SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR21411c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		ABC_transporter_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0002576 P platelet degranulation
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0015662 F P-type ion transporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:0016404 F 15-hydroxyprostaglandin dehydrogenase (NAD+) activity
GO:0016887 F ATP hydrolysis activity
GO:0031088 C platelet dense granule membrane
GO:0032310 P prostaglandin secretion
GO:0034220 P ion transmembrane transport
GO:0042384 P cilium assembly
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0043225 F ATPase-coupled inorganic anion transmembrane transporter activity
GO:0055085 P transmembrane transport
GO:0055114 P obsolete oxidation-reduction process
GO:0098656 P anion transmembrane transport
Transcript
Level		FPKM:23.11 TPM:22.64
ORF EntryO_TrvaFAMAMG24452_complete:A_TrvaFAMAMG_TR21411c0_g1_i1
Sequence
(Nucleotide)
TTTTTTTTTATTATTTTAGACTTTATTTACACAATTTCTTATAAATAACATACTAAAATT
AAATTATTTCTCTGCATTTCTAGCCAAATGCGTGTCTTTGGCGACTTGGAAGAGTACTTT
GCTCATGGCGTCTCCCGTTTCCCGAACCATAGAACTAAACTTAGAATTGGGGTTAGAGAG
GAGATTGTATGGAGTATCGTATTCAGAGACTATTCCTCTGTCCATCACGAGAACCCGGTC
CGAATCCATAATCGTGTTTAGTCTATGGGCGATAGTGATCACCGTACACGAAGCGAATTC
GCGACGAATTGTCTTCTGAATTAATGCGTCCGTTTGCGGATCAACGTTGGCCGTCGCCTC
GTCCATCACAAGCACCTTGTTAGAGCGAAGGATGGCTCGAGCCAAACACACCAACTGACG
CTGACCGGTGGAGAAGTTGCTGCCTCCTTCCGATACTTTGTAGTCTAACGCTGGGATCAC
TTCTTTTAACTCAACTTGTTCCAATGCTCTCCAAATTTCATCATCACTATAAGTTTCGAA
GGGATCCAAGTTATACCGAACCGATGCAGAAAACAACACCGGCTCTTGAGGAATTATTGA
TATCTTCGACCTCAAATCCGTTTTAGCGATGGTATTGGTATCGATTCCATCAATTATGAT
TTGTCCTTGAAGCTTGTAAAGTCTGAAGAGTGCGGATATCATAGACGACTTGCCGGCGCC
AGTGCGACCTACTACACCCACCTTCCAGCCGTTTTCAACGACAAAGTTCAAATTGTTCAG
TACTGGAGGGTCATCCTCCGAATAGTTCAGACAGACGTTTTGAAACTCGATGCGTCCCTG
ACTCGGCCAGACTTCAGGTGGCTGGGATCCTTTATACATATTTTCTTCCATCGGTAGTTC
TGTGTATTCGAGAACTCTTTCCACGGCAGTCATCTGTCCGAGGAAGTCGGCTGTGAACCG
AGCGGCCATCTGAAGCATCATCGTGAGTACCATAGACTGACTGACTGCCAAGCCCACGCT
GCCCACAGGAATCAGGGTAGTAAAGTCGACTACAAGGAAAGTCGCTAATACAACTCCGAG
GTACACCAAGCAAAGTGCATCGAGATACAAACCGAATGCAGTCGAACCACCGACGAATGT
ATAAAACGCACTTGTATGTAGATTCTGTGCACTATCAAACATATCTAGCAGTTGTCCCTG
TGAGTTAGAACTTCGTATCGTAGACAATCCTGCCAGGGTTGAAGTGATCATGCCTAGTAC
AGGACTTTTCGTTGTACCCTCCAACCTTTTGACTGCCTGCGCTGCGTTTAGGTACCATTT
TAGTAAGAATATGAATATGAAAAGCAGCACGGCGGTTGGTATTAGTGTCCACGGTAACGC
GATGGCGTTCAGAACCAGGATACTGGTCATAGTTAGATACATCTGAACAGTCTCGAACAT
ACTTCGCGGGAGGAACTCGTCTATAGCACCCATGTCCTTGGAGAAACGGTTCAGGACACG
ACCTGAAGGATTCATATCGAAGAACCTCATGACTGTTATTATCAAGTTTTTATATACAGT
ATTGTGCAAAGTAGCTGAAGCTCTCATCGTGGTGATGACGAAAGACAGGATCCTGAGATG
