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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR20139c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_unconventional_myosin-XVIIIa_isoform_X2_[Amyelois_transitella]
Ontology
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005793 C endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005856 C cytoskeleton
GO:0006259 P DNA metabolic process
GO:0007030 P Golgi organization
GO:0016020 C membrane
GO:0016459 C myosin complex
GO:0016477 P cell migration
GO:0016887 F ATP hydrolysis activity
GO:0031032 P actomyosin structure organization
GO:0042641 C actomyosin
GO:0043066 P negative regulation of apoptotic process
GO:0043531 F ADP binding
GO:0044822 F RNA binding
GO:0048194 P Golgi vesicle budding
GO:0050714 P positive regulation of protein secretion
GO:0051015 F actin filament binding
GO:0090161 P Golgi ribbon formation
GO:0090164 P asymmetric Golgi ribbon formation
Transcript
Level		FPKM:23.40 TPM:22.93
ORF EntryO_TrvaFAMAMG23792_complete:A_TrvaFAMAMG_TR20139c0_g1_i1
Sequence
(Nucleotide)
TTTGAATCGCACGCGCATCGCTCGCGGACTTTCGCTATCGAACGCTCTATATTCGAACGA
CGCGAACGCAATACATTTGCGATTTGACCTATTTCGTAAAAACTTCTAGGATTATCTTTT
TCTTGTTTCAAGGGAACAGTTCCCTTTCTGCTGTCAACATCTTTGTCTTTAATGATAGTT
AGATTTATGAACTTAAAAGACAAACTGTAATAAACATAAATTTTAACTTACAATTATTCA
TTTAATTAAGCCTTTAACGATCTTAAACAAGGACAGAAGTATAGTTAATTAGTGTTGTGC
ACGTAAACAAAGTGACAAGTCATTGAACTTAGTGATAAAGTCAGTGAGCGTCAGTGAGCA
TTAGTGATCCGATAATATGTTCGTGATCCTCGCTTTCATCGGTGTAAGATTTGCTTTGAA
TGTGTCGAGGCAGAGTTCCAGGGCACTCGCAGATGAGTGCTACACTAGGAAGTGCACGAC
CGCCGCCGTGGAGCTCTCGGTCCCCGAATGGGCCCACTACCTCGCCGCCGTACTCTTCTT
ACTGTGGCTCGTGTTCGGCAGGCGGAGAAGCAGCTACGGATCCTCGTCGACTTCAACATG
AGTTTAATATCATGTTCAGAGGCGGCGTCGTCGGCGGCTTGGATGCTCGTCGCGACGCCG
CGCTCGCCCGCGTCCTGGTCAGGCTCCAGGCTCGAGGACGAGGGTTACTGGCTCGTAGAA
AGGCACAGCGACTCAGGACTCAGCACACGGCAGCACGGTGTATCCAGCGGAATGTGCGGG
CGTTTGTCGCGGTCAGAGATTGGCCCTGGTGGAGGCTGCTGGTTAGAGTCACCCCGTTAC
TTGCGGTGCACAGGACTGAGCATCGACTTAAGCAAGCGCAGGATGAGTTGGAGACGTTGC
GAGCTAAATTGGATAAGATTGAAAACGAAAGGACACACTTCAAGAATGAAAATGAGAGAC
TTGAGACAAAGCTATCGGAAGTGGGCGGTGAGTTAGCAGAAGAAAGGGCAGCTGCCGGTC
ATGCAACGGAACGAGCAGACGCTGAGGCTGCGGAGAGACTTCGAGTTGAAAAGGAGAACA
GAGATCTGCTCTCTAACAATCAGAGATTACAACAGGCATCAGAACGTCTAGAACTGGAGC
TCCTTCACTGGCGTTCAGCCGACAGTGGAACAGCGGAACACTCCGACTCTGAAGGTTCCG
AAGCCGACTCCACGTCCGCCAGCGACAAGTACAAGCGCCGGTATGAACGAGCCCACAGAG
AGCTACAGCTATTAAGAGCTCAGCTCAGGAGACAACACGAAGACGACTTGGAACAACTCG
TCACGGTCAAGAAGCAATTGGAGAAAAAGGTCCAAGATGCTTACGAAGAGGTTGAGGAGC
AGCGAGCTGTTGCCGCGCAATGGAAACGTAAACTGCAGAAACTCACCAACGACATGGCCG
ACTTGAGATCACTCCTCGACGAACAGACGTGTCGTAACAATCTCTTGGAGAAACGTCAGC
GTAAGTTCGACGGCGAGCTGCAGGCGGCGCAGGAGGAGCTCAAGAGAGAACGGTCGGCCA
AGGAGCGGCTCTCTCGCGAGAGAGATCTGGCGCAGGCAGAGAAATACGCCATGGAACAGT
CCCTTTCTGAAGCTCGTATGGAGTTGGAGCTGAAAGAAGAGCGGCTGTCGGCGGCGGCGC
