SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR20143c1_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		DNA_topoisomerase_2_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003916 F DNA topoisomerase activity
GO:0003918 F DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006259 P DNA metabolic process
GO:0006265 P DNA topological change
GO:0016853 F isomerase activity
GO:0046872 F metal ion binding
Transcript
Level		FPKM:5.93 TPM:5.81
ORF EntryO_TrvaFAMAMG23807_complete:A_TrvaFAMAMG_TR20143c1_g1_i1
Sequence
(Nucleotide)
CGTCTCGTTGTTTCGATGCGGGTTGTGTTTTTCGCTGAAATTCGTAAAAATGTTTCGCCG
AAGTTAATAAATTGAATTCATGTGTTGTTCTATTATCAAGAATAACAATCACATGCGTTG
ATCGCAAACGTTTTATAAAAACGTCCAACAAGATGGCTGATATAAAGTCAATGTTTAACA
AGATGAGCAGCCCCAAGCAGAACGGCACCGGGGAACCTGCCCCGGCGTCTAAAGGGCAGA
AGGGTACGATTGAGAAGATCTACCAGAAAAAATCACAGTTAGAACACATCCTGCTACGTC
CCGACACTTATATAGGGTCGGTGGAACGAGCAACGGAGACTATGTGGATATTTGACAAGG
CTAAGGAATGCATGGTGCAGAAGGAATTGACATTTGTACCTGGTTTGTACAAAATTTATG
ACGAAATCTTGGTTAATGCTGCTGACAATAAACAAAGGGACCCCAAAATGGACGTAATTA
AAATTGACATAAACCAAGAATCTAACACAATATCAGTTTATAACAATGGATGTGGTATCC
CCGTTGTTATGCACAAAGATGAGAAAATGTACGTACCAACCATGATCTTTGGTCATCTAC
TGACATCTTCCAACTACAATGACGAGGAAGAAAAAGTAACAGGTGGTAGAAATGGTTACG
GAGCTAAACTTTGTAATATATTCTCAACTAAATTCACAGTAGAAACTGCCTCTAAGCAGT
ACAAAAAACACTTTAAACAGACTTGGGGGTCCAACATGTCTAAAGCATCCGAACCAAAGA
TCAAAGAAGCCGGACGAGATGATGACTTCACCAAGATCACATTCAGTCCAGATTTAGCCA
AGTTTAAGATGGAGACTTTGGAAGATGACATTGTACAGTTGATGTCGCGACGTGCATACG
ACGTGGCCGCCTCCACGCAGGGCGTGAAGGTTTATTTGAACGGCGAAAGAATTAAAATTA
ATAAATTTAAGGACTATGTAGACTTGTACATAAAAGGTAAAGAGGACGAAAATGGACAAC
CATTGAAAGTTGTTTATGAGAAAGTGAGCGACCGCTGGGAGGTTGCACTCACTATATCTG
ACATGGGATTCCAACAAGTTTCTTTTGTCAACTCTATTGCCACCACTAAAGGTGGTAAAC
ACATTGACTCTGTCGCCGACGGTGTGGTCAAGAACGTTCTGGAAGTACTTAAGAAGAAAA
ACAAAGGCGGTGTCAATATAAAACCCTATCAAGTTAAGACACACATGTGGCTATTTGTCA
ACTGTTTGATCGTAAACCCGACCTTTGATTCGCAAACTAAAGAAAACATGACGCTCCAAG
CTAAAAGTTTTGGTTCGAAGTGTAACTTGTCCGAAAAATTCATTACGGCCGTAACTAAAT
