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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR21405c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_WD_repeat-containing_protein_46_[Papilio_polytes]
Ontology
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0008150 P biological_process
GO:0030686 C 90S preribosome
GO:0032040 C small-subunit processome
GO:0044822 F RNA binding
GO:1903955 P positive regulation of protein targeting to mitochondrion
Transcript
Level		FPKM:7.62 TPM:7.46
ORF EntryO_TrvaFAMAMG24445_complete:A_TrvaFAMAMG_TR21405c0_g1_i1
Sequence
(Nucleotide)
AAAGCACGCTGTTTTCTAAATAATCTTGGAAATATTCAGTTTTATGAGTAAATAAATGCG
TTTAAAAACTCTTGTCACTCAAATTAAATAAAAATGAAGGTACCGCAACAGAAAATTAAA
AACGACCGCAAGGAAAAATCAGGGCCAAAAACAGAAAAACCACACAAGCAAAAACCAAAA
CGATACTTTGAATTAGACAAGAATGAAGAAAAAGTCGAAGAAAAGAATAATGAAATTCAA
GTTTTTAATATAAAAGTGACCCCAAAACTATTAAAAAATCAAAAATACAAGGATGAAAAC
AAGAAATTCACAAAGAATCAGTATGGAAACACATTCAGTCAAAGAAAACAACAGAAAAAA
TACCCAGGGAAAGCTCCGATCGATCCCAAAATATTGCAAAAACATTCAAGAGGGGAAGGC
TTACAAGGCATTGGGGTTATGAACCCAATTCACAGAGCAAAATTGGAAAGAAAAGAAAAG
ATATACAAGAAGGCTTTAGAACAGGCTGCCCGTGCCGAAATATTGTTGACTGAAGATCAA
GGTTATCTCCAATTAGAAGATGAAGATTCAAACACTCGAGCAATTAATCAGAAAATTATC
GCTGAAAACGTTGACATAGCTGCAGCCACTAAAATCTTTGAATTAAACTTAGAGTTTGGT
CCGTACAGAGCAAAATACTCTAGAAACGGAAGACATTTACTTTTAGGCAGCAAAAAAGGA
CATCTGGCTGCATTTGACTGGGTAACAAAAAGGTTGCACTTTGAAATAAATGTTATGGAA
TCAATTCATGATGTTAGCTGGTTGCACATCGAAACAATGATAGCTGCAGCTCAGAAAGAA
TGGTTGTACATTTACGATAACACTGGTACTGAATTACATTGTGTGAAAAATGTTAGTAAA
ATACTGAAGATGGAATTCTTACCTTATCATTTTCTGCTTGGATCTGTGAATGAATATGGC
TTCCTATCATGGTTAGACATATCAATAGGAGAAATGGTAAATTCGTACAACAGTCGTGCT
GGAAGACCGTCATCATTAACACATAATCCACACAATGCCACACTTTGTCTGGGTGATTCC
AAAGGTGTTGTTTCACTTTGGGCTCCAACTGTGAAGGAGCCTTTAGCAAAGATACTGTGT
CATAGAACACCAGTGTCTGCTATTTCTGTTGACAGTAAAGGATTATACATGGCAACTGCT
GGTGTGGATAGAAGTATAAAAATATGGGATATAAGGAACTTAGATGGTCCATTGCAATAC
TACAGAGTTTGGGCGCCACCAGTGGAATTAGATTTCTCACAGAAAGACATGCTTGCTGTA
GGGTTCAATGAAACTGTTGAAATCTATAGTGATTGCTGCACAAAATCAGCTTCAAAGCCG
TATTTACGACACAAAATGTCGAAGACAATTAATAATTTCAAGTTCTGTCCGTATGAAGAT
GTTCTCGGTATCGGAACAAATCGAGGCTTCACAAGCATCATAGTACCAGGCAGTGGAGAA
CCAAACTTTGATGCTTTGGAAAGCAATCCGTTCCAAACGAAAAAACAAAGGAAAGAAGCC
GAAGTTAAGGCGCTACTTGAAAAGATTCCGGCGGAACTTATTACACTCAATCCATTTGAG
GTCACGGAAGTCGATGTTCCGTCTATGAAAGAAATTATGGACAGCAAGAAGAAATTACTG
CATGTGAAACCTAAGAAAATTGATATGACACCTCGTCGCAAAAACAAAGGCAAAAATCAT
ATCGCAAGAAAGAAGATCATAAAGGACGCAGCTAGAAAAGAGCATATTGATAAATTAAAG
GAAGCCAGTAAATTGTACGAAAAGGAAGTACACACAGAAAAACCAATCAAAAAACAGTCC
TTTGGTGTCTTAGACAGATTTGTTTCCAATCCCAATAAGACGAAAAAATAAAAGAATCTA
TTTTATAAAAAAAAAGGAGAGAAAAA
(1946 bp)

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