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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR20139c1_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_unconventional_myosin-XVIIIa,_partial_[Bombyx_mori]
Ontology
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005793 C endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005856 C cytoskeleton
GO:0006259 P DNA metabolic process
GO:0007030 P Golgi organization
GO:0016020 C membrane
GO:0016459 C myosin complex
GO:0016477 P cell migration
GO:0016887 F ATP hydrolysis activity
GO:0031032 P actomyosin structure organization
GO:0042641 C actomyosin
GO:0043066 P negative regulation of apoptotic process
GO:0043531 F ADP binding
GO:0044822 F RNA binding
GO:0048194 P Golgi vesicle budding
GO:0050714 P positive regulation of protein secretion
GO:0051015 F actin filament binding
GO:0090161 P Golgi ribbon formation
GO:0090164 P asymmetric Golgi ribbon formation
Transcript
Level		FPKM:5.50 TPM:5.39
ORF EntryO_TrvaFAMAMG23797_3prime_partial:A_TrvaFAMAMG_TR20139c1_g2_i1
Sequence
(Nucleotide)
GACGACGCCGCCTCTGAACATGATCTGAGTAAGTCCCAGTCTGTAGCTGGTGACGTCCAG
GTCGAGCGCGAGCAACATGTCATCGACGACTTGTCGATCCGAGAGGTTCTGTTGTTTCGA
TTCCGAATCGTCGCTTTCCGATATCGCTAGGAGACGGTACCTTCTAGCAAATTCAGACAA
TGGCATGTGTTCGGGGAAACCTTGCTTGTACAATCTTGAAGCATCTAACAGTTGGAAACC
GCGGAACTGTGACCGTAGCAGCGGTATGTTGACGTCATCAGCGGAGTCTCCTTGTCTATG
CGCGAGTAGACAGCACACAAATGAAATGCCTGAAGTTCCGCATCTTCGTAGCGTGTCCAC
TACACCGTCCGCTACGAACTTAGCTTGGAGAGCCGTTGAACGACGCTTCATGCCTGCTGT
ACCAGAAGTTAGCGTCCTTCGTATAGAGGAGGCTCTCCTCAGCGTAGTGGCGTCTCCCAC
GGCCGCCGACCACGCGCTCACGCCGCAAGCACCGCGCGCCCACGACGACAGGCGGGACAC
CTCCTCATTCTGGCTCTCCTGTAGTAGTGTGAGTGACTTCTTCATGACAGGATTCTCGCG
ACTCGCTTTCACCCACCCAGTGACGTCATACAATACTGGGTTCGTGCCCTGTAAATGTTG
GAGTATAAACTGTCTGGCGTGCGGCGCCTTCTTGATGAGGTACTGCATCTGATTGGGAGC
GCCGTAGTGCGACATCACTCGCTCCAGGAACGTGTCGTCCGACGAGCCGGGGTACATCGA
CTCCTCGTCTAACAACCATAACAAGCCTCGTCGATCGCATTCTCTAAGATCAGCTTGTGA
GCTCCGCACTATTGTGTTTTGTGGTGCTTTATCCAGGAGTTCCACCATAGGACCCGGGTT
TACAGCTTCCGATAACCAATCTTCTTCAGTTCCATCGTCGAGTGTGATCCCTTCCTGCGC
GTATCGGTCTCTCGGAGCTACCAACATCGCCTCGTGGAACACTGCTTGAAGACGCTCTTG
CAGATAATTAGATAATAGTTTAGAGAGTCCGGCCCCACTTTGTTGTCCGGCGCACATCGG
GTTGTCAGCTCCGGGCGAGTCCAGTAATAGTATCGACGCAGAGGTTCGCGCTGACGTTGA
TAGACTCCTGTTAACAAGAGCAGCTATAATATTGAAGGTTTCATTGTAAAGTCCGCTCAC
GAACCCGTCTAAAGCCTCAGTCGCCGACAACTCTTTCTCGTTTGACGGTGAAGGCGTTCT
TAAATTAGTGTTAGACTGTGGTGAACTAGGTACAGTAGCGAAGACAGAACGCATTAGTTC
TTCCGGAGTGACTCCTAGTAATTTGGCAGCTCGCTGTCCGCACCCGGTGCTTGCGAATTG
AAATTTAACAGCTGATCCTGAATTTGCTTTAACAGCCCCAGCCCATCCCAAATGGCATAT
AGCAGCCATGATCTTCCATATAGCCATCTGCTCTGCCTCTGTAACACCGAGCTTCTGCAG
GCATTCTTTCAGGGCGGCAAACTCGGTAGGAGCATCTGCCTTCTCTTGGGAGCTCAGGAA
GGGGTTCGGAGCTGTGAGAGGAGCTTGCTCGAAGAGAAGCTCACGGCGGAGACGACCGTC