GTGGTTTAGTCGAATCTGTGTTGACGTGGGCCAAGTTCAAGGCGCAAGATCAGTTGGTGA
AGGCGTCTGGTAAAAAACAAAGTAAACTGAAAGGTATACCTAAATTAGAGGATGCTAACG
ATGCAGGTACGAAGAACGCGCATCTCTGTACATTGATTCTCACTGAGGGAGACTCAGCCA
AGACTCTAGCTGTGTCAGGACTCAGTGTAGTCGGCAGAGACCATTATGGTGTGTTCCCGT
TGAAAGGAAAACCTCTAAACGTGCGTGACGCATCTCACAAACAAGTCTTAGAAAACGTAG
AGATCAACAATCTCATTAAAATCCTCGGTTTACAATACAAGAAGAAATACAACTCTGTTG
ACGATTTGAAAGCTTTACGTTACGGTAAAGTGATGATTATGGCCGATCAGGATCAAGACG
GTTCACACATCAAAGGCCTGATCATTAATTTCATTCATCACAATTGGCCTGAATTACTAA
AATTACCATTCCTAGAAGAATTTATTACCCCAATCGTCAAAGCCACTAAAAAGGACAAGG
AGATATCATTTTACTCGTTACCAGAATTTGAAGAATGGAAGAGAGAGACTGACAATCATC
ACACGTACAATATAAAGTACTACAAGGGTTTGGGTACCTCCACATCTAAGGAGGCTAAAG
AGTACTTTCAGAATATGGACCGACACAGGATACGTTTTAAATACGGCGGTCCCACCGATG
ACCACCATATTGAATTGGCCTTTTCTAAGAAAGGTGCAGATCAACGTAAGGAATGGCTGA
CCAATCACATGGACGAGGTGAAACGTAGGAAAGAGATAGGACTACCTGAAAGATACTTGT
ACACGAAAGAGACGAAAACAGTGACTTATTCTGATTTCGTGAATTTGGAGCTTGTGCTGT
TTTCGAACGGTGATAACGTTAGATCAATTCCATCAATGATAGATGGACTAAAGCCAGGTC
AACGTAAAGTGATCTTCACGTGTATAAAGCGTAATGACAAACGAGAAGTGAAAGTCGCGC
AACTGGCTGGCTCCGTTGCAGAACATTCAGCCTACCATCACGGTGAGCAATCCCTAGCGA
TGACCATAGTGAATCTCGCTCAGAACTACGTCGGATCTAACAACATCAACCTGCTGGAGC
CGCGCGGACAGTTCGGGACGAGGCTGTGCGGCGGGAAGGACTCGGCCAGTCCGAGATACA
TATTCACCCTTATGTCGCCGCTGACGAGGCTCATATTCCATCCGCATGATGATCCTTTGC
TAGTGCATGAGTTTGAAGACAATCAGAAGATAGAACCGATATACTACCTGCCCATCATTC
CGATGGTGCTGGTCAACGGTGCTGAAGGTATAGGAACTGGCTGGTCCACTAAAATACCTA
ACTATAACCCAAGGGATATTGCGGAAAATCTCAGACGTATGCTCGACGGCGATGAGCCTA
AAATGATGCATCCGTGGTACAAGAACTTCAGAGGGACCGTGGAAGGATTCGGTGACAAAT
ACGTCATATCCGGCGAGGCGGCCATCTTGCCCGGCGACAAGATCGAGATCACGGAACTTC
CGGTCGGAACCTGGACACAGAATTATAAGGAGAACGTTCTCGAACCGATGCTTGGAACTG
ATAAAGTGAAACCATTGATTTCTGAATACAGGGAGTACAACACAGATACAACAGTTCGTT
TCGTGGTGTCGTTGTTACCTGGTAAACTAGCCGAGGTAGAAGCGGAAGGCATACACAAAG
TGTTCAAACTACAAACAACTATATCCATGACTTGTATGAACGCTTTCGATCACAACTGCT
GTCTTAACAAATATGAAAAAGTAGAAGAAATCCTACGCGAGTTTTACTCTTTACGTGTAA
AGTACTACGCTCGACGTAAAGATTATCTCGAGGGACAATTGCAAGCAGAAGCCGATAAAC
