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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR20120c1_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_protein_shuttle_craft_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007399 P nervous system development
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
Transcript
Level		FPKM:5.71 TPM:5.59
ORF EntryO_TrvaFAMAMG23729_complete:A_TrvaFAMAMG_TR20120c1_g1_i1
Sequence
(Nucleotide)
TTTCCAACTTCATCGTTTCACTATTTTGTCATTAAGCGAAATTACCGCAAATTGTGCAAA
TTAATTTTTGTTTTTATTTGTTTAATATTTTTTGTGCAATTAAATCTTTACCAGAGTATA
AAACCATCTTTAACAGTCAGGGGTTTAAAAGTAGGGTAGTTTTTTGCCTCGGGCTTCGGC
CTGCAGGCTCCGTCCTGTTTCCAAACTAACATACAATAGTCTGGAAAGCTTCAATCCATT
AACAGTCATCTCCACTTTCACCATAATTTCACAACCTGATTCCATCAACTTCTGAAAACA
TGTCGCAGTGGAACAACTCTTATGCCTACAACGGTCAATACCAAGCATCTAACGGCTGGA
ACGGCGATGCTAATGCTCAGTACGGAAACCCACAATACTTCGCGAACGGGCAGGATACCG
CCAACCAGTATGTGAGCTTCAATGAATTCTTAACACAAATACAGGGTAGGACTCCAGCTC
AGGGTAATTCATCTCAATACAATAATGTTAGGTATGAAAACTATCCAAACACCCAATACA
ATTATCAAAATATGCCATCTACATCACATAGAACTGTAGATAGCTATAATTATCAAAATA
ATAGTAACCCAAGGAATCCAGAGATGTACCAAATGAATGTGCAAAATCAATACCATGGGC
CCCCTGAAACTTTTCAAAATGATATTATACTGAAATCTAACCTTACTCCTACTGCAATGG
AGTTTGTTCCTAAAAGTATGGTTCAAGCAAGCTCTAGCTGTCAAAACTTAGCAGAACCTG
TGAATAATCATAGCTCTAATGAAACAAACTGGAGAGAAAGACAGCAGAGTTCTCATCAAA
ATGGTGATGTGACAAACCATCAGGTTACTGAGTCTAGAAGCCAAACAAACAAGCCCCAAA
CTAAGGCACATAACAACCATGAATCTGTTAAAAATGGTTATGAAGGTACTAGACATCGTA
ATAATGATCAAAGAAACAATGAAAGAAGTAATGAATCAAGTAACAGTAGTTATTATCAAA
ATCACAACGAAACCAAGGAATCTAAGTCTCGTCACGAAATGAACAACCGTGAAACAGCAA
ACAACGGTTATGACAGTGCTAGACACCGTAACAATGACCATCGGAATAATGAAAGAAATA
ATGAACCCAGTACCACTAATAACCATCAAAACCAATATGAAAATAAGTCTCGGTATGAAA
TGAACAACCGTAATGAATCAAGCAGCCGTTATGAATCTAGGAACTACAACCGCAATGAAA
AAAAAGGTCCTCCACAATCTAACCCTAAATCAAAAAGAGATCCTGATGCTCGTACTTTCT
ACAACAGTTCTGTTGCTAAAGATAGTCAAGATGTCAGGAATGGAAGAGGTGAAAGTTCCG
GAAGACAGAGGAATTGGGCTGGTAGTCAACGAGTCAAACCCTCAGAGAGGATTACTGCTG
AGGATGAATATTATGCTAACACATACACTCAGCAGAGACAAGAAAGAATGGAACGAAAGG
CTGAAACTTCAAGCCCAAGTAGATTTAGAAACAAGAATGTTGAACAACCAGCAGTCCTGA
ATAAAGAAATGACACAAAGAGAGCGTCTGACTGAACAACTTGAAAAAGGAACATTAGAAT
GTCTGGTTTGTTGCGAGAGAGTGAAACAAACAGAGTCTGTCTGGTCGTGCGGGAACTGCT
ATCATGTACTCCATCTTAGGTGCATCAGGAAATGGGCTATGAGCAGTTTGGTCGATGGTA
AATGGCGCTGCCCAGCTTGTCAGAACTCGAACGAAACAATACCGACAGAGTGTCGTTGTA