GGGAGTTAGAGGAGCGGGGAGGAGGCGGAGACGAGCTCGTGGCGCTGCGCAGGACCAGGA
CCGAGCTGGAGCGCAGGCTGCGGGACCACGAGGAGGAACTGGACGACCTCGCTGGACAGA
TACAGTTACTGGAAAGTTCTAAGCTTCGTTTGGAAATGTTGCTGGAACAACAACGCAAGG
AAGCGCGCCTCGAGGCCGCCGCTCGGGATGACGAGATGGAGGAAACGAGAGCCAATGCCG
CCAAGAAACTTAAGATCCTGGAGAGTCAGCTGGAGAGCGAGCACGGGGAGCGCAGCCTGC
TGCTCCGCGAGCGACACGAGCTGGAGCGGCGGCTCGCGGCGCTGGAGGAGACGGCGCGCG
CCGAGAACCACGACCAGGCGCAGCTCGTGCAGAGACTTAAACGTGATTTGAAGAGATACC
GTGCTCTGTTACGTGATGCACAAACAATGCTCGAACAGAAAGAGAAAGAGGGAGGCGCTA
AAACACAGATTCGGCAGTTGAAGAATCAAGTAGAAGACTTAGAGCTGGCAGTCCGCGCGG
CCATGAAGGCTCGTCAGTCAGCGGAAGCAGAAGCGGCCGAGGCGACCGCCGCGCTGGAGG
AGGCCACGCGCGCCCGCACCGACGCCGCGGAGCGAGCGCACACCGCCGCGCGCGATGCCG
CCGCCGTGCGCGCGCAGCTCGAGGACACCGAGGAGGAGGCCGCTGAGCTACTAAAGAAGT
ACCGAGCGAGCACCAGCGCCCTCTGCGCGGCGCAGGCCGAGGCCCGAGAGGCGGAGACCC
GCGCCGCCGCCGCCACGGAGGAGGCGCGCGCAGCCCGGGAACAACTCGCCGAGCTCTCCG
CACGACTCGCGCAGGCCGAGGCCGGGCACGCGCACTCGCACCACGAGGCCGAGCGCAGGC
TGCATCTCAGGAACAAGGAATTAGAGTCTAGTTTGGAGCTAGAAGCGACGGCCCGCGGCC
GACTGGAAGGCCAGCTGTCTCGACTCCGCGAGGCGCACGAGCAGCTGTCTGCAGAGCTCG
GCGCCGCCAAGCAGAGGGAGCAACAGAGCGTCGACGAACTACGGAAGATCACTAGGCAGT
TGCGCGACCTGAAAGAAGAGAACGCATCCCTGACCGCCAAGCTGAGCGAGTGTGCGCGCG
CTCGTGCCTCGGCCGAGGCGGCCGCGAGTGCTGCGGCTGCGGATGCGGCTGCCGCGCGGG
ATGACGCCCGTCTCGCCGCGCGCCGAGCTCAGGCGCTGCAGGAAGCCATCGCGGGAGACC
TGTCTAGTCCTGCTGACTCTAAGGATTCTGATAGTGAAAACGACAGTTACAGTTCAGACG
AATCAATCGGAACTTTCTTGGCCAATCACAAGCTGAGTCCCTCGGCGCCGTCACGTAACA
GTATTCAACTCGAATCACAGAGATCACAAACGTCCGAGGGTCGCCAGAGTCGGTCCAGCG
TTGGTTCCGGCTCGAAGCCGCTCAGCCCGACGAAGGAGTCGTACGCATAACAGCCGGCCG
CCGCCGCCGGGCTGCTCACGAGCGCACTGCCCGTCATCTGCGCCGTGTTCTGTTCGCGGC
AGCGGCACGACTCCGCACACGCCATCCTAGAATAAAAAAAAACAAACGTCACTTTGACAG
CTGACAGCCTCTGTCAAACGTCAACGACAACTCTCGTCGAACTCGCGAGAGCACAGATAA
CACGAACTTTATAGTGTTGTGACTAGTACACCAAACACAAACCTTGTACCTGTATGTGAA
ATATTACTCTGCTTTGATTATTATAATGTAATTGATAAGTTGACTGCGAACGATTGATAT
AACGATTTACCGATATTTTATGCCGATGCAATATTTGACTGGTTTAAAAGTTACTAATTA
ACAATAATTACAATGGAATTAATATTGAAACAATACCTCCTATTAGACTGTTCTGTATAC
AATGAAACAATTTACCCCAATTTTATGAAATATACTGCTTTTGATATGAATTTAGCGTTT
GCAAGCTTTTGATATTGATATTATGATTATTCGATTTTACGCAGATGGCGCTAGGGTCGA
TCAAATTTCGAATAACACAATACAATGCATTCCAAAATGTCTTTAAAGTAAATTGCCTTG
AAACTTTGATATTTGGAGCTCTATAGCGCCACTGCTACTAAAAACGAAGTTTTAATTTAT
TTAGTGTAGATTTTCTTAGGAGTCATGTGTATTAGGAATTGCGCGGCGTACAGGCCAGCC
AGTCAGTATTTAGGCCTAAGGGCAATAAAACTCAGTTCACATGTCCTAATTCTAACAATG
AAGCCACATCACAATACTAGTAGAAAAATGTTGCCAGACTAGTACATGTGCACTGAGTTT
ATAACTTACAAATATAATATGTTTAAGTTCTTTGTTATTTAGTTAGCTAACTTTTGTAAA
TAACTAGATGACTATTCAACTTTTTTTATTTAATTTGTAATATTCGTGTGATCAGACTGT
TATTATATGGTTTATTTGTTATAGTTGTTGCTTTATCTCGTAGACATTGAACATATCTGT
TAGGTACACATTTTAATAGATAATTATTTCTTTAATTCAATATTAATATAAATTATCTTA
ATCTCGATGTTATTGAACAAAGAGAAATTGACATCTAAATACTTTTTTTTTCAATTTTGT
GCAATAACATTCAGATGTATCTCTTTATATTATGTAGTGAATTTAGAAATCATATTTA
(4378 bp)

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