SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR21086c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_protein_split_ends_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0007379 P segment specification
GO:0007400 P neuroblast fate determination
GO:0007403 P glial cell fate determination
GO:0007411 P axon guidance
GO:0007422 P peripheral nervous system development
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0016055 P Wnt signaling pathway
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0035222 P wing disc pattern formation
GO:0035321 P maintenance of imaginal disc-derived wing hair orientation
GO:0048106 P establishment of thoracic bristle planar orientation
GO:0048749 P compound eye development
GO:0050832 P defense response to fungus
Transcript
Level		FPKM:74.41 TPM:72.90
ORF EntryO_TrvaFAMAMG24295_5prime_partial:A_TrvaFAMAMG_TR21086c0_g1_i1
Sequence
(Nucleotide)
TTTTTTTTTTATTAATAAATAATTCACTCTTTTATTTTTTTATTTACTAATTAATGTACT
TAAGTAATTCAAAGTCATTAAAACAATGAGTATCATAAATCATCGGAAATAAACATTACA
AAATTAAAAAATAAATACACTCTCGTGTAGTATTTTTTTAATAGTATTGGTAGGAGTTAC
ATACACAGGAATTTAGGTTGTTCGGGGTAAAGGGAAGTACGTTACAATACTATTTTCATA
TTTACATTATATACAATGGCTTATAGATACATTCAAGTAATAAAATCTATAAATATAATT
ATGATCACATTTTTTCTATAAATACGATGTCCGGACATAACAGACTTAAGTTACAGAACA
CATTCGGAAGCAGCTGTTACGCAACAAAATCAACTCTCACTCCGCATTTGCTGCACACTT
GAGATCAAATGTTTTTTTTTACAAAATATTTTATACTATCATCTCTCACTCTAGCAACAG
CCGCGACCGAAGATGTTCCGAAGTAGAGCCTTGGTCATTCTATTCTCGTCTCAAACTTCC
CACGAGCTGCTTGAAAATAGAATGAGGCAGGTCACAATTTTGATTTCGACTTGCCTTCAA
TGAGCCCTATTTGAAGTCATCCCGAAATCAAAGTGCTTTTTACGCATAATATAAAACTAT
ATCATAACTTTCCAATTACTCGTGGTACTCGTTCTATTTCTATATTATCGTCGAAGGGAA
TTAATTTGGAATTACAAATACAGAAAGCAATAAGTTTAAACATCTATTAATAATTGACAT
TTTAACAGCATCTAACAAGGCTGCGTGATCTAGCAGAAATACTTAAAATTTACATTACTT
TATCTAATTCATGCAAGTTATATTCAGTTAATACATTCAACTGCTTGCATCCTATACTTA
ACTTTGTGTAACTGTTAAAAAAAAATAGATTTAGGGTACTATTTCGTTTGTCAGCAATAT
TTGAGTTCTTCTCGTTATTATTGATTTCTTTTAGTTTCTAATAGTGTTACATTAATTAAG
AATATGTGAGAATTTTGAAGACGTTAAATTTTTATCGAAATAATTAAAATAAACGTATGT
AATAACTAATTAATCTCTTTACAGTCGTTTTTTTTGTTTAGTTTACACCTTATGATAATA
GAAATTATGCATAGCAATATTTACAGGACGTTCCTTCATAAGGATTTACAGACTTTATTC
AATGGGCTCTAGGTTCAGTATAAAATTTTTACATTTGTTATTTAAAATTAATGGACGAAG
TTGAGAGTTCGTTAGTATTTTTTCTAGCGATAACAAAGTATTTTCGACGGAAACATGACA
CGACTTCATAATTTTAATCCTATATTATTACAATAATTACGCTCTGCACTATTCTTTTTA
AACTGTAGATTATCTATTACATTACATTAAGTATTTTGTACTTTAATTTACGACATCAAC
GTTGTTGTCTCGGCCATACTAATCTTGTATGTGAAAAAACTTTGATGACAAGTACCTTCA
