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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR21618c1_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_talin-1_[Bombyx_mori]
Ontology
GO:0001726 C ruffle
GO:0003779 F actin binding
GO:0005178 F integrin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0007044 P cell-substrate junction assembly
GO:0007155 P cell adhesion
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0030274 F LIM domain binding
GO:0030866 P cortical actin cytoskeleton organization
GO:0032403 F protein-containing complex binding
GO:0032587 C ruffle membrane
GO:0042995 C cell projection
GO:0051015 F actin filament binding
GO:0070062 C extracellular exosome
GO:0070527 P platelet aggregation
Transcript
Level		FPKM:9.64 TPM:9.44
ORF EntryO_TrvaFAMAMG24546_5prime_partial:A_TrvaFAMAMG_TR21618c1_g1_i3
Sequence
(Nucleotide)
GTTCAGTGGCCATGAACTCATTCTAGAAGAGATACAATTAGAAAAAGACAAATATGAGAA
AGAGAAAGCGTCTTTACAAACTTTTATCGATGAAGTGGACAGTTCTATAGAAAAAAAACA
AGATTTGGAGTACGACAAAAAATACGAAGACATGGTGTTAAAGCTGATAGATTTCGCGAA
AAAGGACTTTATTTTTAAAGGCTTTGATCCTATTATCGAGCAGCTCAAAGCTCTATCGAA
CGTTAAAATCGAACGAAAGCGAAAAACAGTCAATATTGAAGATATACTCAATGTTTACAC
ACACATAGACATAACTAAATACACTTACGAAGAGCTGTGTCTACTTGAAAAATACTACAA
AGAAATTATAAGAAAATATAAACACGAGTACAATAACAAAGAAAACATCAAAGAAACCCC
GACATACCATAAAAATGTAATTCTCAACGTCAACACAACGAATAATTTAGTAAAAAAAGT
TAAAATTAACGGCGACAAACGCAGTCACAGAAACTTAGAAATCTTCGACCTGACCAGGAC
CTACCCTGAGCAATATTATGCCAACAACTGGTGGACGATTTACGAGGATATTTTAAAGAA
CAGGGAACACCAATTTGGGTCTTTGGATAACTGGTGGAACTTCTATGAAGCGATCTTGAG
GAAAGAGAATACTTCTGAAGAGGAATTGAAGAGAATAAGAGCTGTGGTGGAATATAGGAA
TAATCTAAGAAAGAGACCGAATAGTCGAATGGAGGAACAACTTAAAATGCTAGACGAAGT
ACACAATAATCGGTTTCGGGAGATCGAAGATGTTCAGGAGAAAAAGGATGAATCGGTGAT
GGTGACCAATGTGACGTCACTACTGAAGACAGTCAAGGCGGTTGAAGATGAGCATACGAG
GGGTACCAGAGCTCTGGAGTCAACCATCGAAGCTATATCACAGGAGATTGAGGTTCTAAT
GTCCCCATCCCCCCCTAAAACGACGGCCACCCCCGAGGATCTGATCCGGTGCACTCGTCA
GATGACTGTGGCCACGGCCCGGGCAGTGGCCGCTGGTAACGCCAACAAACAGGACCAGCT
TACTGCAGCTGCTAACCTGGGCAGGAAGACTGTTGTGGACTTGCTGGTTACTTGCAAGGC
AGCAGCCCAAACAGCGGAGACAGCGGAACTGCGCAGCCGCAGCATCGAGGCGGGTCGCGC
GGCCGCCGCGTCCTACCGCGCGCTGCTGTCGGCCGTGCTGCGGGCCGTCTGCGGCGAGGC
AGCGGCGCGGCAACACTTCCCCGAGCTGTCGCGGAGTGTGGCGCACACTGTCGCAGATAT
CATAGCCACGGCCGAGCTGCTCAAAGGTTCAGACTGGGTAGACCCAGACGACCCGACCGT
GATAGCGGAGAACGAGCTCCTGGGTGCGGCCGCCTCCATAGACGCCGCCGCCAAGAAACT
