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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR20758c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ATP-dependent_RNA_helicase_WM6_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005700 C polytene chromosome
GO:0005875 C microtubule associated complex
GO:0006338 P chromatin remodeling
GO:0006397 P mRNA processing
GO:0006406 P mRNA export from nucleus
GO:0006974 P cellular response to DNA damage stimulus
GO:0007052 P mitotic spindle organization
GO:0008380 P RNA splicing
GO:0010501 P RNA secondary structure unwinding
GO:0016607 C nuclear speck
GO:0016787 F hydrolase activity
Transcript
Level		FPKM:51.29 TPM:50.25
ORF EntryO_TrvaFAMAMG24091_complete:A_TrvaFAMAMG_TR20758c0_g1_i1
Sequence
(Nucleotide)
GTCAAAAGTAGACGCCAAAAAAACCGAAGCCGCCATTTAGGTAAAATATTTTGTAAAAAT
AAATTTCACGTGCTCACAGTGAGTACGTTAATTTAATCACATATAACATACTAAACAAAA
TCATGGCTGATAACGACGACCTTCTCGACTACGAAGATGAAGAACAAGCGGATCAGCAGA
CTGCCGATGGGTCAACGGAAGCGGCGCCAAAGAAGGAGGTTAAAGGATCCTACGTATCTA
TCCACAGCTCCGGTTTCAGAGACTTCTTGTTGAAACCAGAAATACTCCGAGCCATCGTTG
ACTGCGGTTTCGAGCACCCTTCAGAAGTACAACACGAATGCATCCCGCAAGCGGTCCTCG
GTATGGACATTCTCTGTCAAGCCAAGTCCGGTATGGGTAAGACTGCGGTGTTTGTTTTGG
CAACATTGCAACAGCTGGAACCCTCTGAGAACCACGTCTACGTGCTCGTCATGTGCCACA
CAAGAGAGTTAGCTTTCCAAATCAGTAAGGAGTACGAACGATTCTCCAAATACATGTCGG
GGGTCAGAGTATCAGTATTCTTCGGGGGCATGCCAATACAAAAGGACGAGGAAGTCTTGA
AAACAGCATGCCCTCACATAGTTGTAGGCACTCCCGGGAGAATCTTAGCTTTAGTAAACA
GCAAGAAACTAAACTTGAAGCATTTGAAGCACTTCATCCTTGATGAATGTGATAAGATGT
TGGAATCTCTAGATATGAGGCGGGATGTTCAAGAAATCTTCCGCAACACTCCCCATGGAA
AACAAGTAATGATGTTTTCAGCCACATTGAGCAAGGAAATCAGACCAGTGTGTAAGAAGT
TTATGCAAGACCCTATGGAAGTGTATGTAGATGATGAAGCCAAGCTCAAGCTGCATGGAT
TGCAGCAACATTACGTTAAACTAAAGGAGAATGAAAAGAATAAAAAGCTATTTGAATTAC
TTGATGTCTTGGAGTTTAACCAAGTGGTTATATTTGTCAAGTCGGTACAACGTTGCATAG
CACTGGCACAATTGCTGACAGATCAGAACTTCCCCGCTATTGGCATCCACAGAAATATGA
CGCAAGATGAGCGTCTCTCCCGTTATCAGCAGTTCAAAGACTTCCAGAAGAGAATCCTAG
TAGCTACCAACCTGTTTGGACGAGGAATGGACATTGAGAGAGTGAACATTGTTTTCAATT
ATGATATGCCTGAAGATTCCGACACATACTTGCATCGTGTTGCAAGAGCAGGAAGATTTG
GTACCAAAGGTCTGGCCATCACAATGATATCTGATGAAAATGATGCAAAGATCTTGAATC
AAGTACAAGATCGTTTTGATGTTAACATTACTGAGCTGCCAGAAGAAATTGAGCTCTCCA
CTTACATTGAAGGACGATAGACTTAAGTTTCATTCCCCTTTCTACCTTACTGTGGCTTTC
ATTGTCTATTTCTAATCTGACTGTGTTCTAATTTTGATTTGTATAACATGGAGCCACATT
TACTGTTTAACTAGGATTAACTAATTAAAGTGACATTTCATATTGTGAAAAAAAA
(1555 bp)

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