ACAACCGTGGAAGAGAGTATGAAGAGCTCGTAGAGTTGTCTGTCCAGGTTTGAAGTCCGG
CAACAATGTTTGCACCGAAGCAGAGACTAAGCAACCGCCGCCATCGAAATCCAAGGACGA
TAGAGAAACAAAACGAGATGCGTGTGGATTTGATCCCGTTCGACTAGATCCAAACATGTG
TAGGACATCGAAAGCCGCGTCCAATCTTTCAGGGGTCAGTTTAGATCCTTGCGCCGGGTA
TGCACTCGCCAAGTACCACACACAATGACGCATAGCAGACGTCTTGCCTGAACCGGACCT
GCCAAGAAAGACGATGGCTCTATCCCTTCTGGAAGCCAGCATACACCGATGAGCTGACTG
AGCAGCAGCAAACACGTGGGGAGGCATATCATCCGCACGACAACCGCGGAACATTGCTGC
TACCTTCTCCGTGTATATAGGGGCTGTTCGTTTCGGTGGACCCATCACCAGGAGCGCGTG
ACCGGCGCGGGCGTGCGTCAGACCGGCAGCGTATCGAGACCTCAGCACGTTCAGAGCACC
GCATTCGTTGAGGCAACGGAGAGAAGCGATGTCTTCACAGCGTTCTAGCTGCGCTGGGTT
CGCCTTTTCCAAGTCATCTTCGTCGACAGTGAGCACCTCTCCAGTCTGTAAGACCCGCAC
TTTCGTTCGTCCTGCTTCGGCGTCACCCTCTCTCACCACAGCAGTGAAGCCACCTCGATG
GGCGAGCCACATGTGACCTGCTTGGAGCCATTCCTTCTCACATGCCAGCTGTTCTTCGGA
TTTGGCCTGTGTGGACGTGAATCGTCGACTTCCCGACCGACTGAGGGTTCCTCCTCGCAC
GTTGCTGTCACTGAGATCGACATCACCGCCACCATCCGCTGCACGTCTGCGCGACAGCTC
ACACAACTCTGCTATCGGTTGCACCTTAATAGTAACGTACTCTTGACTTCCTTTGATAAG
ATCAATAACTTCTTCCCTACTTTTTTCTTCAACGTTAGTACCGTTCACTTCAAGCAATCT
ATCGCCAGGAAGTAGACCTGTCTCACTAGCACCAGGGTAGGAACCAGGTTCAGCTAGAAT
CACGGCTTTGAATATCAATTTACTGATCAAATTGTTAGACCCACTACACTTATTATCACC
ATTAGTAAGTAACCCGTTTTCATGTCCATTCAAATCGCCCATAAAAATCCTGTCCTGAAC
CATCGCTCTTCGTAAACTAAAGCCAAAATCATTTCTCGGCGCCTTCTGCCTTTGAATCGT
TAGTATTCTCGGTTTTGGTAATTTCACTGGCATTATAGCCGGTAACGGTAGGTAAGTATC
GTCAAAGTTACTGGTACGGGACCATCTATGGAAGCCTTGCGATTCGCCGACAGGTGAGGT
AGAAAACGGTGGTGTAGCAAACGAAGAATTAGTTGTCGTGTCGGTTAAGGAATCAGCGCT
CGGTGAAGTGGAAGTCACTCCCATGTAGCTGGTTCCATTCGTCTTTGGTACCATATCGAC
ATCTTGAGTGGTAATTGTCGGATTAGAATTCTTATAATTTTTATTTTGCATTTCCACGGG
ACTGTGAATAACTTTCTTCGTAAAATTTTGTACGTGTTGTAAGTCGTCGCTGGAAGACGT
GCTCTTCGAAGCTGGAATGTTATAAGTCACGATCTCATTATTCTGAGTATTCCGGGACAA
TAAATTAGGATCTTGTCCATTAATCACGTGGTCCACTGCATCTACATTTTGAACGTTACT
CTCTTGGGAATTAGAACTAGTATTGCTTAAACGAGGACCTTTCAGAATACCTCGTTTGGG
AGGTCGTGGTGGAATGGGAGGTAGATTAGGCGGTTGTCTTGGACTCGTATTGTTTACGTT
GTTCGGATTATTCAACGAGTTCAAAGATGTTTCTGAGCTGTCAGACTGCAGAATATTTTC
TTTTTTGCCCCAAGTATGTGTCGTGGGGAAACTCGGCGACAAATGGTTGGTCTCATCGCT
TAGATTAGAATTGGATCCTGACGTGGAAATCAATGGGTAGTTTGAATAATTCGAGTCATG
TTCCAAGTGGGCGAACAACGAGGCGGTGTAGTCGGCGGTGATACCAGAAGGCAGCTTTTC
CTTTTCCTTGCGTTTTCCCCGTAGTTTAAGCGAACGTCGAACCTCATCCAGCCTCAGTGG
CTCCTCGAGTCCAGCTGCGATCCTCTCCCTTTTCTCTCGTTCTTTTCTTTCTTTTTTCTC
TTTTTTCCGTCGTTCTTTTTCGCCGTCTCGATCGTCGTAGCCACCATTGTCACCCCCAGC
CAGTACGGTGGACTTTTTCATAAAGTTGAACATAGCTGGGTGATCTGCGGTGCCGTAATC
CGAACTGTATCTGGTCAATCCTTCACAAACACTTATACACAAACATCACAAATTCTTTTT
TATATCGAACACTTCAATGGTCCCTCACAATTTACGGCATTAGAAATATAACTATACAAC
CAACTTCACAGCATCCATCGAAAATAAGAACACAAAATCACCGCATTTAGATAAATACTG
ACAAGAGTCAGAAATGCTGTTCGTTGTCGAAATATCGATGTTTTTTCGGAACTATCGCAC
AAGAATTTGTAAATCCAGCCCAATGATGGACTCGCCG
(4237 bp)

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