GGACTCGCTCCGACCGAGGAAACCAGTCAAACAGGAAGCGGATGAGACCCTCAACTTCGA
TGAGATGATATTAGAAGCTGCTAAATCTATCATAGCAGCCACTTCCGCTCTCGTCAGAGC
TGCATCCGCCGCGCAGAGGGAACTCATTGATCAGGGCCTAGTATCAGGTCGAGCAGCCTC
CTCATCAGATGACAGTGCCTGGTCGGGCGGGCTGGTCTCCGCAGCCAGGCTGGTGGCCGC
CGCAGCACACTCGCTGGTAGAGGCGGCCAACGCGCTGGTCCAGGGCGCCGCCACCGAGGA
GCGGCTCATCTCCAGCGCGAGGCAGGTGGCTTCCTCTACTGCGCATCTGCTGGTCGCTTG
CAAGGTCAAAGCAGACCCTGGCGCGGAGAGCACCCGTCGCCTCCAGGCTGCCGGGGCTGA
GGTCATCAGGTCCACCGACAACCTGGTGCGCGCAGCCAGGGACGCCATCACCTGTGATGA
TGAGAGGAGCCTGGTCCTCAACAGGAGGATGGTGGGAGGAATCGCTCAGGAGATTGATGC
CAGATCTGAAGTCCTCCGCATAGAGAAGGAGTTGGAGGAAGCGCGCGGCCGCCTCACCGC
CATCAGACAAGCCAAGTACAAGCTCAGGGGAGACACGGACGAGTCTGATGCTGACCAGCA
GCCAGGGTACAGCAGCGACGCGTCCGGACCGCAACGGATTCGAACCCCGAACAGCAGCTT
CGCGAACACGACATACAGCCCGAACAGCACCTACCACTCCACACACAACCAGAGTTCACT
GTTGACCACCAACAACACATTCAATACCACGCACAACTCCTACGGACATAATAACAGCAC
TAGTCCGGTGCCCCCACAGTCGAGTCAGCCGACGAGCCCCACGTTCTCGAGCTTCAGGCC
CCCGCCCGAGGCCCCCAAACAGAACTACGAGGCCTTTACGACACGCTACGAAACACGAAT
GTACGACACCCCACGACCCGTAAACGATTTCAACTCGCACACGGAGAGGCAAGAGAACAC
ACACTACCAATACAAACAGGAGAAATTCGACTACGACGCGCCCAAAACACCTTTAAGTCC
GAAATTCAACGCTAGAGACCTCAAATTCGATGACAAACCGGAGCCAATTTACTCTACTTT
GAAGAAGCCCTCAGATGGGATAGGCCAGACATTCTCTGAACACCAGAAATCTACGGAATC
GATTCCTGGAGGAACGACGCATTCGGAGTACTCAGTCAAAAGTGAATCTTACCAGTCTTA
CCCTAAGACTGAGTTCTCCAAAACAGAGTACAGACAAGAGGTGAAATCTCCTTTCACATC
CACCCCGAAGTTTGATAGAACAGAATACAAAAATACTTCTACGGATTTGGTTAAGGCAGC
TACCCCTGACTATGAACGGATATCATCTCCCTACGGTAAAGAGGTCCACAGCTACGGAGG
TCCAAACTACATGGAAGAAACTACAACGGAGGTCAAGGAAATACCGAATGGAACCCAGAA
AATAACCACCACTAAAATATACAGTTCTTCTCCCGTTAATCTAACTTCGACCAGCACTAA
ATATGAACCGATTAGGCTGGACGGAATCGACGAAATATCGAAGACTTTCGATAACGATTC
GCGTTACAGCACTCTGGACTCTCGGTTCAACACATTAGATTCCAAAATCAGTTCGGACAC
CAGTCGATCCTTCATGAGACCTTCCGAATTCCAATCGTCAGACTACCAGACCACTACCAA
CATAACTAAAGTGAAAAAGCCCGATCTGTCGAAGGAGATTGACAGCTTAGACAAGAGAAT
GTCAAAGCAGACCATCACCTCCGAGACGATTGAGAGGAAATCCGTGATGACCAGCTCTCA
CAAGTCAGAATCCAGTTCCACTGTCACCAAGAAATTCGGCAACTTCTAACAGGTACGTCG
CTTGCTTCGTGCGTGACAGACGACGGGTTGACAGCTGTCATTTTGACATATGTCAAAGTT
TAGTGTATAAGTAGTATTTATTTGATGTTTATTGTAACGCCGTCTTCGATTATTTTTGAT
AGCTCTATTAATTGGTATAAATGACGTAATCCAAGACTATCAAAGTTGACATATACCGTA
TTGTAAATTGTGACGTCACTCTCGTATATTTTTAGTTACAAAGTAGTTGTTGAAACTACG
GATAGTTTTCTATCTCTCGGTAGCTATCTTCGGATCGAAAACGGCGTTTAGTGTAATCTA
CCAAGGATAACAGAAATGGTTCTTTCGTCCATTTTTGGTAGAAATAAGGTGCTAATTTTG
TCGTGAATTCGGTGTCTAATTTTATGCCTTATTGAATGATGATATGTGAATGAAGTTTCT
