGTGCACCTTCTCTAGACCTTGATTACAGACCAGACA
ACACTGCGTCTATACACAAAACACGATCCCTCGTCAAGATGGCGACGTTATCGCTGAAGA
TATCCATCGACGGAGGCAAGGTTGTGAAGACCATACAGTTTGAGCCTTCCACCACCGTGT
ACGATGCCTGCCGCATCATCAGGGAGAAGATCCTTGAAGCTACTGCCGGGGACCCCAAAG
AGTATGGGCTATTCCTGGCTTCGGAGGAGGATAACAAGAAAGGCATATGGCTGGAGGCGT
CCAGGAGTCTGGACTACTACATGCTGAGGAACGGAGATCTGCTCGAGTATAATAAGAAGA
CCAGGAACCTCAGGGTCAGGATGCTGGATGGTACTGTCAAAACTCTTCTCGTGGACGACA
GTCAGATAGTCGCCAACCTCATGGTGGTGATCTGCACCAAAATTGGCATCACTAACTATG
ACGAATATGGATTGGTCCGTGAAGAGTTGAAAGATGAACCGGATCCGTGTGAGAGGCCCA
ACTACGGCACCCTGACCCTCAAGAGGAAACATCAGGAGAAGGAACGGGATGCCAAGATGG
AGCAGCTCAGGAAGAAGCTGAGGACTGATGATGAAGTAAACTGGGTGGAAGGCTCCCTAA
CCCTCCGCGAGCAGGGCATCGAGCCAGGAGAAACCCTACTCCTGCGCCGGAAGCTGTTCT
ACTCGGACCGGAACGTGGACTCGCGGGACCCGGTCCAGCTGACCCTGCTGTACGTGCAGG
CCAGGGACGCCATCCTGGCTGGCGCGCATCCCACCACGCAGGAGAAGGCTTGCGAGTTTG
CCGGAATACAGTGTCAAATACAATTTGGTGACCATAGAGAAGATAAACATACAACAGGAT
TCCTCGATTTAAAAGAGTTCCTGCCGGCATCCTACGTGAAAGTGAAGGGGATTGAGAAGA
AAGTGTTCAAAGAACACAAGAAACACGTCGGTTTGAGCGAGTTGGACGCTAAAGTACTCT
ACACGAAGACCGCGAGGGATCTGAAGACTTATGGAGTAGCTTTCTTCCTTGTTAAGGAAA
AAATGAAGGGTAAAAACAAGCTAGTGCCTCGTCTCCTGGGAGTCACGAAGGACTCCGTGC
TGAGACTTGATGAGAAAACTAAAGAAATTCTGCAGACCTGGCCACTTACCACCGTGAGGA
GGTGGTGCGCTAGTCCTAATACATTTACACTGGATTTTGGAGATTACAGCGATCAATACT
ACTCAGTTCAGACAACGGAAGCGGAACAGATATTACAAGTGATAGCCGGCTACATCGACA
TCATCGTGAGGAAGCAACGCGCCAAGGAACATCTCGGGATTGAAGGAGATGAGGGGTCCG
CCATGTTGGAGGATTCTGTGTCGCCTTCCAAAGCGAATATAATCCAACACGACACGTTCA
AATCGGGTAAAGTGAACACGGAGTCTGTCGCCAAGCCAGCCGTCCATCGTCCCGGAGCTG
AAGGGGCGAAGGTGTTCGCTGTCGGCCACGTGACCGGCGCCCAACAAACCACCGTCTCCG
GACAGATCATAACCGGACACACGTCTCCAGCAGCATCTCAAATTCAGCAGACCAAAGTAA
CGTCGATATTGACAGAGCCACAGCGAGCATTATTGACCACCATTACAAGTGGAAGGGAGA
TTATTAAGCAAACAGAAGAGGGACTTAGCAGGACAACCCTACCCGAGTTGGGCGGTGACG
CTTCTTCAGTGAAATGGAAGCAGTCAACATTAGACACAAACAAGCAAGCCGTCAGCTCAC