TATTATTAATACCCACATAAAAAGTCGTTCCACATAGAATGCAATAAGTACAATATTTTA
CTCTGTTTCTACAATTATTGCTCTCTGTACTATATACTATCAATACTCTCATGAAGTTAC
TGGCAACTAAGTCGAACGCAACACAGGAATATACTATAGAAATGAACAAAATGATGTATA
TTATGTAAGTAGCGGCCAGCGTTAAATCAAATAGACTCACTTATGTCTCAAATCCCAGCA
GTCAAAAGAAATAATATTTTTATGTCTGTAAATGAACAGAATTACTGTGCAGTTAGTTAA
GAATACAATTTTTATTTCCCAATTTTAAAGCTTTGTAAAGTGTTTGCCGCTACATCATAC
AGGTGTTCAATAAACAAGCCACACTGCTCTTATATGCTCCATACACTACCTTATTACAAT
ATATTAAGAGTCAGAATCACAGTTTATTTTCCATGTGTATTTTCCCCGAACCACTAAGAA
TAAAATTATTAACTACATAACTATTTACAAGATACAATAAACATTCGACCTAGATTACTT
CAGTTTATTTTACTATCTGTAACATTTTAAAAGAAATGTGTTCAGAATTAATGTTATATT
TACAATTTTTATTACTTTAACTTAGATATTTAGCTTAAAACAAAACAACAATTTACATTA
ACAATTAAAAATGCTCTATAGACCGCCTTTTCTTAGCAAAAATGTAATACTCGTAATAGA
ATTTATGACGTGACTTAGGTTTATTCATATTTATTTATTCAAGTGTAGTTGGCATCGATC
CCAGTCGACGATAATAAAAAAATAAAAATAAGTTGGAAACAAACGTTTCTACACTTTGTC
ACCGGTGCGATTAGTTGGAATTCATCTAAATCGACGTATCTAATTTTATAGTATCAAATC
AAGTCCTTATTTATATTTAGTTTTTTACTTGAATTCTTAGTTTAAAACGTGCAAGTATTC
GTTTTGTATTCAGTCACAAATCTACTAGGTCGATCGATTTCTAAACTTAAAAACAATAGT
AAAAAAGTTTCACAACCTTGTTATATTTACAACTCATTTAATTAAGTTTCGATCGACCAC
AAAGTAGTTCAGTTAAGCGTCTAGTTACAAAATGTCGTTTTCAGTTTAAAATATCGTGTC
ACATTCCTTGTTTGTCTTGCTCGATAGCAGCAGTCACAGTAACGTGTGAATATTAATCGT
TACAATTTATCAATGTTGGTTTATTCCTTCCTTCATACAGTTGCGATAATTATTAGCAGG
TGCGCAATATCAGTGACGCGATGCATTAGGTCGGGGGCTATGCGGTTCAGGTTTTCATTT
GCGAAGTCACATGATGGGAATATGTGAACTGTGAACATTGCCTGATGATGACCAGGAGGC
GCGATGTTAACAATGCCAGCTGCCTGTTTTCGTTGCAGGTACGTGATAAAACCAGCAGTT
AGGTTGTTGGACTGCTGTAGCACGTCCATGTGATCTCTTCCACAGGGTAACGCGAGTAAC
ATACAATGTTCATTTTCCATCTTCATCTTGCGATGCACCTGGTCGAGCTGCGCGGGCTCG
AGGCGCATGCGCTGAGCGATGCGGAGCAGCGGCGTGGCGAGCTCGTGCGGCCGGGACAGC
GTGTCGCCCGCCACGGCCGGGTTGCCGCCCACGAAGTGCATCTGCACCGCCGCCGAGTCG
TTCTTCAGGGCCAGGAGACCTTGCCACATCACCGGATATCTCCGGAGCAGCATCTGCAGG
GAGTCAGCCTCGCGCGGCACCTGGCTTGCGTGCGGCGGGCCGGGCGGGGCGAGGGGCCGG
CCGTGCGCGGGGGGCGGTGTGCGCGCTCCTCCGTACACGATGAGCCTGTCGGCGGGCGCG
GGCGAGTGCGCGGGTGAGTGCGCGGGGCGAGGCGCGCGCGGCCGCCGCAGCTCCAGCGCC
GGGGTGGGCGTCTCGCAGCCTTCCGTCTCCAAGCGGCTATAAGGTGAAGGCGAGGCACGG
TTCTCATGTTGAGTAGCACGGAAATGTTGCTGGTACATTTGATAATGTTGATGAGAGTAG
TGGGGGTAAATTGAATCACCCACTCCTATTTGACCTTGAGGACTGATTGAAGGTACACTT
GTGATTGAAACTCTGGATCCTGAGCCGGTATGATGAGGCGGCGTGGGCAGGCCGAGGTGC
TTGTGCAGCAGCGGCGGCTCAGGCGGCGGGTGGTGCGCGCCGCGCGGCAGGCTGGCAGTC
GCCGTCGCTATGTACGCGCGGTGACCGCTCTCGCCGCTTCTGATGAGCACGGGCGTGGCG
CGGTCGGAGGGGCGGAGCGGCGCGGGGGCGGGCGGCTCGGCGGCGCGGTGCGGCAGGG
(3838 bp)

- SilkBase 1999-2023 -