TTCAAAATTATGATTGTTTTAAAACTTACAAATTTTAAACAATGATAGTTTTAGATATTT
TTGATTTCTAATAAAGAAACAAGAACTTATGAAATTATGCATAAAATTTATATTTATTAT
ACTTTTACATAATGTTGAAACACTCATAGTTTTTAGTAAGACTTAAGATTTTCTCTAAAA
CTGACTAAAAAACACAAAATCAGTTAAATTTTAACAGTGAACAGTTTATATGAAAATCTT
AAGTCTTAATATTCTTCACAAAGTGCAAACCCATTTGGGTTCCTTATTATAATGCCTAAA
ACCATTTGTGCCATTAGACTGTTTGATTGACGAACCGTGTGCCTTGCGACTTAAAAAAAT
CGGACTGTTTCCAAAAAACTACGATAGGTGGCGCTAGTTCAGTGTTGCCAATTTAACGCT
AAATTTATAGGTAAAATGGCGGTTTCAGCGGTTTTTGAGCTTGATTCGAATGATAACAGC
ATATTTCGCTGGTTGATTGATGGTTTCAAAGTATTTTACCATTGTATTCCTTTGAGAAAA
AATAAAAGAGTAGTATCTGTAATATCTTTCGAAACATTTCATTTCAAAGTACGGGTACAG
AGACCTCACTTACATTGCACAATTAAAACCTTAACTATATCGGTCCATTGGAATAAAGTA
AATAATTTTTGAGTGCTTATAAAATTATTTATTGGATAAAATAACATTTTTATTCAAAAT
TTAATAAAACCTAAGAGAAAAACTCATAAATACATTTGGTTTAGAAGAAACGTAGGTGAC
GTCCATTTTTCAAAATTAACGCCATTTTGTAAAATTTAAGTTGGTAACTCTAAATGGAGC
CAGTAGTTGATAGTTTCAATATCTCGCCGATAGATTGCGGTAACTTTATTAAATAATTAA
AATGTTGTATTAGTTAAGAAAATTTTATGTATTTTGTAATGTTTTATTGTGAAATTTATG
TTTTAATAGTATTTGGATGTATTGATGTTTCTTGAAAACAGTCTGATGGAAATGTGCCAT
GAAAATTAACTATTAAAATTATATTAACTGTTGGTTGGTAATTTCGCGAGTTTTTAAATG
TTTTTTAGGTATATGATATATTTTGGGGAAGAAATTTATGGTGGTGGTGATATTATTTAT
TTATAAATATTTTATTTTTCTAAATTCGCTAATTTAAGGCAACTATAAAATAAATATTGT
TGACTAAAACTCGCGAAATTCACAAGGTGTTTTTGGTGCAATTAATAATTATAAAATAAT
ATACTTATATACTAAAGTCTTACTGTGTGCAACTATCATATTACTTATGGACTAAATATT
TATAAAATTATATTTTTTGTTATAGAAATATAACGACGATGACAACCGAAGTCGTCTGAA
ATGCAAGAGAAATTTTCTTGTAAATAAATTGTTGAAAAATTGCTTTAAAAATCAAATTTA
AACTAAATGTGGCAACTATAATGGCATCTAAACAAAAAACTACAGATTTTAATAAATACA
TGTCATTTAATATTATTCCAAAATAAGAATACAGTTCCAGCGATTCCCACCGAATATTTT
AATAAAAAAGGCGATTTTTCAATAATTTTAAATTTTGGATTGTTATTACTTATTAATTTT
GATAAAACTATATTTTCCACTAAAATTGTATATGAATTAAATATATTGGGCAGTTTAATT
TCAAATATTAAAATTATGAAGAAGTGCCTTAGCTTATGAAACAGTGGCTTAATAAAAAAA
TAATATTAAAGCGACATCTATTAGAGAGATAGTGAACTAAACAACGTCAGCTAGTTCAGA
TAGTTGGAACTATTTTTATAATATATTGTATAGGTTATGCCCGCGCAAGCGATTCGTCCA
CTGTTAGGTAGAAAAACACCAATTATATAGAAATTAGCTTTCCTGAAACGAAAATTGTAA
TTTTATTGACAAAACTAATTTATTACATAATATTTGAATGTGTAGAAATTCATCTAAATT
AAAAAATGCTGTTGATGATTTGTTTCAAAAGATAGCGCTGTGTAAAAAAATTAAAAAAAA
AATTTCATTGACAAGTTATCTTGTTGTATTTAACAATTTAATATATTATTTAGCGTTAAG
TAATGAATAATCTCATTATTAATGGAAATACCAAATACTAAGGGAATGTAATCATTATGA
AATCGTGAATTGTTGTATTTTTGAGATTTTAACGTAAATGTAGCGTAGTGTTCTTGTCAA
TATGTAATAAACGTCTTACTAATAAAAAAAAAAA
(6034 bp)

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