SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR20752c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_protein_crooked_neck_[Bombyx_mori]
Ontology
GO:0000245 P spliceosomal complex assembly
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0000974 C Prp19 complex
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007405 P neuroblast proliferation
GO:0007417 P central nervous system development
GO:0007422 P peripheral nervous system development
GO:0007438 P oenocyte development
GO:0007443 P Malpighian tubule morphogenesis
GO:0008347 P glial cell migration
GO:0008366 P axon ensheathment
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0022008 P neurogenesis
GO:0030154 P cell differentiation
GO:0044822 F RNA binding
GO:0048663 P neuron fate commitment
GO:0051298 P centrosome duplication
GO:0071010 C prespliceosome
GO:0071011 C precatalytic spliceosome
GO:0071012 C catalytic step 1 spliceosome
GO:0071013 C catalytic step 2 spliceosome
GO:0071014 C post-mRNA release spliceosomal complex
GO:0072686 C mitotic spindle
Transcript
Level		FPKM:8.31 TPM:8.14
ORF EntryO_TrvaFAMAMG24084_complete:A_TrvaFAMAMG_TR20752c0_g1_i1
Sequence
(Nucleotide)
TTTTTTTTTTTTTTTTTTTTTCTTATTTATTAGTTTTATTTCATCTTATATCTATTCAGC
CGTTGTTGTCTTTTCCTCGCTGTTTTCACTTGACTCACTGTCATCATCATCATCATCATT
GTCAGGTGTTCTGGGTTCTATGTGTTCTGCTTCTGTTGTTTCAGTGTCTGTTGTAGGTAC
TTCTTGTTTCTTACGCCAATTCTTTGCAGCAGCAAGTAGTTTAAGGTTAGGTTTCACCAT
CTCGTCTTCTGGGAAGATGTAATCAAAAACTTCTTCCCATCCTTCTTCAACACCAGTTTC
ACTAATAATCTTTTGCCTTTTCTTGACACGTCTTGGCATTTTGTTAAGCACTTTTTCAAG
TTTCACATCATCTCCAATTTCTGTTTCAAACTCCTTCCATGCTTCTAACAATAGAACCCT
AGATTCTTTCTCACCTGCACTCCTAAGGTTGTCATTTGCTCGTTCATACACACGCCTTGC
TAGTTCAATGTTAATATTATCTGGGTTTTCAGCATTTAGTTCAAACTTTGCATAAGAAAG
CCATACTTTGACGTGAACTGTTCTCTCTAACAGTCTTTCGTAAAGTTGTCGCGCTTTTTC
AGTTTCGCTTTGTGATACTTCAAAGTCTATATAGCTTTTCCATAGTAATTCTGGCATGTC
TAATCTTGGTTGGCCTACAGCTATTTCATATATTGCTCTGGCACGGTCTGTATCTCCCAG
CAGAGTTTCTAACTCTGCAAACTTTATCCAAGTAACACAATTTTCAGGTCCATATTCTAA
AAACTTCTGGTACAATATTCTACAGCGATCAAACTCTCTCAACTGAATTTCAAGGTCAAT
GTAACCTCTATAGAGTTTATCTTTTGGACACATTCCAAGAGCCATACCAAGTGTTTTTCT
TGCCTGTTTTAAATCTTTGCACCTCACTTCAAACTGTGCATACATAAGCCATATCTTTGA
GAAGGTAAAAATCTTATGAGGTATTAATTCTAGGCATGTTCTGTAAACTTGTCTAGTTCT
TTCTAAATCTTCTGCTTCTAGTTCTTCATATAAAGCATAATTAATCCATAAATATATGTA
GCGTCTCCAGAATTGTTTGTCTTTTGATGGAGGAACATTGGCAATTGCTCTTTCATATGT
ATCTCTTATGTCATCTAGATTGCCCTCATTCTCTACTAATCTGATATAATCAAACCATGC
ATCATAATTAGTTGGATTCTCTATAACTTCTTGTTCATACATGTATTTTCTCTTATTCAC
AATGACATCCTCAATGCCAGATCTATCTCCATACTTCTTTTCATGAATGGTGTAGGCTTT
ATAAAGTTCTTTATTTTTGTCTTTTGGAACATGATCAAGAGCATATTTGTATATCACTCT
AGCTCTATCATGTTCTTTTTGATTTTCTTCAAATTTAGCAAAAGCTATAAACAATCTTTC
ATCCAATTCTTCATCACCAAAAAATTCTACAGCTCTTTCAAAAACTTTTCTGGAACCATT
TATGAAACCATGGTTTTCTTCAAATTTTGCATATTTAATCCAATTTTTTACATCTGGATG
AACCATTACAAACCGTTCATAAATCTGTCTAGCTCTGTCCAGTTCTTTATATCTCAACTC
AAAGTTTATAAATGTTTGCCAAGCTTGTTCATCTGGTTGCCATTCCATCCAGCGTTCAAA
TACCTGTCTTGCTCCAGCTACGTTTTCCAACATTTCTTCCATGTATGTGTATTTGTACCA
AAACTGAGAAACTCTTGGGAGAATTGTAACTGCTCTGTCCCATAAATTCCTTGCATGATT
GACTTGTCTGTTTCTCATTTCCATTTCAGTATATTTCAACCATAAGGTAACATTTCTATG
GTCGACGTCCAAGGCTCGTTCATAAATTGAACGAGCTCTTTGGATTTGCTTCTGTGATTC
TTCCCATTGAGCATATTTAAGCCAATTTCCTATAACAAGTCTATTCTTTCTGATATTATC
CTCAAAAGCTTTACGTTTCCGATGTTGATAATCACGAAGTTCTTCAGGATCGGAGATTTT
TTGTTTCGGAGGAGGCGGTAATATTTCTAGATCTCGTTCTTTAGCCTCTCTAAGTAACTG
TTCAGCGGTTATCTGAATTTCTGCGGGCGCTTTATTTTTTACCTTTGCCACTTTGGGCAT
TTTAGTAGTTTTGGTTTCCATGATGATATTCTAACTTGAAATAGAATCTACAAATTTCTA
TACAAATTAACAATTATCTGTTGTATTTTCTCCGCAATTGAGTTATTTTGATTTATTATT
TGAATGTTTAGAGAAATTTTGGTTGAAAATTAAAATCCACAGAGAGATGGCATTTTGAAG
(2340 bp)

- SilkBase 1999-2023 -