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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR20113c0_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		Retrovirus-related_Pol_polyprotein_from_transposon_TNT_1-94_[Papilio_machaon]
Ontology
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:11.65 TPM:11.41
ORF EntryO_TrvaFAMAMG23695_complete:A_TrvaFAMAMG_TR20113c0_g1_i3
Sequence
(Nucleotide)
TAAAATGAACTGTTAATATTATTTGACTTTTTATTTAACACGAGGTTACAAATTACAAGT
AGTGTGAACAGAGTGACCGAGACATAGACAATTGATCATACATAGAGAATGAGTAATTTA
TGACAAAGACAAACAGAGAAGGCGGCAAATTTAAATTACATTTTACACACCCACCAAATT
AGTGCCTTCTCATATCTAATACAAATTTAACAACTAAACAATTATTCACAACAGTACGCT
GACAATTTTATTAAAATAATACATAAGAACTACTTAAATTTATTTAAAGTTATACCAATT
TTATCTTTAAGATATTGAAATCTCACACGAGCAAGTGCTTTTGTAAATATGTCAGCACAC
TGTTCTGTAGTACATAGATATTTAACATATATTTCTTTCTCTTTAAATTTTTCTTGAATA
AACTTATACTTTACATCAATGTGTTTACACCTTTTATGAAAGTCCATATTTTTAATCACT
GATATTGCACTTTGATTGTCTACATTTAAACTAATAGTATCTTGATTATATGCACCAATG
TCCAGTAGCAGTCTTTTAATCCATAATGCCTCTTTAGTTGCAGAACAAGCGGCCATAAAT
TCTGCTTCAGTCGTAGACAATGCTATGCTTTGCTGTCGCTGAGTTGCCCATGTTATTGCT
GCACCATTCTTTGTAAAAACATAGCCAGTGGTAGATCTTCTTGTGTCATTGTCAGCTGCA
TAATCAGAGTCACTATAGCCTTCTACTATATTGTTCTTCATTTTAGTATACAGTATGCCA
ATCTCTTTGGTTTCTTTCAAGTACTTAAATATCTTCTTAACAACAGCCCAGTGAGTACTA
TCGTAGCAATCTAGATAGCGACTTACTAAACTTACTCCAAACATAATGTCCGGTCTACTC
ACAATAGCAAGATGCATGAGTGATCCGACTGCTTCTCTGTATGGTATCTTTTCTTCAGGT
ACCATGCTTTTCTTCTCCAGTTTATTATGAGGATCCACAGGGATACTATTTCCATTAGCA
TTACTCATATTAAATTTATGAAGTAATTTTTCAATGTACAGTTTTTGATGAATAAAAATA
TGATCTTTAGACCTTTCTATCTGCATTCCTACATAATTGGTAGGCTCCATCGTTTTAATT
TCAAAATGTTGTTGTAGGTCATTTATAACTTTATTGATAGCAACATTATCCTTTGATATT
ATCAGTCCATCATCAATATATAAAAGAAGATATATTTTTATTTTATTTACATGACCTGTG
AACACACATTGATCAGAATGACTATTAACAAAACCAAATTTATTAAGTACAGATTTGAAT
TTGTTATTCCAACATCGTGGAGCTTGTTTTAAACCATACAAAGATCTATTCAATTTACAG
ACATAGTTTGGTGGACATTCTATTCCTTCAGGAGGATTCATGTATATATTTTCTTGAATA
TCTCCATATAGAAAAGCTGTTTTTATATCAAACTGTATTATGTTTAAATCATGTTGACAT
GCTTCTGAGAGCAGTATTCGTACTGAATCATATCTTACTGTTGGAGAGAATGTTTCTGTG
TAATTTATCTGATACTGTTGGGAACAACCTTTAGCACACAATCTGGACTTATATACTTTA