AGATAGCCGCCATGAACGCAGCCACGGCGCAAGTCGTTACTCTCACTGCAGGCCCAACAG
AAGAAGTAGACCACACAGCAGTCGGAGCAGCCATCACGACCATCACCACCAACCTGCCAG
AAGTAACTCGAGGAGTCAAGATGATCGCCGCACTGATGGACGACAGCGACAACGGTGACC
GTCTGCTGGACGCCACCAGGAAGCTGTGCACCGCTTTCACTGATCTGCTAAAGGCGGCCG
AGCCGGAGACTAAGGAGCCTCGTCAGAACCTCCTGAACGCAGCATCCCGCGTCGGAGAAG
CATCCACGTCGGTTCTCTACACCATCGGCGAAGAAACCGAACAGGACAAACAGACACAGG
ACATCCTGTTGTCTCTGGCCAAGGCCGTAGCCAACACAACAGCAGCTTTAGTCTTGAAGG
CGAAGAACGTAGCAGCCCAATGTAAAGATGATCAGCAGTTGCAGAACAACATCATTGCAG
CGGCTACTCATTGTGCGCTCGCTACTAGTCAACTTGTGGCTTGTGCTAAGGTGGTAGCCC
CAACCCTCCACAACGCGGCATGTCGCTCCCAGCTGAGCAGCGCCGCGCGACAAGTGGCGC
AGGCCGTGGAGCGCCTGGTGGACGCGTGCGCCGCGGCCCCGCCCTCCGCCGGCGCCCCAG
TGGACGCGCTCATGGGGGCTGCGGCCAGGGTCTCCGAGGAGCTGGAGAGGCTGTTGGCGC
ACTGTCAGCTGGAACGTGGCGCGGAAACAGCATCTCGTTCAGTGGAGAGCGTGTTGACGG
CGCACGAACAGCTCGTGTCCGCTTCCGGTCCGACCGACATGTTGAAACACGCGAGACAAC
TAGGACACGCCACTGCTATGCTTATTACTAATATTAAGACGGAAGCAGAGAAGTCCCCGT
CCGAGAGTCAGCGCAAGTTGTTAGCGGCCGCCAAGCTGCTCGCCGACGCGACCGCGCGCA
TGGTGGAGGCGGCCCGCCAGTGCGCCACCTCGCCACAGGATCGTGAGAAGCAGGAGGCTC
TCCGTCGTGCTGCCGAGGAGTTAAGGTTCATTACGGCGGACTACGCGCAGGGACAGGACA
TCGTGGGGTCGCAGGTCGCACGGCTACAGGAGAGCGCTCGTCAAGCCACATCGAGTGCCA
CTCAATTCATAACGTCGGCTCAGAACGCGACGCAGTACAACACTAACAGATACTCACAGG
AAACCCTCCTAGAAGAGTGCAAGGTTCTCCACGAGCACCTGCCTCGCATGGTGGAAGCCG
TGAAGGTATCAAACCTGAAGCCGACCCAGGCCGCCGCCAGATTAGACCTCATATCCGCTT
CCGAGGCTTTCTTACAGCCGAGTGGTCACGTGATCAGCGCGGCTCGCGGCGCCCTGCCGA
CGGTAAGCGAGCCCTCCGCCGCCAAGCACCTCGCCGACAACACGCAGCTCTATACTTCCA
GCTGTGCGGACCTGAGGTCAGCAGTGAGCCGCGCCAGGATATCCTGCAAGGGTCTGGAGC
TGGATGCTGCGGCCGAGATCATCAAGTCATTACAGTCTGAGCTGGATGAATTAGAGGAAG
CTCTCAGGGCATTTGAACTTAAACCATTGCCTGGACAAACGGCTGAATGGGCATCAGCAA
CCATGAACTCAGCATCCCGCGCCGCCGCCAGCTCCACCGCTCGGCTGGTGTCGGGAACAT
CCGGGTCGCACGCCGCGCCCGAACTCGCGCACGCCCTCAGAGACTTCACGCACGGCCTGC
