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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR20363c0_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_protein_kinase_C_and_casein_kinase_substrate_in_neurons_protein_1_isoform_X2_[Amyelois_transitella]
Ontology
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005802 C trans-Golgi network
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005901 C caveola
GO:0005911 C cell-cell junction
GO:0005925 C focal adhesion
GO:0006897 P endocytosis
GO:0007165 P signal transduction
GO:0008092 F cytoskeletal protein binding
GO:0008289 F lipid binding
GO:0016020 C membrane
GO:0019898 C extrinsic component of membrane
GO:0030036 P actin cytoskeleton organization
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0032587 C ruffle membrane
GO:0036010 P protein localization to endosome
GO:0042802 F identical protein binding
GO:0042995 C cell projection
GO:0043231 C intracellular membrane-bounded organelle
GO:0045806 P negative regulation of endocytosis
GO:0048858 P cell projection morphogenesis
GO:0055038 C recycling endosome membrane
GO:0070062 C extracellular exosome
GO:0070300 F phosphatidic acid binding
GO:0070836 P caveola assembly
GO:0072584 P caveolin-mediated endocytosis
GO:0097320 P plasma membrane tubulation
Transcript
Level		FPKM:38.47 TPM:37.69
ORF EntryO_TrvaFAMAMG23992_complete:A_TrvaFAMAMG_TR20363c0_g2_i1
Sequence
(Nucleotide)
TTTTTTTTTTTTTTCACATATGTAATAACAATTTATTTTACCAATATTATTAATATATTA
ACATAAGTGGTCCAGAACCACCTCTCTGATAATAATATAATACAAATAATTTTCACAAAG
GTCGCTGAACCCATAACAATGAATACAAACAGTAACTAACGCGAACCAAGTCGAGTCTAA
ATCGTAATATTCAGCCTCGAACTAAATATGTTATAATTACAACAATAACACGAGGTACAA
AAGGGAAAAGTAAAATAAAGGTAAACATCTTCGTAATATATTAATGATATTTTGTTTATA
ACTAACGAGAGGGCGCCTCGAGCGACGTGACTGAGCCGATACAAGCGGGTCTGAGTAGAC
ACAAGCTGGGTCTGAGCCGATACTAGCTGGGTCTGAGCCGACACTAGCGGGACTGAGTCA
TAGTAGCGGGGCTTGCAGGGTCTGGGACTAATAGCACCGGCCGATGGAAACACGCAGTCA
ACATGGAAGTTTACACCGTTAGGCCAATAATCAGTCAACACTACGCCCTATCGTATTATT
CTACAAGTCTGATTTATATCGATAGTAATCAAATGTTTCCATAACGCTGGAATAAACAAT
CAATTTCTGTCGATATAATTCCAACTAAAACTTAAAACTGTCATAAATTACACGTTATAT
ACAATGGGAAATAAATACTCTATACATTCACGACAAGTATATAATATTAAAATCGTGTAT
GTACACAACCACACCTACATTACAATGACATCCACCGACAGGAGTTTATATCACAAAATA
TATATAATATTATCCCATTGCCATCTAAACGTTTGGTTTGCCTATTATTATATATTTATA
TATTGGCGTACACTTTTTGGCTTAGCTACATTCAACTCGCCCGTCTAAGGCAGTGGTGTC
CGATTTGTTAGTCTAAAGCTTTGTTCGAAGGTGTTATTTAGATAACAAAGTATATAGAAA
TATAACATGTCACTAACACAAAACATTTTTGGTTTAAGTGCAAATTGTACCTACAATTTT
TATCCAAAAATATACGTTCTAAGTCAATTATTCATAAACAGACGTGCAGTCGTCCTTTTT