TATCCAACCAAGCTCGGTTCATCTTAGAGAAGTGCGATAAAGGACTCGTGGTGGAAAACA
AGAAACGGAAGGCTATGGTCGAAGAGCTTATTAAACGAGGTTATGCCCCGGATCCCATTG
CTGATTGGAAGAAGCGTGCCAGCAAGATACAGGGACTCACTGCTTTGGAAGAAGATGAGA
ATCAGGAGTCGGAGGATGAGGAACCAGAACCTGAGGCCAAGGGGAAACCCGTTGACCCAG
AGAAAGCATTCCAACAACTAAAAGAAGTGAAAAAGTTTAACTATCTACTGGGGATGTCCA
TGTGGATGTTGACCAAGGAGAAGAAGGACGAACTCCTCAAACAGAGAGACCAAAAACTCA
GTGAACTAGCCACATTGAAAAACAAAACCCCTTCAATGCTGTGGCGTGAAGATCTAGACG
CTTTCCTCATCAAACTGGACGAGGTTGAAGATAAGGAGAGACAAGAGGAAATGACCGTCA
ACAAGAAAACATCTAAAGCTATGATGGATAGAATGAAAAATCACAAGGCAAACAAAAAGA
ACCGCAAGTCGATATTCGATATAATTCCATCTGAGAACGGTCGCAGAGTCGAACCCAAGA
TATCTGAAGATTTAATCAAGAGGATACAGGCTGCGGAAAAAGCCAAAACAAGGAAGGAAA
TCAAGAAAGAATATGATCCGGATGACCCGACTGGCATCAGTCCTTCAAGCGGTGAAAAGA
AACCTAAAGGCAGAGTCAAGAAGGAAAAACCAGAAAAAGCTGAAAAACCAGAGAAACCAG
AAAAAGCGGACGGACTCAAACAAATGAAACTTACATTTAAGAAGGAACCTAAGAAGAAAA
AGATGACATTCAGCGGCAGCAGTTCCGGCGAGATGTCCGGTTCGGAACCGGAAGCGGATG
TGCCCGCCGCGCCCCGGGAACGAACCAACGCCAGGAGAGCCGCCACCAAGGTCCAAAAAT
ACAAGGACGGTTCAGACGATTCTGGTTCTGATTCTGAGCCCGAACTACTCGACAACAAGA
TCGAGTCAGATCACGAGGCTCCTCAGACCCTGGACTCCAGCGATGATGATTTCAACGTCA
AGAAGAACCCTGGGAAGAAACCTGCTGAAATGGTTTCTGATTGTCTGTTCGACTCGCTCA
TAGAAGACTCCAAGAAGGACGAACCAAAATCGAAACCGAAACCAGAAACCAACTCGCAAC
CAACCAACTTGATATCGAGTGACAGCGATGCTCCCGTTGAAACCTCGCCGCCGAAGAAAA
AGGCAGCTCCAAAGAGGAAACTCATGAATGTAGATAAAGATGAGAAGAAGAACAAGAAGC
GACCCGCCAAGGCCATGCTCAGCCAGGACAGTGATGATGATGACAGCATATTTGACAGCA
AAAAGGGCAAAAAGAAACCTGCAGCGAATCCTAAAAAGAAAGCCAAGAAGAAGTTGGACA
GTGACTCGGAGTCTGATATCAATATCAGCGATGGCTCCCTCAGTGATTAGATTAATTACA
TATAATAATTGAAGCAGTATTCGAAAGGACGTGGATATAACTTTATTTGTAAATGTATTA
TATAATTTAATGTGTAAGTATTCAATAATGGCAGGTCCCATATCTCAGTTAAACTGCAAA
ACTGAACAAAATTAAACGAAATAGAACATAATCCCAACATTTAGATTAAAAGGAAGATAT
AATTTTATTAATACTTTATAACTGTAGCTATTATTTTACTAAATCATATGTAAGTTTGGC
ACACACTAGAGCCGCACCCAATTGCATTTTCATCAAATCATTTTACTTTCATGCATTTTC
ATCGGGTACTTACCATGATATTTATTTAATTGAGTTCTCTCGATATTTCAAAGTTGTTGC
AACCACTGGAACTCCAACTCACATCACGACACACCACTGTACGACCACCAAAAGCGAATG
AGTGCGAGGG
(5230 bp)

- SilkBase 1999-2023 -