SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR21408c0_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_chitinase_isoform_X1_[Bombyx_mori]
Ontology
GO:0000272 P polysaccharide catabolic process
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004568 F chitinase activity
GO:0005975 P carbohydrate metabolic process
GO:0006032 P chitin catabolic process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
Transcript
Level		FPKM:14.62 TPM:14.33
ORF EntryO_TrvaFAMAMG24447_complete:A_TrvaFAMAMG_TR21408c0_g2_i1
Sequence
(Nucleotide)
GGGGGCTATTCTTGAATAGTGTTAGTGTCAGCCAGTAACTGCGATAGTGCACAAGGATTG
TGAGACAATGGAGCTTCGGCTGTGCATTTTCGCGACCATCTTGGCTGTTGGCGCTTGCGG
GCCTCCAGGGAAACCGAACTTGGGCTGGGGAGAGCGCACCTTCGCGATCGTCGAGGTAAA
CCAAGCTGCGACTGCCTACAACCAGCTGGTCAAGAAGAAAGATGCAGCAGACGTCACTGT
CAACTGGAATGTGTGGACTGGTGATGCGGCTGATAAGTCGAGAGTCTTGCTCAATGGAGA
GGAAGTCTGGACCGGGGCAGGGAGCGCTTCGTCAGCTGCTTTCAAAGTGAAGAAGGGCGG
CAGATATCAGATGCAGGTTGAGCTCTGTAACTCAGATGGTTGCAGTTCCAGTGAGGGTGT
TGAAATAGTCGTTGCTGATACCGATGGGAGTCATTTACCACCTTTAGATTACTCTATGGG
CGAGAAGAACAAGCCCTTCAAGCAGACTTCGGGTAAAGTTGTTGGAGCCTACTTCGTCGA
ATGGGGAGTGTACCCGAGAAAGTACCCTGTGGACCGCATCCCGGTGCCGAACCTTACTCA
TCTCTTGTACGGCTTCATCCCAATCTGTGGAGGCGATGGCATCAACGACAGCTTGAAGGA
AATCGAAGGTAGTTTCCAAGCCCTTCAACGTTCATGCAGTGGCCGTGAAGACTTCAAGGT
TTCCATCCACGATCCCTGGGCTGCGCTTCAGAAACCACAAAAGGGTCTGTCTTCCTGGAA
CGAGCCATACAAAGGCAACTTTGGACAGCTCATGATGTTGAAACAAGCCAACACTGGTCT
CAAGATCTTGCCCTCCATTGGTGGATGGACTTTAGCTGATCCCTTCTTCTTCTTCACCGA
CAAAACCAAGCGAGACCGTTTCGTTGCCTCCGTGAAAGACTTCTTGCAGACCTGGAAGTT
CTTCGACGGTGTCGACATTGACTGGGAGTTCCCTGGAGGCAAAGGAGCTAACCCTGACCT
CGGCAGCCCTAAAGATGGTGACGTCTACGTTGAGCTGATGAAGGAATTACGCCAAATGCT
GGATGAGCTCTCCGCTGAAACTGGAAGGACCTACGAACTAACTTCTGCTATCAGTGCTGG
TTGGGACAAGATTCAGGTGGTGAACTACAACGAAGCCCAGAAATACATGGATCACATCTT
CGTCATGAGCTACGACTTCAAAGGGGCCTGGTCTAACGACACTCTTGGACACCAGACCTC
TTTGTACGCCCCAGCATGGAATCCTAAAGAAACCTACACCACCGACTTCGGAATCAGGTA
CCTGCTCACCCAAGGAGTGCAACCCAAGAAGCTGGTTGTGGGAGTAGCCATGTACGGAAG
AGGATGGACCGGCGTCCACGACTACAAAGATGACATTCCGTTCACTGGAGTCGCGAATGG
ACCTGTCAAAGGAACCTGGCAAGACGGTGTTGTGGACTACAGGGAAATCCAAAACGGGAT
CACCTCTGGCCAGTGGCAATACTATTACGACAAAGTGGCCCAGGCTGCCTACGTCTGGAA
TCCTTCAACTGGAGATCTGGTGACCTATGATGATGCAAGGTCCGTGATTGAGAAAGGGAA
GTACGTCAGGAATAACAAGCTCGGAGGTCTCTTCTCCTGGGAAATAGATGCTGATAATGG
AGACATATTGAACGCCATGAATATGGGCCTAGGTAACTCTGCTTAATTTAATCACTGACT
GATAATTTGGCTGAATTGATCGGAATCAGAAATCTGAGAATTGAGGGATTTTAAGTAATT
TGGAAACCAGCTTTTTAACATACTTGAAGTAAGTATTTTTTTAAATTGCTTATTTAAAGG
AATACTTTTTGAAGTAGATATTTTTTTTTTTGAATTTTGACAACTGCTCTTTTTAAAACT
ATTATATTTGAAGGGTATGCTGGTTTTTAAATTAAAGTATATGCTTTAAGAGTATTGATA
ATTGTTATGTATTGTAAAAATATGTACCAATGTTTAGATGTGTGCAAAAAATTTATTAAA
AATAATATGATTTTAAAAATTAATAATATGATGTTAGATATTTAGTAAAATTACTAAAAA
AAGACTCATATATCCGACCTAATTTGTTTAGTGCTTAGAAATTTTTAAGGTAAGGTCCCA
TCATGGTCGTATCTAGACGCATTTTCTTAAACTTTGATCGGTTGCAAATATCAGTCTCTA
CGAAAAAATGTGTTTAGATATGACTATGGTTTGCGCGGACCTATTGCACTTATGTAAAAA
AAATGTATTTTTTGTACGAAATGTATTTTTGATTCTGATCATTTTTGAAAAAAATGTGAT
TGTAATTTTAAGTTAGTTATAAGTTTGGTCTCAAATTGTATGACGAAAAATATGTATTTA
AGTTTAAATTAAGAAAAAGATAAATAAATTTATTCTAAAGTATTTAAAAAAAAA
(2454 bp)

- SilkBase 1999-2023 -