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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR20936c0_g2_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_heterogeneous_nuclear_ribonucleoprotein_F_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003727 F single-stranded RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0008134 F transcription factor binding
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0017025 F TBP-class protein binding
GO:0030529 C ribonucleoprotein complex
GO:0043484 P regulation of RNA splicing
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:9.84 TPM:9.64
ORF EntryO_TrvaFAMAMG24236_3prime_partial:A_TrvaFAMAMG_TR20936c0_g2_i2
Sequence
(Nucleotide)
CCGCGCCCCCCGCCCCCGCCCGCGCCGTACGCGCGCACCTCCTCGCTGTCGCTCAGGAAC
ACCTCTATGTACCTGTGTCCTATTTTCTCCCTGTCCCTGCTGAGAGCCTGTTGAGCGCTC
TCCTTGTCTACGAAGTAAACAAACGCCTCGCCGGAAGCCCGCCCCGTGTGATCCGAGAGC
AAGTGGACACCGTCCGGTGCCACCGGGATACCATTGAAGAACTGTACTATTTCGTCTTTA
GAGCATCCGTAGGGCAAGCCTCGCAGTTTCACAATGCCCATGTCGTCAGAGACAAAGGGA
ACACTGTCAAATCCATTTTCATTCTGTTTCATGGCATTCAGTGCCCACTCCATGTCTTGC
CGGTCAGTTGCAAATACTTCAATATATCTCTTTCCTAAGTTCTCCTTGTCCTTCTTGAGG
GCCTGATCAACATCTTCTTGACTCTCAACTTCCACAAAACATTCACCAGAGGGACGCCCT
GGACGTACCTCGGTCAGGAATACACCTGCTTTTCCATTGACCACTTTAACTCCATCGAGA
AAATCGAGGACATCTTCTACAGTAGTGGAGAAAGGGAGACCACGCAGCTTCACAATGTAA
CCGCTATCTCCCGACCCCAGCATTGTCATTTGAATTTACTATCCGACAATGTAGTTTTTT
AAGTACTTACAAAAGGTAATATAATTTCCAGAGAAAGCTACTTTGTATTCCTAAAAATTG
AATACAAAACGCGAATTTTATTTGCTTTCAAAACTCAAAATGAGAGAAAATGACAAAAAT
CAAACTTTTTTTTTAAGATTTAATGGCCTGGTAACAAGTCCTTTAAGCCAAGTCCCAGAG
CATTTAAAGTTTTGTCTTTAAAA
(863 bp)

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