TATTTATATTTCACATTTATCTTTATACGAATCATCGATTTATATCTAGTAAATTAAATA
TCGATATATTTTTATCAAACTACGGTACCTCACTATTTAACTGTAGCAGTATTCTACAAA
AGCGTGGAATACTCCGCGTAGACACAAGTACATAAGTCAGAAATGTTATATAATATTTCG
CTGTATATTTTGTCTAAATACATCAAAACACTTCAACATAGATTTGTAATTCGATGAAGC
GTAGAGTTGATAAAAACAACATTAAATTAATGTTCTCACATCACTCACTATGATGTTATC
GTGTATTCTAATGACTAATTCGTGACTCACAAATAAAGTAATTATATAGATATCCGTCAA
TCTAAACGATGGTACCACACGCCATTTAAAAAAAAACAACTGATTTATATTGAAGATTTT
CTGTAAAAATCGTCAAGAAATACAGTTTTGTATAATGTGTAGTCACTGTTGTATAATATA
GTCCGGGTTACATTCAGTCAGGTTGTGTGGCGTGTGCGTGCGTGCAGGGGGCGGGGCGAG
GGGCGGGGCGGGCGGGGGGCGTGGCTAGTGTCCGACGGGCTCCACGTAGTTGGCGGGGTA
GAGTCCCACGCGCCCGTCCTTGCGTCCCTTGCACCATCCCTGCTCGTCTTCGTCTTCCAA
TTTTTCAAATACATCGCCTTGTCTAAATGACAGTTCATCGCTCTCCGCCCCGGTGTAGTC
GTAGAGCGCCCTGACGGGCAGGCCGGGCTCCCCGGTGTCGGCGAGCGCGCCCCCCTCCTC
GTCCCACTCCTCCTCGTCGAAGGGGTTGTCGGCGGCGGAGCGCGCCGGGGACGACTTGTT
CGACTTCACGCCGCCGCCGCCCGCATTGCCGTTAGTGACAGCGATGGGTGCGCTAATGGT
CTTCTTGTCTATGGTATTGTTCGCGCTCGTGTTGTTGGCGGGCGCGGCGGGGGCTGCGGC
GGGGGGAGCCTCAGAGTGATTGTTGCTCTTCAACGTCTTGTTATTCGTTATTGGTGGTAA
TTCATCCTCGCTGACCGGGCGCTGATTGAGCAGCGTGATGGGTCCGGTGGGCAGGCTCTC
CTTGGACTTGCCCTTGGCGATGTCGCGGAACTCCTCGGTGTACTCCTCGAACTGAGGCCA
GCCCATCGCCATGTTGACTCCGTGGTTGTTCGCCCACCACTTCAGATCCTTTCCGCTGTC
AGCGTTGTTGATCGTGTGGTGGAACTCTTCGTAGATTTGCGGTAAACTTGGTTCTTGACT
AATATTGAGGCATTTGTGGAAACTAAACAGTACATCTTTGAAGAATTTCAACCGCTGCGC
TTCCATTTGTTGGCACTTATCGAATACTGAAGTCATGTCCTCGATGTACCGAGGGTTATA
CGCCGTGATCTCCGCGAGAGCTGCCTGATATTTCTCTCTGTTCTTTGAAACTTCGTCGCG
ACATTTCGTTACGCGATCCGCCATTTTCCTTACCTGATCTGGACTAAATGAGCTATCTCC
AGTTGCATTTCTTTCTTGGTTTTGCGCTGTCCGTTCCTGTTTGCAAGCCGTGTGATACTC
TAGTCTTGCCCGTTCCACCTTCTGAAGTAACTTCGCCCAGGGTTTCTGAGCTTTCTTGAA
TGCCTCGTCCATTTCTTTGCGTTCTTTCAATTGGATCATTGACTTATGATAGGTTTCTTT
CTGCCAGTTCTTGATCTGTGCCATGACGTCGTTGACGAGTCTGTCCCTTACGCTGAGGTG
GAGGTCTGACAAACGTTCAGCTTCGACCATGCTGCCTTTCCAAGCTGCTTCCATCGTACC
ATACTCTGGTCCTTTTTCAATAAGATCATTCCATTTCTTAGCCCATCCTCTAAGGCTCTT
CGCATACGCCTTCTCAATCTCGGCGCGTTCTTGCACCAGTGTCTGCAGTTCGCTGCACAG
CCTGTGTCCATCGTCGACCCTCTTGGTGGTCCGCTTGTAGTTGCCCGGCTCCCAGAACGA
GTCGGAAGTGGTCGTGAGCAACGCATGCTCGTCGCTGTGGTGCGACATGGCGGTGCGACA
CTCACACACCGCCCCTACGTAAGTAAACCGAACAGTGTGGCGATGCTGCGACTTGCACGT
GAATCAATATTTCATTGATACACTTGCCAGCTTTTCACAATCAATTAGTCATAAAAATTA
AATAAACCGTGATTAGTAATCCAATATTTTATATTCCACTGATCCTATTACAATGACACA
ACAATCATTCTCGGCCAAAAAACACTGGCAGTTTAGTCACCATGAAAACACAAATATTGA
ATTTAATTTGGATAAAACAATTATTTATCACTATAAATACAATTAAATTAACTTATTTTA
TGATATATCACAAATTCAGCAAAGCTTCAATCACTCCGCACAACTCCAAACATCGGCCAT
CACTCGGCTCTGAAGATGATCG
(3502 bp)

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