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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR20795c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		meiotic_recombination_11_[Bombyx_mori]
Ontology
GO:0000014 F single-stranded DNA endodeoxyribonuclease activity
GO:0000781 C chromosome, telomeric region
GO:0000784 C chromosome, telomeric region
GO:0000790 C chromatin
GO:0000794 C condensed nuclear chromosome
GO:0003677 F DNA binding
GO:0004003 F DNA helicase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004520 F endodeoxyribonuclease activity
GO:0004527 F exonuclease activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006281 P DNA repair
GO:0006302 P double-strand break repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006974 P cellular response to DNA damage stimulus
GO:0007062 P sister chromatid cohesion
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0007129 P homologous chromosome pairing at meiosis
GO:0007507 P heart development
GO:0008022 F protein C-terminus binding
GO:0008283 P cell population proliferation
GO:0008408 F 3'-5' exonuclease activity
GO:0016605 C PML body
GO:0016787 F hydrolase activity
GO:0030145 F manganese ion binding
GO:0030870 C Mre11 complex
GO:0031573 P mitotic intra-S DNA damage checkpoint signaling
GO:0031860 P telomeric 3' overhang formation
GO:0031954 P positive regulation of protein autophosphorylation
GO:0032206 P positive regulation of telomere maintenance
GO:0032508 P DNA duplex unwinding
GO:0032876 P negative regulation of DNA endoreduplication
GO:0033674 P positive regulation of kinase activity
GO:0035861 C site of double-strand break
GO:0043066 P negative regulation of apoptotic process
GO:0046597 P negative regulation of viral entry into host cell
GO:0048471 C perinuclear region of cytoplasm
GO:0051276 P chromosome organization
GO:0051321 P meiotic cell cycle
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:5.47 TPM:5.36
ORF EntryO_TrvaFAMAMG24123_3prime_partial:A_TrvaFAMAMG_TR20795c0_g1_i1
Sequence
(Nucleotide)
TTCAAGTTTTCGCTTTTGATTAGCATTGGCGGCAATTCACGGATTTTTGTTTCAAATAAA
TAGATATTCTCGTGGTAAGATTTGTTAAAAGTACACGATGATAGAAAACGACTTAAATTC
GTGGTCCACTGATGACACACTGAGAGTATTGATAGCTTCTGATATTCATCTAGGCTACAT
GGAAAATGATCCAATACGCGGAGAAGATAGCTTTACAGCTTTTGAAGAAGTTTTGTCCCT
TGCGGTGCAATGCGATGTCGATTTGATACTTCTTGGAGGAGATTTGTTTGATCAAGCTAA
ACCTTCGGTCAATTGTATGTTTAAATGTACTGAAATAATCCGAAAATATTGTCTTGGAGA
TAAGCCGGTCAGTATCGAATTGCTTTCTGATCAAATTAAAAATTTCTCCAGAGTTGTCAA
CTACGAAGATCCTAATTTGAATATTTCGTATCCTATTCTTTCTATTCACGGCAATCACGA
CGATCCTGTCGGCCAGGGCAGCGTGAGCTCTCTGGATATACTATCAATCACTGGATTGGT
TAATTATTTCGGCAAATGGACTGATTACACACATGTATCAATATCACCTGTCCTGTTTCA
AAAAGGTCTCACTAGGCTTGCGCTGTATGGTCTAAGTCATCTGAAGGATCAAAGACTGTC
ACGACTTTTTGCTGAAAAGAAAGTTGAAATGGAAAGACCTGATGAAACATTGGATTGGTT
TAATTTGTTTGTGTTGCATCAAAATCATGCTGACAGGGGACACAGCAACTACATCTCAGA
AGGAGTTCTGCCCAACTTCCTCGACCTGGTAGTGTGGGGTCATGAGCATGATAGCCACAT
ATGTCCAATGAGAGGCAACAAGAAGGAGAAGGATAGCTTCTGTGTGGTGCAACCTGGCAG
CACCGTGGCCACTTCGCTCGCAGCGGGGGAAGCCCTTCCCAAGCATTGCGGTCTTCTAGA
AATACATAAAGGAGACTTCAAACTCACTCCTCTCCCATTACAAACAGTGAGACCTTTTAT
ATTCAAAACTTTAGTACTCTCAGAAGAAAATCTTGATAGTGATGATGTCAACGAAAATGA
AAAGGTTCAAGAGTTTTTAAAAAATAGCATTAATGGAGCAATTGATGAAGCTGCTAAATT
AAGAAGTGGCAATCCTAAGCAACCCTTATTACCACTTATTAGATTAAGTGTATTTTATGA
AAGAGAAAGCCAAAACTTTAACCGAATACGCTTTGGACAGAACTTTAATGGATTAGTTGC
CAATCCTAATGATTTACTTATAATGAAAAAGGAGAAAAAAATAAGAGAAAAGAAGGAGAG
AGATCCTGTAGAGGAAGCAGACATGACAGGAGTGGCTGCCGAGGCAGCAGACGTAGAGTC
TCTGCTACGTGCTTACTACGAGGCCCAGCCACGAGACAAGAGACTCTCTGTGCTGTCCGT
GCGCCTCGTTACTGAAGCAGTTAGAGATTTCACTCTTAAACACAATGAAGATGTTCTCCG
TCGTGCATTTGATGCTCACAAGCGCCGCTGTATTGCCGCTCTGCTGGAGTCTACAGCTGA
AACTGAACAAGAAATTACAGAACAACTGGAGGTTTACAAACGAGAACTGGATGAGGCAGA
CGATGAGAAACTCCACACTTTGGTAGACGCAAGCGCCAAGCAGTCGGCCCCCGCGGCCCA
GCTCATAGTGCCCGTGGTGAAGCTGCCCAGCAACGTGGGCCGGCGCACCATCGTGGTGCT
GTCGAGCGACGACGAGGAACTTGTGGCGACGCGGAGCCGCGGTCGCAGCACGCGAGCCAC
GCGCGGCAAGTCGCCCCGCGCCGCCCGGGGCCGGACCAGCGCCCGCG
(1847 bp)

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