SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR20937c1_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_chromatin_assembly_factor_1_subunit_B_[Papilio_polytes]
Ontology
GO:0000790 C chromatin
GO:0002230 P positive regulation of defense response to virus by host
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005829 C cytosol
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006334 P nucleosome assembly
GO:0006335 P DNA replication-dependent chromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0031497 P chromatin assembly
GO:0033186 C CAF-1 complex
GO:0042393 F histone binding
GO:0043234 C protein-containing complex
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:0098792 P xenophagy
Transcript
Level		FPKM:0.95 TPM:0.93
ORF EntryO_TrvaFAMAMG24239_5prime_partial:A_TrvaFAMAMG_TR20937c1_g1_i1
Sequence
(Nucleotide)
GCGGTCCGGGGGGCCCCCGAGCCGGCTGGGGGCTGCGGGCGGGCGGTACGTGCTGGCGGT
GGGCACGAGACGCTCCGTGCTGTTGTATGACACGCAGCAGAGGACGCCCGTCGCTATCGT
CGCTAATGTGCATTATACTAGGTTAACAGATCTGACGTGGTCGAGCGACGGACTATCGTT
AGTAGCTTCCAGTACCGATGGGTTCTGTTCCATTATCACATTCAATAAAGGAGAATTAGG
AGATCCACTACCGCCTGAAAAACTTGAAGATAAACCAGAACCAATGGAAATTCAAGACGA
AAAACTGCCACAAGAAAACCCAAAATCAACAAAAATCGATCCGTTCATCAAATTCAAAGC
TCCAGAAAAGTCTCCCAAACAGAAACCGGCACAGATCAAGACTCCAGTCAAAATGGACGT
TTTAGAAGAAGTAGCGAACCCATCCTGGTCCGACAACAGCAACAATGAAATTATTAAACC
AAAATCAAATGACCAAATGGATACCGAAGTCACTGTTATTGAAGACAGTAATGATATCAA
ACTAGTATACGAAGAAACAGAATTAAATTCTCCGGAAATAAAGAAGACTGAAGCACCCCA
GGACAATCAGTTTTTACGTCAAGCTAAAGTGACTGACGTCAAGCAACCTGCGGCGACTGT
GTCAAGCCCCAAGGCACCTCGTCGCGTCAGTTTCGTTACTCTATCAAGCCCTAAAAATGC
TAAAAAGAAATGATTTAAGTTATGTGTAAATAAGTATTTTATTGGATAAGAGATGTTAAG
ACCTATTTTTATAACTTGATGATATAATAAATGGCGTTGAACTCGCAAATAA
(832 bp)

- SilkBase 1999-2023 -