GCGCCGCCGCCGCCACTGCACCGCCGCCCGCCGCGCACAGGGTAATATCATCAGGTCGCC
AAGTGTTATACTCTTCCCTCACCCTGGTGGAAACCGTCAAGAAACAGATCAGCAGTTCCG
AGGAACTGGACACCACTACGCTGGCTTCCATAGCCAGGGACATCACGCATGGCATGGAAC
AAACCATAGAGTCAGTACCAACTCACACAGAACTGGATCTGGCGATGGAGAATATTAATG
AAACGTTGAACATTCTTAACATGGGAGAGTTTCCGCCTACTGATAGCACTTATGGTGAGC
TTCAATCTCAACTGAACTCAGCAGCAGCCGGCCTCAACCAGGCCTCTTCAGTGGTGGTAC
AGAGCGTAGACGATGCACAAACGTTGGCCCAATCCAGCCAACACTTCGGACAAGCTTTCA
ACAACTTGTTGGGCGTTGGTATGGAGATGGCCGGACAGACTGAGGATCGTGAAACACAAT
CATTGATGGTGAACTCAATGAAGTCGGTCACCATCAATTCATCGAAACTACTTGGAACCG
CCAAATCTGTCAGTCAAGATCTGTCTCGTCCGAACGCTAAGAACCAGCTGACGGCGGCCG
CGAGAGCTGTCACAGAAAGTATTAATAGATTGGTGGACGTCTGCACAGAGGCGTCTCCAG
GTCAGAAGGAGTGCACGGCGGCGCGGCGCAGCGTGCAGGCGGCGCGGCCCCTGCTGGACT
CCCCCACGCAGCCCCTCACGGACCTCTCCTACTTCGGCTGTCTGGACGCCGTGCTCGACC
ACAGCAAGGGACTCAGTGAGGGCATGTCTACGATGGCGAGCGCCGTGAAGCGCGCGGACC
ACGAGCAGTTCCCGCGCTCCGTGTCGGGCGTGGCGGCCGCGGTCCATGGGCTCGTGGAGG
CGGCGGCGCAGGCGGCCTACTTGGTGGCAGTATCAGACGAATCCAGCGTGGCGGGTCGTA
TAGGCCTCGTGGATCAGGCTCAATTCGGACGGGCCGCTCTCGCCATACAGCAGGCCTGTC
AGCTGTTAGCGGACCCCGCCTCTAACCAACAACAGGTGTTATCGGCCGCCACAGTGATCG
CCAAGCACACCAGCGCCCTCTGCAACGCTTGCCGAGTGGCGTCCGGCAAGACCACGGAGC
CGCAAGCCAAGAGACACTTCGTCCAAGCAGCGAAGGACGTCGCCAACTCCACCGCCGCGC
TCGTCAAGGAGATCAAGGCGCTCGACACTGATTATAGCGAGGCCAACCGCGCCCGTTGTG
CGACGGCCACCGGTCCTCTGTTAGAAGCGGTTCGTTCGCTCTGTCAGTTCGCGGACTCGC
CGGAGTTCGCTTCGATCCCGGGTCGGATCTCGGAGCAGGGGAGGAGGAACCAGACTGATA
TATTGGATTGTGGCAGGAACATAATATCAGAGTCATGCAGTATGTTAGAAGCGGCCGGAC
AACTAGCACTCTCTCCTGATGACAGAACTCAGTGGCATGCTCTCGCCGCGCACAGCAAGA
CTCTCTCCGACACTATCAAGGCGCTTGTTACTAATATACGTGAGAAAGCCCCCGGTCAAC
GTGAGTGCCAGTCAGCCGTAGAAACAGTATCTCAACAACTGCGAGATCTAGACCACGCCG
CTATACAGGCCGTAGCGCAAGAACTACAGCCGAGGAAGGCCAACACTCTACAAGGATATT
CGGAACAGATAGAGAACTGCTGCACGGAGATGTTGGAGCGACTGGAGCCGCTCCGTGTGG
