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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR20113c0_g1_i4
Scaffold_id
NCBI non-redundant
(nr)		Retrovirus-related_Pol_polyprotein_from_transposon_TNT_1-94_[Papilio_machaon]
Ontology
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:12.56 TPM:12.31
ORF EntryO_TrvaFAMAMG23697_complete:A_TrvaFAMAMG_TR20113c0_g1_i4
Sequence
(Nucleotide)
TAAAATGAACTGTTAATATTATTTGACTTTTTATTTAACACGAGGTTACAAATTACAAGT
AGTGTGAACAGAGTGACCGAGACATAGACAATTGATCATACATAGAGAATGAGTAATTTA
TGACAAAGACAAACAGAGAAGGCGGCAAATTTAAATTACATTTTACACACCCACCAAATT
AGTGCCTTCTCATATCTAATACAAATTTAACAACTAAACAATTATTCACAACAGTACGCT
GACAATTTTATTAAAATAATACATAAGAACTACTTAAATTTATTTAAAGTTATACCAATT
TTATCTTTAAGATATTGAAATCTCACACGAGCAAGTGCTTTTGTAAATATGTCAGCACAC
TGTTCTGTAGTACATAGATATTTAACATATATTTCTTTCTCTTTAAATTTTTCTTGAATA
AACTTATACTTTACATCAATGTGTTTACACCTTTTATGAAAGTCCATATTTTTAATCACT
GATATTGCACTTTGATTGTCTACATTTAAACTAATAGTATCTTGATTATATGCACCAATG
TCCAGTAGCAGTCTTTTAATCCATAATGCCTCTTTAGTTGCAGAACAAGCGGCCATAAAT
TCTGCTTCAGTCGTAGACAATGCTATGCTTTGCTGTCGCTGAGTTGCCCATGTTATTGCT
GCACCATTCTTTGTAAAAACATAGCCAGTGGTAGATCTTCTTGTGTCATTGTCAGCTGCA
TAATCAGAGTCACTATAGCCTTCTACTATATTGTTCTTCATTTTAGTATACAGTATGCCA
ATCTCTTTGGTTTCTTTCAAGTACTTAAATATCTTCTTAACAACAGCCCAGTGAGTACTA
TCGTAGCAATCTAGATAGCGACTTACTAAACTTACTCCAAACATAATGTCCGGTCTACTC
ACAATAGCAAGATGCATGAGTGATCCGACTGCTTCTCTGTATGGTATCTTTTCTTCAGGT
ACCATGCTTTTCTTCTCCAGTTTATTATGAGGATCCACAGGGATACTATTTCCATTAGCA
TTACTCATATTAAATTTATGAAGTAATTTTTCAATGTACAGTTTTTGATGAATAAAAATA
TGATCTTTAGACCTTTCTATCTGCATTCCTACATAATTGGTAGGCTCCATCGTTTTAATT
TCAAAATGTTGTTGTAGGTCATTTATAACTTTATTGATAGCAACATTATCCTTTGATATT
ATCAGTCCATCATCAATATATAAAAGAAGATATATTTTTATTTTATTTACATGACCTGTG
AACACACATTGATCAGAATGACTATTAACAAAACCAAATTTATTAAGTACAGATTTGAAT
TTGTTATTCCAACATCGTGGAGCTTGTTTTAAACCATACAAAGATCTATTCAATTTACAG
ACATAGTTTGGTGGACATTCTATTCCTTCAGGAGGATTCATGTATATATTTTCTTGAATA
TCTCCATATAGAAAAGCTGTTTTTATATCAAACTGTATTATGTTTAAATCATGTTGACAT
GCTTCTGAGAGCAGTATTCGTACTGAATCATATCTTACTGTTGGAGAGAATGTTTCTGTG
TAATTTATCTGATACTGTTGGGAACAACCTTTAGCACACAATCTGGACTTATATACTTTA
CCAGAAACATTATTTTTAATGCGAAAAACCCATTTACATCCAATTGTTTTTACTCCGGGA
GGTTTTTCCACCAGGGTCCATGTTTCATTTTTCTCATGTGCTTGTAGTTCCTCTTTTATA
GATTGTTTCCATTTTTCTTTGTTTATGGATGTTATTGCATCATTGTATGTCCGTGGTACA
