SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR20156c1_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		Lipophorin_receptor_2_[Operophtera_brumata]
Ontology
GO:0005509 F calcium ion binding
GO:0005764 C lysosome
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005905 C clathrin-coated pit
GO:0006629 P lipid metabolic process
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0006897 P endocytosis
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0009986 C cell surface
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034362 C low-density lipoprotein particle
Transcript
Level		FPKM:18.58 TPM:18.20
ORF EntryO_TrvaFAMAMG23843_complete:A_TrvaFAMAMG_TR20156c1_g1_i1
Sequence
(Nucleotide)
CTTAACTATTGCTAAAATAATAATGCTAATATAAAAAAAAAACAATAAAAAAAGAAACAA
AGTCCTAAAAGAGTGATAGATAGTTTAAGTACAAAAGACGAAAGATTTACTAAGGCATCT
CTTAAACAAAATACGAAATAGTCTAAAGCAAAAAGAGCAGGTAAAGTCGCGGCGGAAAGA
TAAATATAACACGTTGGCCGTCAGCCGGCCTGTGGCTGTAGTTAACCGGCTGATGAAGTG
AACGAAATCGTGGGGGAACGCTACGTCAGCGTAGTATCGAGCCACAAGTTATTCCGACGA
CCGTCTGTTTCATTCGGTTTCATAACTTGGATCGAGTATAACGTGTCGCGCGTTACAACA
TTTTTAGAAAACGATACCAACAAGCATTTATTTGCATCACATTCAAGTCATCAGTAAAAA
CAGTTTGTTTTATTTAAAATATCTGCAGATTTGCAAAACGAAGATGTCGGAGATAAGAGT
CCAAAGAGAATAGTAGATGATAACGAAAATCATTTAAGCAGGCATGCCAAACTGCTAAAT
TCAAAAGTGATCATACGGGTTTTGTGCGTGAATTATTAAGAGGAAAGCATTAGCCATATG
TGGAAAATATTGAGAGAAGGAAGTGCCCTTCTCCTCAAATTGGCACACGACGCTAGAAAA
GCAGATCTAGCTGAAACAGAAGAGACTGAATTAGAAACGGAAACAGTTCCTACTATACTA
TCTAAAATCGAGCCAATGCGGGTCTACTGGGACAATGATAAAAAAGATCTTAAGAACAAC
AATCAACCACTAATTGAACTTTATCTGGAGAGTATACCAGATAAAACTGAGAAGCCTGTT
AAAGAAACTCATTTCGAATATGAAAACATATTCACAGATCAATCGCCTCTGAAAGATTTA
ATATTTAATGGTGTTTCGGAAACACCGAAGGTTGGCACTGGAATCTCAAACAGCGGTCGC
GATGCTGGCATGGTCGCCGGTATTGTTGTTGCGGTGATATCTGGAGTTATACTATTGGCA
GCAGTGATCGCAGGTGTTATGTACAGACACTACGTGCATCATAACGTTACATCGATGAAC
TTCGACAACCCCGTTTACCGCAAGACAACTGAGGATCAATTTGCTTTGGAGAAAAATGGC
TACGCTCCGGGCAGTAAGCTGTACCCCAGTACAGTGGGCGAAGAGGCCCAAGAACCTCTC
AACAAGCCGGGTACAGAATTCGTATAGTGTCCGTGTCGGTAGTAAATACGTTTCGATATT
ATTAAATGCGAAAAGAAAAAGAAGGACACGTGATACATATGAATAGTGTTAACCAGTTAA
CGGGACTAAGCTACTGTAGAGTACTTTAGGTGATGTTAGTGCAGTGTTTAGTGTGACGCT
TCGGAACAAAGTTCTTTTCGCAGTCATACGCGGACCCGAGGAAGGATCTCATACGGTTTA
TTGGTTTGCTCTTCTGTAACGAATCGAGGGGAGGCTATTGTCTAACATCGCGGTTTGGAG
GCGATTTTTTCCTATTTACTCATTAGACTGTGAATAGAATAGATTTTTATTTATGCTTTA
ATAATGAAATTTTTCCATCACTATTTTTTTTTACGTGTAATACTTTATTTTTACAGTTTA
AGATAAGGCAAACATTTTAAATGGCAGCAAATTTATATTTCGAACAAAATCTGCTTTTTT
TATTAGAAAAGCGTTTTGTAATTTTATTTTATTAAATAAAAATTAATTGTACTGATATAC
AAATTTTCAATTATACAAATTAGGAAAACGAATGTCTCTCCTGTAGATTTTTTAAGGTAA
ATTATAATTATTTATTGGGATATTAGGATATGTAGACTAATATTATGGTAATATAGTTTA
TGTGCCAATTCCAGAAAGACCATAAATTAATTTCTTAGATAAATTTATTATGAATCTAAA
TGTTTGTTGTCTCTTAATATTTATTTGTATAACAATTGTTATTTATAAAATATATAATAG
GTAGTTGTTTTTGATTCACATATTTGTACTTAGCAAAGAGCATTTTGTAATGTGAATTTG
TCAAGCAGAATCCTGCCAAATCCCATGTATAAGTATATAAAATTATAAATATATAATTAC
TCTTTACGTAACTAATGTAATTCAATTACATTATAATAATTCTCAATGCACATTTCATAC
AATATGCCTAGCTAAATAAGTGTGGTCACCAACAAACATTTTGTAAATATTGTCAGTAAA
ATACATGTAAAAGGTGTTAAAAAAAAAAAAAAAAAAAAAAAA
(2262 bp)

- SilkBase 1999-2023 -