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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR20124c0_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_gem-associated_protein_5-like_[Bombyx_mori]
Ontology
GO:0000387 P spliceosomal snRNP assembly
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0016604 C nuclear body
GO:0017069 F snRNA binding
GO:0032797 C SMN complex
GO:0034719 C SMN-Sm protein complex
GO:0044822 F RNA binding
Transcript
Level		FPKM:3.56 TPM:3.49
ORF EntryO_TrvaFAMAMG23739_5prime_partial:A_TrvaFAMAMG_TR20124c0_g2_i1
Sequence
(Nucleotide)
TCTGAACGAATTTTGTACTTTATTTAATGTTGACATAAAAAAGTATAGTAAATTCATGTC
TAGATTTTTTAATCATTTTTCCTAGACAACACAACGAGACAACGGGAAACAAAGATCGTC
CATTTAAGGGTTAAACAAACAACTAAATTGCGCTATTGACTAAGATAACAAAACGCAATG
ACTTCACATCAAAAAGTAAAACCATTGTTACTTTTAAAAATTAAAACTAAAATTACAGAT
CACAACAGTCACCAACCCTGCTTATTCTTCACCATTTTCAGTCTCAACATTATCCGAACC
ATTCACCAAAGACTTTTCTTTCATTAACAACTCGATTCTTGTAGGAAGTTCTTTCAAGAC
CTCCTCAGTTTCTTCGGCAGTAGGTTTGGGTGCATCTTGCGCTTTTTTTCTCCATGTGGT
CCGCTAAAGTGATTTGTCCCGACGCTTTGGCGATTTCAGCGGCTAAATTGAGATTCTCCT
GTTTTTTTGATTTACCGAGTACGGTAGCTGCTGTCGATAAATCGCCTAATGCGATGAAAC
AAATAGTAGCTACTTCTAGGCTTCCTATTTGTATGGCATGATTTGCCCATTTATGTAGAA
CTTGAGTTGCAATACTATCCATGTACCTTATACGACAAAGAACGTAAGCTTCTTTAAACA
ATTTATTTTCTGTGAGATGCGTCACAGCGCCTTTGACGTCATGAACACTGAGTAGAGTCA
AAGTTTTTCTGTATACGGGCCCGCCGTAAACTTTACTTTCATTTAGTTTTTGATCTTCAC
CCTTTGCAACAAGACGATCGATTTGTGTCAAGTACAATTGAGTAGCATCTTTCCAATATT
TGAAGGAAACACAAGGTGTGAGACTAAGTAGGTAAGGACAGAGCAAGTCGTGTTGACTCG
CGTATTGGATCGTAGCGTCGACGAAACCGCGGAATATCGATAGAACCATCCATGCTTCGT
GACTAAACGCTTCTAGGTGACGACTTAATTCTTTATCTAAAATCTCGTTGACTTCTTGTA
TTGTTCCAAACATCTTAATCAAATCCACATCACAGTCCTCACTCTTCTCAATGTTCACTT
CAACAAAATCATTATCTACGTCTTCACATTTGATACCATCCGGAACATTCTCCGCAGATT
TACCAGAGTTTTTCATGTGTGTTTCAAACATTTTCCTCACCATTTCGTTGTTACAACCTA
TAATTTGTTTGCATAATGTGGGTAGTAGGAATCTTTTAGATGATTTAGTTTGGTCCGTTG
TGTTGACAGCTTTTAGTGTTGCAGTTTCCGTGGTAGTAACATCTTCCTTGTTGATTTCCT
TCTTGTCTTTCTTTTTCTTATCTCTTTTTAGCATTTCGTATTTGTGTTCATTATAAGCAT
CAGCAGGGAAATCCTTAACGTCCCACACTCGAACGGCCATGTCGGCTCCACCGGACATCA
CTTTGTCCGCTAACTGTGGGAAGGCGCTCCAACTCACGCACAGAGACATCTGCTCCATGT
GACCGTCGAATATAGACACGCACACAGACGCGTTCACATCCCATACCCGAACTGTAGAAT
CTAATGAGGTAGATAACAGGGAACCGTCCTTGTGAGGATTCCAAGATACTTCAAACACAG
TTGATTTATGACCTTTCAGTGTCTTCCATGTTATTAATTGTTGAATACCATCTTTTTCAA
CATATTCAAGTATCACAATAGTGTTTTGACTATCTAAAGAACATACAGCAATCATATTCT
TTAACGGAGATTCTTCACTTGATTCCGATGTTTGTTGGGGGTGCCAATCCATATGGTGTA
TCATTTTGCTGAATGCAAACGTAGCCGCAAAGATTGTATGTGGCAATTCTTGTGTGAGCA
CTGCGACTCCGCCAGAGTTACTTCCCACAAGGAAACCACGCGAGCACCAATTTACAGAGC
TAACTTCCCAATTGTGACCTTCAAATTCTACACGTACA
(1958 bp)

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