TCTGTCCCTAGAAGTTCACAGAGATAAGCGTTATTGTCGTAAACTTGTTTTCTAGCTTTA
GATCTAGTTGTAACATAATTATCATGTTCAAAATCTACTTCAGTTTCAGGAACATACAGA
GAGTCATCATTAGAATGAAATGAATCATCATTGCCGGAGCTCACAGAGATGTCTTTTGAT
TCGGAACTGTTAGGTGTATTTTCCTGTAACTCTGGGCTTAGCTTCATCAGCTCATTTTCA
TTATTTTCATTTTCATTTCCATCCGTAGTTAGGGGCACAACTATATGGTTTTGAGTTAAT
GAATTTTCCATAAAAACAACGTCTCTGCTTATTATTACTTGTTTTGTTCTTGGATCTAGT
AGTTTATAGCCTTTAGTAGTATCACTGACCACATCTCCTCAGGTGTAACATAAGACAGTG
CACGGGTAGGGCAGCGGTTGGTAATATAGGCTGCTGTGGATACTGCTTCAGCCCAATAAC
ATTTCTGGCCCCTCCAAGTGATTTTACTTCCATGGGTCCGCAGACATCAGAGTGTATCAA
CTCCAGTGGTTTCTGTGCTCTAGAACCTTCAGGAGGAAACGGCAACCTGGATTGTTTTCC
CTTTTGACAAAATTCACAAATCATTTTATTTTTATTTACAACTAATTTAACTCCATTAGT
ACAATTACTAAGTTTATTCAAATCATTGAAATTTAAGTGAGCCATCCTCTTGTGCCACAA
TAAAACATCAGTCTCATTCATTTTACAACTGTATGCTGCAATAGTGTCAGTATTTAGCCT
GTACATGTTATTGATGAGATTTGCAGCTACTACTTCAGTATTCATTTTGTTGAATATCTT
ACAGCCCTGTGTTGTAAACTGTACAGAGCATCCTTTCTTTATAATCTGGCTGACGGACAA
CAAATTAGTTGTTAATTCAGGTACATACAGTACATTAGTAATTTGGATAGTTTGTTTTGA
ACCATTTGTTCCAATAACATTCAAGTCTAACTTGCCACAACTTTTTACCGGTAGCATTTT
GTTATTTGCTATCTTTATACTTGTGATCGGAGGGGGTACTTCATCGTAGAGCCAATCTTG
TCTCATTGTAAGATGCATCGAAGCACCTGAATCTATATAGAACCCATTATCATAATATTT
AGTTGTAGCAGAACTAGCGGAGAATACAGCTACATATCCTGTATCTTTATTATTATTTTG
TTTTGCTTTATTTGATTTGCAATTTTTACTTATATGTCCATATCTGTTGCAAACAAAACA
TCTCGGGCCTTTCTTTGGGATTTGCTGAAACTGCTTAGAGTTACTTTGCTTTGTGTAAAG
TACTGTAGTATTTAAATCAATAGATTTTACTTCTTGAAGTAATTTTGTTTTGATTAAGTC
GGAACTAATTTTCACACCTGAGCTTTCGATTCCCATTATCATTGGTCTATAGGATTCCGG
TAGACCGGCCAACATTAATGTGCCTAGCCACTCATCATCAACATTAAAGTTGATGTTCCT
CAGCTTATGAGCGGAGGACATTATTTTATTGACATATGATTCTACACTTTCACTTGTTTG
TAATGTTGTGTTAATTAGGTCTTTTAATAGGCCAACTTTTCTAGTTAATCCACTATCTTC
AAATGCTTGGGTGAGGTTATCCCAAACCTGTTTGGCTGTTTCTGCTTGTTGGATGTGGAC
ATACAAGATTGGATCTATTAATAATATTAATTTCGACTTAGCTTTTATGTCATCCTTCGC
TGATTTTGGATCATTCTGGTCTGGTTCTGATGTTATACAACTGTACAAGTCTTCGTGCTG
TAAGTATGCTTTAACAGCAAAACTCCAAGTGGACCAGTTGTCCCGTCCCATCAGTTTGGG
AATTGACATTGTTGTGTTGTTCATGTTGAAGCAAATCTGAAATAGCTGAAAAACAGAGAG
AACTCGCGAACCGGTAACTTTTTGAGGTTATGACCGCGTGTGTTTCTTTCAAACTATTTT
TCACTTCAATATTCCGATTATTATATTTATCACAGTCACTAAACAACACGTTAGAGCTAT
CTGGGCCCATAACCTGTTGAAATAAAATGAACTGTTAATATTATTTGACTTTTTATTTAA
CACGAGGTTACAAATTACAAGTAGTGTGAACAGAGTGAC
(3939 bp)

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