TGTGCGGTGCGATGCGCTCCCCGGAGTACCACCGCGGGCAGTATGTGGCTCACACGTGCG
GCAAGCTGTGTCGCCGGCAGCGGGCCTGTCCGCATCCGTGCACTCTTCTGTGTCATCCGG
GACCGTGCCCGCCATGCCAGGCTACCGTTACTAAGCAATGCGGGTGCGGTGCTGAAACTC
GTTCAGTGATGTGTAGCAGTAAACTACCACAAGTCTGCGGGAAGATCTGTCAGCGCATGT
TACAATGCGGAGTTCACACATGCATGAAGGAGTGTCATGAGGGACCCTGTGATGAATGTG
ATAAAACTGTCACACAAGTATGCTACTGTCCCCTCGCGAAGACTCGTTCCGTGGCGTGCT
GCTTAGAGAAGTCTTGGTCGTGCGACGGCACGTGCGGGCGCGTGTTGTCTTGCGGCGCAC
ACGTGTGTCGACGCACGTGCCACGCGCCGCCCTGCCCCGACTGCGATCTACTGCCGCAAG
CTATCATCACCTGCCCTTGTGGGAAGACTAGGATACCTAAAGACAAGCGCAAGTCGTGTG
CCGATCCGATCCCGCTGTGCGGTAACATCTGCGCCAAACCATTATCGTGTGGCCCCGCAG
GAGACAGACACTTCTGTAAACTGGACTGCCATGAAGGTCCATGCCCCGTGTGCCCCGAAA
AAACGTTGTTACCATGTCGATGTGGTCATTCCAACCGCGAGATTCCATGCGCCGAACTAC
CAGATATGTACAACAATGTGTTCTGTCAGAAGAAATGTAATAAGAAACTGTCGTGCGGTC
GTCACCGTTGTCGCGCGTGTTGTTGTGCGGACACCCAGCACCGCTGCGGACTCGTGTGCG
GACGCTCGCTGGCGTGCCAGACGCATCGCTGCCAGGACTTCTGTCACACCGGACACTGCG
CACCCTGTCCTACTCTTAGTTTCGAAGAGCTATCGTGTTCGTGCGGTCGCGAGGTGGTGT
TGCCGCCGGTCCGCTGCGGCACGCGTCCCCCGGCCTGCACCGCGCCGTGTCGCCGCCCGC
GCGCCTGCGGACACGACACACTGCACTCCTGCCACACCGGGGACTGCCCGCCCTGCGTCG
TGCTCACCACCAGGACCTGCCACGGGGGACACGAGGAACGCAAAACCATCCCGTGTTCGC
AAGAAGAGTTCTCATGCGGCCTCCCGTGCGGCAAACCCCTGCCTTGCGGTAAACACACCT
GCATCAAGGTGTGCCATAAGGGACCTTGCGACACCGGCAAATGCACTCAGCCGTGCACCG
AGAAGCGTTCAAGCTGCGGTCACCCGTGCGGCGCGGCGTGCCACTCGGGCGCGGCGGAGG
GCAGCCCGGGCGCCGCGTGTCCCAGCTCCGCGCCCTGCCGCCGCACCGTGCGCGCCACCT
GCCCCTGCAAGAGACGGTCAGCTGACAGACCCTGCTGTGAGAACGCGAGGGACTATGACA
GGATATTAGGTGCGCTTGCAGCAACTAAAATTCAAGAAGGAAGCTCTGTCGATCTCTCTG
ATGCACAACGTGTCATTAATATGCTCAAAACTTTGGAGTGCGACGACGAGTGTCGCGTAG
AGGCACGCACACGGCAGATGGCGCTGGCGCTGCAGATCCGCAACCCCGACGTGTCCGCCA
AGCTGGCGCCGCGCTACAGCGAGCACGTGCGCGCCACCGCCGCTCGCGAACCCTCCTTCG
CCAACCACGTGCACGATAGACTCACTGAACTCGTGCACCTCGCCAAGAAGTCGAAGCAGA
AGACCCGTTCACACTCGTTTCCGTCAATGAACAGACAGAAGCGACAGTTCATTCACGAGA
TGTGCGAACACTTCGGGTGCGAGAGCGTGGCGTACGACGCTGAACCCAACCGAAACGTTG
TAGCCACTGCCGATAAAGAAAAGTCGTGGTTGCCAGCTATGAGTATAATGGAAGTATTAG
CTCGCGAGGCAGGCCGGCGCCGCGTGCCCGGACCCGTGCTGCGACAACCGAACGCACCGC
ATCACGCCGCGCCCCCCACTACTCTTCCCACGAACAAGTCCGGCAGTGGATGGGCCACGC
TCACGTCGTCTAATTCCTGGGCGTCCCGCAGTCAGCCCCGGCCCTCCGCCGCGCCGCCCC
AGATAGACCACTTCGACAACCCCACGGAGAAATAGCTCAAGTAACGTTTAGCTCAACTAC
GAGACGCTTTCATTGAACTTTTTGATAAAACTTACAGTAAAAAAATTGGTTGCCTGTAAA
GTCGGTATACGGGCGAAAGTTTTACG
(4046 bp)

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