ACTAATGACTATGAGGATCAGTATGACTCCGCCGTATGTCCACAAGTAGACACCCAGAGT
GTACATTCCTGCTTGCGTGTCTAAACTAGTGCTAGGCTCTTCATCCTCGCCTAAAGACTG
TTCGTACAAATCTACTTGATTTGTCCAGAAACTGAGCCAGTAATCGATGAATGTAGCGCA
TCCCTGTGTGAGCACCATAGTGAAGATAGTCAAGAACAATAAGAACCACGATTGCACGGA
CGCCAAGTACTTGTACAATACTGCAAATTTCAAGTTGCCAGTTGCACGCTTCTCTTCCTC
CTGTACTTGCAACCTTCCATGTTTTGTTTCTTCTACACTCTTGGTAGACATTTTGGACGT
GGTCCGAGAAAACGACGGTCTCTTTTCCTTTTCTTTTTCGTCATCGTTGCTCTCTTGATT
AGTTAATAACTTCGAAAATTCTGTTCCAGTGTTAACCAAGTCGTCATATGTTCCAACATT
TTCGATGGTTCCCTCATTCATGATAACAATAATATCAGCCGCTTTGAGGTAATGGATTTG
ATGTGTGACGAGAACACAAGTACGCCCACGAAGATATCCTTTGATACATCCCTCAAACAA
TTGTCTGCCCACATTAGCGTCCACCGCAGACAGGGGATCATCTAACAAGTAAATATCCGC
CTCTCGGTAAACAGCTCGGGCGAGATTAATACGGGCTCGTTGTCCCCCAGATAAGGATAA
TCCACGCTCCCCGACAAGGGAAAGATCTCCATAAGGAAATTGTTGGAAATCAGGAAGCAA
CGAACATACTTTACATACCTCTTGGTATTTATGTGGATCGTACGGTAGCCCAAACAGAAT
ATTTTCTCTCACTGTGGCAGAGAATAGCCAAGATTCCTGACATGCGTAGGATATTTTTCC
ATTTATTCGCAGGCTACCGCTACAAATTGCGAGCTCTTTCAAAAGTACTTGCAAGATTGA
TGACTTTCCTGAGCCAACAGGTCCAATAATAGCGCAAAGCTTGCCCCTGCCTATTCTAAG
ACTTATACTTCTGAGTGTAAGATCCGATATATCCTCCGCAGGTAGCCATGATGCGTCGAC
TCTAGATAGTTCAATTGGATAATCTGAGACAACTGAGTCTCTTTGTTGCATTTGCTCATT
ATCTAAAGATGCGCCTAAATTCTCGGCAGTTGAATATTTCTTTGGAATCACATCTTGTGT
GATTAGAGATGCCTTTTTATTGAACATTAATTTATTATCATTTCCATAAACCTTAGGTGT
TAGACTTATATCTTCTCGTTCATCTTTTACTAAAAAGTTTTGTATACGTTCCAATGACAC
CAACATTTCCGATAAACTCGCAATAGCTAGAGGCAATATCATAGTCAAGTTAATTTGGAT
AATACTTATGTATTGTTGAATGGGGTAAATCAATGTCGCTGTAACAAGATTGCCCGTAAG
CAATAATGTCAAACTAGTAAAAAATATCATGCTTCTTTCCGTGAACAACATGAAACCAAG
GAAAACGCTCCTAACGAATATAGACTTCCTGAGTGCTACCATTTCGTAAGACCTGGCCAA
TTTGACAACAGTTTGAAAAGGTTTCTCCCATGCGTACATCTTTATAACCTGAATGCCTCC
AATAATTTCAGTCATCAATTTTATTCTTCTGTCTGTTCTTTGTGCTGTTTCTCTCCTAAT
AACAGACGTCAACTTCGTAAGACCAGCTTGTATGGGCAGAATCAATATAACAACACCAAA
GAATCCAACAAATGGTGCATATCCAGCTGAGATATACAAGAAGTATAACACGACAGCTGC
TTGGACTGGAACCATCCAGAGATAGTGCAAGAACATGAACGCAAAGTCGAATCTGGCGAC
ATCGTTCGACAGGAGATTTATTAACTTTCCTCCACTGACGTCGCCCAGTGAAACTTGGTC
CATCCTTAACAATTTCCGGAATATCAAGGAAGAACAGGCCACTCTTATTTTAATACCGAA
TCGAGCAACAAACAACGAGTTATGATGCTGACACATCATATTCACGAAGTTAATGCCCAA
TAATGCTAGAGCGTAATAGCTGGCTTCTAACCGAGTCATATTCGCCTCTACCGACCAGTA
AGAAAGTAGTTGAGCAAACACTAACGGCTGAACTATCCTTAGAGAAGCCATAATTATCAA
GTAGATAGCTCCAGGCATGTATGACAGCCAATACGCTCTGCGCAGAGCCTTCCATAGCGA
TGGCTCTCTTTGTTCTCTTAAAGACGCTTCGTATTCCTCTATCCAATATCTTTCTAAATA
TTCTCCTTGATTTTCAGAGTTAAACGTTTTTTTGGGAATAATAAGATCATCTTCAACAAT
ATCTCTTTGATTTCCCCTTATAAGAACTGGACACATCCACCATATAAAAATTCGAGATAA
AATGTTCGGTTTGTGTGGTTTCTTCTGCGTCTTAGCACCAATATTGTTGTCGGTTCCCCC
ATCGAAAGTCATTTTAACAATTATCACTAATAAACTATTTTTAATTAACTAATATAATAT
TTTTGATTTATTATAGGACATGACTGTTTAACATTAACTATCGAACTAGAAACGAAGGTA
ATGTAGCCAGTGACGATGATGATAATTATTATATTGCCG
(4239 bp)

- SilkBase 1999-2023 -