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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR20156c1_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_lipophorin_receptor_isoform_X4_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001666 P response to hypoxia
GO:0001948 F protein binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005905 C clathrin-coated pit
GO:0006629 P lipid metabolic process
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0007507 P heart development
GO:0007584 P response to nutrient
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0009725 P response to hormone
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0021517 P ventral spinal cord development
GO:0021987 P cerebral cortex development
GO:0030229 F very-low-density lipoprotein particle receptor activity
GO:0032496 P response to lipopolysaccharide
GO:0032869 P cellular response to insulin stimulus
GO:0034185 F apolipoprotein binding
GO:0034189 F very-low-density lipoprotein particle binding
GO:0034361 C very-low-density lipoprotein particle
GO:0034436 P glycoprotein transport
GO:0034437 F obsolete glycoprotein transmembrane transporter activity
GO:0034447 P very-low-density lipoprotein particle clearance
GO:0038025 F reelin receptor activity
GO:0038026 P reelin-mediated signaling pathway
GO:0042149 P cellular response to glucose starvation
GO:0042493 P response to xenobiotic stimulus
GO:0043235 C receptor complex
GO:0045177 C apical part of cell
GO:0045860 P positive regulation of protein kinase activity
GO:0048306 F calcium-dependent protein binding
GO:0048471 C perinuclear region of cytoplasm
GO:0048813 P dendrite morphogenesis
GO:0071222 P cellular response to lipopolysaccharide
GO:0071347 P cellular response to interleukin-1
GO:0071456 P cellular response to hypoxia
GO:1900006 P positive regulation of dendrite development
Transcript
Level		FPKM:1.95 TPM:1.91
ORF EntryO_TrvaFAMAMG23846_complete:A_TrvaFAMAMG_TR20156c1_g1_i2
Sequence
(Nucleotide)
CGCAGTGCCACGACTCGGTCGCGGTATCCAAACATACTGTGCCGTACGTCACGCATGCGT
CACCGCCATCTAGCGGAGAGCGGTGTAATATCGCATCACCTGCCTGCCTCCGACTCGCTC
GACATTTCTCCGTCGCGCTCGCACTACTGGCACGTAAAATTAACCTCAAAGAGCTCTTCG
CGATCATCAAATCATCAAAATACTGTCCTTCGTTGCAATAATAACAGTGACATTGACTGT
