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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR20864c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_UBR3-like_[Papilio_xuthus]
Ontology
GO:0000151 C ubiquitin ligase complex
GO:0001701 P in utero embryonic development
GO:0001967 P suckling behavior
GO:0004842 F ubiquitin-protein transferase activity
GO:0005737 C cytoplasm
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007608 P sensory perception of smell
GO:0008270 F zinc ion binding
GO:0009790 P embryo development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042048 P olfactory behavior
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
GO:0071596 P ubiquitin-dependent protein catabolic process via the N-end rule pathway
Transcript
Level		FPKM:8.22 TPM:8.06
ORF EntryO_TrvaFAMAMG24162_3prime_partial:A_TrvaFAMAMG_TR20864c0_g1_i1
Sequence
(Nucleotide)
TTTTTTTAAAGTTATTCATGGAAACACCGAATAGACAGACGAGTTGTTTCTGAATTGCAT
ATTTTTAACAAAACGTAGGAAATTTTACAATTTTTTCGTTATATCGTCATTACGACCAGT
AAGTTTATTTCGCGTAAACGATATATAGTTCGTGTTAATAAATATTTTCAAACCTGAAGC
ATGGTGAACCATGACTTCACTGCAGAGTACAGTTCATTGCCTTATGTAAAACTTGAAATG
GCTTTTCTTCCGTGAGTGACCGAATTAAACGGTGACTTATGTGTTTTATGTGATCTCTAT
TGTTCTGTGAAGAGGTGTAAGTGTTACAATGGCTAATTCAACGGCACAAGTGTTAATGAA
AAAGGGAAAAAGGGGGGCAGCTGCATATATACATGCGGATTGCTCCAGCGGATCACCACA
GCACTTGGGACCACTTCTGGACGTCCTGCTGAACCCTAGCAAGGCCATAGACGAGTGGGA
GACCATCGACTGGTGTCGGTGGCTGCTGGCTGGCGGGAGAACACCGGATGAATTCGCCGC
AATCGTTCGGAGCTACGACAAACACGACAAATGTGGTCTAGTGTGGATACCGCGAGTCGT
TGCCTACCGATGTCGGACATGCGGTATATCACCATGCATGTCCATATGCAGGGAGTGCTT
CCATCGCGGAGATCATTCCACGCACGACTTCAACATGTTCCTGTCGCAGGCTGGTGGAGC
TTGCGACTGCGGGGACAAGTCCGTTATGAAGGAGGATGGGTTCTGCAGCAACCACCGCAA
CAAGTGTCCCCGTCCTGGCACGGCTCCCACAGAACTGATGTGCGTCGCCGAAGCCATGAT
GCCGCGACTAATACTGCGGCTACTGCAACATTTCAGAGAAAACAGTAGTGGGAGCCAAAC
AAATTCTGACAGATGCCGCATAGCGGTCCAGGAATGTGAGGGCTACGTTCAGATGCTGAT
GGAAATCAATAACATGGGCGATCTCATGCGCTCTGCCATGACGAAAGCGCTGATCAACCC
ACAGATGTACAGAAACCTGGTAGTGCCGCCGTTCCCGGACACAGAGTACGGCGCGTACAT
GGCCGAGTCGCACCAAACATACGAAAGAGCTTTAGATCTGTTCCCGGCTCCCGAACCGCC
TGACGAGTACAGTCATCTCCCAGCATTGGCTCCCAGATTAACGCATAACACATTGTTAGA
AGAATTCATATTCTGGACGTTCAAATACGAGTTTCCACAGAACGTGGTCTGCTTTTTGCT
CAATATGTTGCCCGATCAAGATTATAAGGAGCACCTGACCCGCACCTTCGTGCTGCACTA
CGGCCGCATCCCGCTGGTGCTGGAGGCGGCCGCGGACCCCGACACGCTCTCCAACCGCGT
GGTCCACATGTCCGTGCAGCTGTTCTCCAACGAGGCGCTCGCGTTGCGCTGCGTGCAACA
CCTGCACCTGCTGCACGTCATGGTGCTCTCGCTGCGCCTCATGATGACCAAGATCCTCGT
GCAGAACACGCTGCACGACCCGCGCAGAAACTTCCACCGCGTAATCGACTGCACTCAAAA
GGTCATGAAGGAGCACTGCTACTGGCCGCTCGTGTCCGACTTCAACAACGTGCTGTCGCA