CCGCCAAGGGAGAGGCCGAGAACCTGGGACACAGCGTCAAACAATACGTATCATACTCCG
AGCCGCTAGTCCAAGCGACGGTCGGCGCGGCTTCCGTCGTGACAGAGACGACAGAACAGT
CCGGCCTGCTCACACACGCGCGCACCGTGCTCGAGGCCGCCGTCATGCTGCTGCACGCCG
CCAGGGGCGCCGCCGGCAACCCCAGGGCGGTGAGCTCGCACGAGGCGGTGGAGCGGGGCG
TGGTGACGGCGCGGGCGTCGCTGCAGGAGCTGGCGGAGCGCGCGCGGCGGGTGAGCGCGC
AGCACGGCGCCGTGGGGCCGCTGCTGGACACGCTCAACAGGGCGCTCGCTAGACTCACCG
AGAGGAGAATGTCCCTCCTCAGTACTTATGATGAGACGGATTCGTTCGTCGACTATCAGA
CAAGGATGGTTGGAGTCGCGAAAGAGATAGCAAGACTCGCTACAGACATGACGGCAAAAG
CAGCAACTGAACCCAGCCGGCTGGTGGAGCTTGGCAATGAAATGTGCGGGAAGTATGAGA
AACTCGCTCAAGACAGTGTTGGGGCCTCCGCTACTACGCCCAACGGTGATATCGCTAACA
GGATCCGTTCAGCAGTAGTGGAACTTGGCGAAGGTGTCTCCGAGCTCATAAAAGCAGGTG
GACATTGTCGCGTGTCAGCCATCGCTCAGAACCAACGCGCAGTGGCTGATAACGCCAAAC
TTGTCAATGAGAGGGTGGTGATGGTACTGGGAGCTCTCCAGGCGGGATCCCGTGGTACCC
AAGCTTGCATCGACGCAGCCGCCACCATCGCCGCCATCATCGGCGACCTGGATACCACCA
TACTGTTCGCCAGTGCAGGCACCCTCCAATCTGAGAAGGAAACGGACACGTTCTCCGACC
ACCGCGAGAACATCCTGAAGACCGCCAAGGCGCTGGTGGAGGACACCAAGACCCTGGTGG
GAGGAGCGGCCGGCACTCAGGAGCAGCTCGCTGATGCTGCACAGGCTGCTGTCACTACTA
TAGTCCAACTATGCGAAGTAGTAAAGCTTGGCGCCATGTCCCTGGGCTCCGGTAGTCCCG
AGCCCCAAGTGTTGGTGCTGAATGCTGCTCGTGACGTGGCAGCGGCGCTGAGGGACCTGG
CGGCGGCCACCACGGCGGCCAGCGGGAAGCCGCTCTCGGGACCCGACATGCAGCGGCTCA
AACACGCTGCCAAGCGGACAGACAAGCGGTGGAGCGTTGCCCACACATTCCCCAGAAACA
AACGCAGGTCCAACGGTGGGTACCAATCCTGCGACTCCGAAACCGATCTGTTCCAATCAG
ACCAGGAGGACGAGCTGGTCAAGCTCTTGGACTATTCAAGTCAAGATGATGACGTCTCTC
CGACTATATTCCACGATAATTGCGAGGAGATCTTAGCCTATATAGAAGGTCTTATGAGAT
ATCCGACTAAAACACCCAAAGATGAAGATTTGAATAATAGGTACAATGCAGCCGCGAAAA
ATAGTATCATAGACATGGATTGGCGAGTCTTAAAATATGGTGAAAACATACTCTTAGGAG
AAATCAAGAAACTGGTCGATTTATACGTAGACTACTGCGATAGAAACGAAAATAAAAGGA
AGAAAGATAAACTCCAGCGACTGAGAGCGAGCACTGAACTTGATACCGAGATGAACCGCC
TCTCAAGAGTCAT
(7573 bp)

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