ACAGGTGCAAAATAGTATTGTGAATGTGACATAACCTCGAATCGAGGCTGGATTTTCAAG
TACAGTGTCTAACAAAAGTGATATTGTTAAAATCGAAAGTTTCTAGCGGACGAATGTCCC
TTTTCGTGGGCTGTCAGCGGGCAGCCCAAAATATTTGTGGCAAGATGTGGTGGTTTATTT
ATTTATTATGTGTTTTGAACGTTAAAACATTTGGAGTGTCAGCATCTAACAACAACAGTA
TTGTATTCGCGAATGGCGTCTGTGCTTCCAAGCAGTTCCAATGTGCGAACGGGAGGTGTA
TACCGGTGTCCTGGGCGTGCGAAGGAAACGACGACTGCGGAGACAACTCGGATGAAAGCA
TAAATGAATGTTCAGAAAGTCGCACCTGCACAGCTTCAGAGTTCCGTTGCAAAACTGGGA
GGTGTATACCGCTGTCGTGGAAATGTGATAGTGAAAAAGATTGTTCGGATAGTTCCGATG
AAGACCCTACTATCTGCAAAGCGGATTCAAGAACGAAGTGTTCGGAAGACTATATTTTTT
GCTCAAATGGTGGTCCGTGCATCCCTGCCTCATGGCGTTGCGATAAGTCGATTGATTGCC
CCGACGGTTCTGACGAACTCCAATGTGATGAGACTTGTCGTTCCGATGAGTTCACCTGCG
GAGACGGGAAATGCATTCAGATGCGATTTGTGTGCGACGAAGACTATGATTGCAATGACA
ATAGCGACGAAGCGAAGTGTCCCACACCGACTTGTCAGCCAAGAACCCACTTCACATGCA
CGGACGGGAAATGTATATCGGCGTGGTGGCATTGCGATGGCAGTATTGATTGCGATGATG
GAAGTGATGAAGAGGGTTGCCAAACGACACCTAAGCTTCGATCGCCATGCACCTCAACAG
AGTACGAATGCAAGGACCGTATCACGTGCGTGCACGAAGCCTGGCTCTGTGACGGTGAAC
GCGACTGTCCAGACGGAGGCGATGAGTCTCCCGCAGTGTGCCGCGGAAACATCACGTGCA
GGGTGGACCAGTACCAGTGCAAGGACCGTAGCTGTATCCCTGGGGCTTACTACTGTAACG
GGGTGAAGGACTGTCCAGATGGTAGCGATGAGTTGGATTGCACACGTACTAAAACTATAT
GCGACAAGAAAACAGAATTCGACTGCGGCGAAGGAATGTGCATTCCACTATCCAAAGTGT
GCGATAAACATCAAGATTGTCCCAACTTAGAAGACGAGCCGAGAGACAAATGCGGAGAAA
ACGAGTGCTTGACGAACAACGGAGGATGCTCTCAACGATGTGTAGATAAACCCATAGGAT
ACTATTGCGACTGTGAGAAGGGATTCAAGATTGTCGGTAACAGTACTTGTGAAGACATCG
ACGAGTGCAAAGAACCAGGATCTTGCTCCCAGATTTGCATCAACGAAAAGGGCACATTCA
AATGTGAATGCCACTCAGGTTACGCTAAAGACCCTCGCGACAGAACCAGGTGCAAGGCCA
CAGAAGGACATCCATCTTTGCTCTTTGCAAGACGTTACGACATCCGTAAAATAAGCCTCG
ACCACAATGAAATGACGGCGATTGTAAACGACACCAAATCTGCGACGGCACTCGACTATG
TTTTCAGGACTGGAATGATCTTTTGGAGTGATATTACCGACGAAAAGATTTATAAGGCTC
CAATAGACGAAGGCACGCAAAGAACAGTCGTCATAGGAGAACAGCTAATCACGACCGATG
GTCTAGCCGTGGACTGGGTCTACAACCATCTATACTGGACCGACACCGGTATGAACCAGA
TCGAACTGGCTGATCTACAAGGGAACATGAGGAAAATACTCATAAGAGATGATTTGGAAG
AGCCACGTGCTATTGCACTGAATCCTTTGGAAGGGTGGATGTTCTGGACCGATTGGGGTC
AAGTCCCGAAGATTGAACGTGCTGGCATGGACGGTACCCATCGACAAACCATAGTGTCTT
ATGACGTCAAGTGGCCCAACGGTCTTACATTGGATCTTGTACGAGAAAAGGTTTACTGGG
TGGATGCTAAACTGAACACGTTGTCATCGTGCAACTACGACGGTTCCGGTCGCAGGCTCA
TCCTGCACTCCACTGAAGAGCTGAGGCATCCGTTCTCGGTGACCACCTTCGAAGACTGGG