CAAGAGCGTGGCGCTGCTGTTCCTGCAGGACGACGCGCTCATCGACATGTGGTTCGAGTT
CCTGTCCATGCTGCAAGGCATGAACGTGAACGTGCGCGAGACGGGCGGGCACATCGAGTT
CGAGCCGTCGTCGTACTACGCGGCGTTCTCGTGCGAGCTGGAGGCGGCCGCGTACCCGAT
GTGGTCGGTGCTGTCCCACCTCACGGCGCCGGAGCACGCGCCGCTCGCCCGCCGCATCAT
CACCGCGGCGCTCTCCTACCTACAGAACTGGCTCGACGCGGTCAACTACACCGAGCTCCG
GGCGGAGCGCGAGGAGGCGATGCGCGCGTCGTTCCACTTCCCGCTGCACCGCTACGTGTC
GTCGTTCCTGTGCGCGGCGGTGCGGTGGCTGGGCGTGCGCGCCGCGGACGTGCTGCCGCC
GACGCCCGTGTTGGCGCTGCTTGCCGCCCATCCGCTTAGAGTACAGAGTCTATTCTACGA
GATCCTGGCCGGTGTGTGGGTGAGGAACGGGCTCCAGATCAAAGGGCAGGCTATGACATA
CATCCAGGCCAACTTCTGCAACTCCATGGTGGACATGGATATCTACTGGCTGCAGATATG
CGCCGCGCACCTCCCGCCTGACCAGTTCATGGATATGTGCATTGATATGTTCGGTGTCCG
TGAATGGCTGAGCATGTTGCCAATGACGCCGGTGCAGGCGGCCGAGCAAGACGCAATGGT
TGAAGGATTGCTCACCTTCCTGGCTATACTCGTCTCGTCCAGGACAAATCTTGATAACGA
CGAACTAACCCAATCTCGATTAGAAGTAAGCACGTTACTAGCGGCCGGCGACAAGACACA
CTCTCAACTACTGGAACTGATGCCCGAGAGATCAGGGAACGCGCACACTAAGAACTTTGA
AACTGTGCTTAAAGAGCTATCAACATACCGCCCCCCTCCAAAGGGGTCTGAAAACCTAGA
ACAAGGTCTGTTCGTTCCGAAACCGATAGTATGGGAGCAGTACTACGATCCCTTACATGT
ACTACGGAGGGCCGTGCACAGGAGGGACTTCCACGCTTCTATGGAACGATTTACTGCTTA
CGTCCGCGAGAACAAGAAAGGGTCGGGCACGCTATGGCCGCCACTACGCGTAGCCGAGGT
GGGCGAGACGGGGGCGGGGTCACCGCGCGCCGTGTGTCGCAGCGGCGTGCTCCTCGGCGC
GCTGCTCGGCGTGCTGCACCGCGCCGTGCACCGCCGGGCCGCCGACCAGCCGCCGCCGCA
CGCCCCGCCGGACCACGTGCTCGCACTCGCGCTGCACCTGCTCGACGCCGCGCTCGCGCC
GCCCGACCACGCGCCCGCCGACCCGCACACTTGCATGGTGTTGCAGAGAGGCGGCGAGGG
CTCCGCGCGCGTCGTGTCGGGTCGCGGACTGCTGGCGGCGCTCGGCGGCGTGTCGCTACC
CGACGCACTCACCACGCACGTGCTCGCCGTGCCGCGCCCCGCCCCGCCCGCCGCGCACCA
CCCGCCGCCGCCCGCGCACTACGCGCCCTCCGACAGTGACACGGAATGGGAGCCATCAGA
GTCTGACGCGGCTCGCCTGCCGTCCCTCACCACGGCCACCGGCTTCGCGACCAGCACCGC
GCTGGCCGTGCCCACGCCCAGACAAGTTATACAGATGGCTCGAGCAGATTCAATACCGGA
AGATCGATCTGACATTGCCGAAGTCATGCCTTACGTACGAGCTTTGGAGGGTATAATAGA
GGACGAGAGTCGCGCCCTCGCGTTACAGTCGTCCGACTCCGAGATGAGTCTAGCGCTGCC
GGTCTCATCGGACCTGGACACGCCGCCCGTACCCATCGAGTACGACACAGAAGGTCCGGA
TTGGGGTGAGCCGCCGGCGCTCCCCGCCCCTCCGCTACTCGACCTACCCTCCACCAGCAA
CCACGTCACGCAGATGGAACTACAAAATCAGCCCGAAGAAGACTCGATACCGGTCAACGA
ATCGATAATATCATTACTACTGAAACTACACTCGCAACTGTCGGGGAGACTCGACTCGTT
CTCACCCGACGAGCCCGCGCCCAGCAATAACGAACTCATCGGTGACGGTCCATTCTGGAT
CGGTCGCGTGCTGCGACGCATTTGCGCCATGGACCCGCGCTGTGCACACCACGTCGAGCA
CGTGCGCGCGCAGCTGTGGCCGCACCAGCGAGAACGACACGCCGAACACGTCGCCAGGGA
GCGCGCCGAGAAGGAGGAGCGGTCGCGGCGGGCGCGCGAGCGACAGGAGCAAGTGATGCG
GGAGTTCGCCGCGAGACAACAACGGTTCCTGTCCAGCATGAGGGACATGGAGCACGACGA
GTGGGAGGACGAGCCGCTCGAGCCCGACTACACGTGCGTCATCTGCAACACGTGCGCGCC
CGCCGCCGAGCACGACCCCGTCGGCCTTGTCGTGCTCGTGCAGGCCAGCAGCGTGCTCGC
ACACCGCGCGCCCGCCGGCGCCGAGCCCGCCG
(4112 bp)

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