TGTATTGGACCGACTGGGACAAGACTGCCGTGTATCAGGCCAATAAGTTTACTGGGAAGG
ACGTTAAGGCTATCACCAACACTCATACGCTTCAAAATCCTATGGTGATTCACGTGTATC
ATCCGTACCGGCAACCTGATGGTGTGAACCACTGCGCTGCGGTCAACGGCCATTGCTCTC
ATCTCTGTCTACCCGCACCGAGGTTTGGACCCAACTCTCCTCGTGTTTCCTGCGCCTGCC
CCAACGGACTGAGACTGCTGCCCGATAACCAGATGTGCGTCGAAGACAATTTGCAAAACG
AAGATGTCGGAGATAAGAGTCCAAAGAGAATAGTAGATGATAACGAAAATCATTTAAGCA
GGCATGCCAAACTGCTAAATTCAAAAGTGATCATACGGGTTTTGTGCGTGAATTATTAAG
AGGAAAGCATTAGCCATATGTGGAAAATATTGAGAGAAGGAAGTGCCCTTCTCCTCAAAT
TGGCACACGACGCTAGAAAAGCAGATCTAGCTGAAACAGAAGAGACTGAATTAGAAACGG
AAACAGTTCCTACTATACTATCTAAAATCGAGCCAATGCGGGTCTACTGGGACAATGATA
AAAAAGATCTTAAGAACAACAATCAACCACTAATTGAACTTTATCTGGAGAGTATACCAG
ATAAAACTGAGAAGCCTGTTAAAGAAACTCATTTCGAATATGAAAACATATTCACAGATC
AATCGCCTCTGAAAGATTTAATATTTAATGGTGTTTCGGAAACACCGAAGGTTGGCACTG
GAATCTCAAACAGCGGTCGCGATGCTGGCATGGTCGCCGGTATTGTTGTTGCGGTGATAT
CTGGAGTTATACTATTGGCAGCAGTGATCGCAGGTGTTATGTACAGACACTACGTGCATC
ATAACGTTACATCGATGAACTTCGACAACCCCGTTTACCGCAAGACAACTGAGGATCAAT
TTGCTTTGGAGAAAAATGGCTACGCTCCGGGCAGTAAGCTGTACCCCAGTACAGTGGGCG
AAGAGGCCCAAGAACCTCTCAACAAGCCGGGTACAGAATTCGTATAGTGTCCGTGTCGGT
AGTAAATACGTTTCGATATTATTAAATGCGAAAAGAAAAAGAAGGACACGTGATACATAT
GAATAGTGTTAACCAGTTAACGGGACTAAGCTACTGTAGAGTACTTTAGGTGATGTTAGT
GCAGTGTTTAGTGTGACGCTTCGGAACAAAGTTCTTTTCGCAGTCATACGCGGACCCGAG
GAAGGATCTCATACGGTTTATTGGTTTGCTCTTCTGTAACGAATCGAGGGGAGGCTATTG
TCTAACATCGCGGTTTGGAGGCGATTTTTTCCTATTTACTCATTAGACTGTGAATAGAAT
AGATTTTTATTTATGCTTTAATAATGAAATTTTTCCATCACTATTTTTTTTTACGTGTAA
TACTTTATTTTTACAGTTTAAGATAAGGCAAACATTTTAAATGGCAGCAAATTTATATTT
CGAACAAAATCTGCTTTTTTTATTAGAAAAGCGTTTTGTAATTTTATTTTATTAAATAAA
AATTAATTGTACTGATATACAAATTTTCAATTATACAAATTAGGAAAACGAATGTCTCTC
CTGTAGATTTTTTAAGGTAAATTATAATTATTTATTGGGATATTAGGATATGTAGACTAA
TATTATGGTAATATAGTTTATGTGCCAATTCCAGAAAGACCATAAATTAATTTCTTAGAT
AAATTTATTATGAATCTAAATGTTTGTTGTCTCTTAATATTTATTTGTATAACAATTGTT
ATTTATAAAATATATAATAGGTAGTTGTTTTTGATTCACATATTTGTACTTAGCAAAGAG
CATTTTGTAATGTGAATTTGTCAAGCAGAATCCTGCCAAATCCCATGTATAAGTATATAA
AATTATAAATATATAATTACTCTTTACGTAACTAATGTAATTCAATTACATTATAATAAT
TCTCAATGCACATTTCATACAATATGCCTAGCTAAATAAGTGTGGTCACCAACAAACATT
TTGTAAATATTGTCAGTAAAATACATGTAAAAGGTGTTAAAAAAAAAAAAAAAAAAAAAA
AA
(4502 bp)

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