CCAGAAACATTATTTTTAATGCGAAAAACCCATTTACATCCAATTGTTTTTACTCCGGGA
GGTTTTTCCACCAGGGTCCATGTTTCATTTTTCTCATGTGCTTGTAGTTCCTCTTTTATA
GATTGTTTCCATTTTTCTTTGTTTATGGATGTTATTGCATCATTGTATGTCCGTGGTACA
TCTGTCCCTAGAAGTTCACAGAGATAAGCGTTATTGTCGTAAACTTGTTTTCTAGCTTTA
GATCTAGTTGTAACATAATTATCATGTTCAAAATCTACTTCAGTTTCAGGAACATACAGA
GAGTCATCATTAGAATGAAATGAATCATCATTGCCGGAGCTCACAGAGATGTCTTTTGAT
TCGGAACTGTTAGGTGTATTTTCCTGTAACTCTGGGCTTAGCTTCATCAGCTCATTTTCA
TTATTTTCATTTTCATTTCCATCCGTAGTTAGGGGCACAACTATATGGTTTTGAGTTAAT
GAATTTTCCATAAAAACAACGTCTCTGCTTATTATTACTTGTTTTGTTCTTGGATCTAGT
AGTTTATAGCCTTTAGTAGTATCACTGTAACCAATAAAAATCATTTTGCTTGCCTTAGGA
TCTAGTTTTTGAAGTTTCTCTCTTGGTATTTTGACCATAGCTTCACATCCAAATATTTTT
AAATGATTTACATCAGGTTTCTTACCTGACCACATCTCCTCAGGTGTAACATAAGACAGT
GCACGGGTAGGGCAGCGGTTGGTAATATAGGCTGCTGTGGATACTGCTTCAGCCCAATAA
CATTTCTGGCCCCTCCAAGTGATTTTACTTCCATGGGTCCGCAGACATCAGAGTGTATCA
ACTCCAGTGGTTTCTGTGCTCTAGAACCTTCAGGAGGAAACGGCAACCTGGATTGTTTTC
CCTTTTGACAAAATTCACAAATCATTTTATTTTTATTTACAACTAATTTAACTCCATTAG
TACAATTACTAAGTTTATTCAAATCATTGAAATTTAAGTGAGCCATCCTCTTGTGCCACA
ATAAAACATCAGTCTCATTCATTTTACAACTGTATGCTGCAATAGTGTCAGTATTTAGCC
TGTACATGTTATTGATGAGATTTGCAGCTACTACTTCAGTATTCATTTTGTTGAATATCT
TACAGCCCTGTGTTGTAAACTGTACAGAGCATCCTTTCTTTATAATCTGGCTGACGGACA
ACAAATTAGTTGTTAATTCAGGTACATACAGTACATTAGTAATTTGGATAGTTTGTTTTG
AACCATTTGTTCCAATAACATTCAAGTCTAACTTGCCACAACTTTTTACCGGTAGCATTT
TGTTATTTGCTATCTTTATACTTGTGATCGGAGGGGGTACTTCATCGTAGAGCCAATCTT
GTCTCATTGTAAGATGCATCGAAGCACCTGAATCTATATAGAACCCATTATCATAATATT
TAGTTGTAGCAGAACTAGCGGAGAATACAGCTACATATCCTGTATCTTTATTATTATTTT
GTTTTGCTTTATTTGATTTGCAATTTTTACTTATATGTCCATATCTGTTGCAAACAAAAC
ATCTCGGGCCTTTCTTTGGGATTTGCTGAAACTGCTTAGAGTTACTTTGCTTTGTGTAAA
GTACTGTAGTATTTAAATCAATAGATTTTACTTCTTGAAGTAATTTTGTTTTGATTAAGT
CGGAACTAATTTTCACACCTGAGCTTTCGATTCCCATTATCATTGGTCTATAGGATTCCG
GTAGACCGGCCAACATTAATGTGCCTAGCCACTCATCATCAACATTAAAGTTGATGTTCC
TCAGCTTATGAGCGGAGGACATTATTTTATTGACATATGATTCTACACTTTCACTTGTTT
GTAATGTTGTGTTAATTAGGTCTTTTAATAGGCCAACTTTTCTAGTTAATCCACTATCTT
CAAATGCTTGGGTGAGGTTATCCCAAACCTGTTTGGCTGTTTCTGCTTGTTGGATGTGGA
CATACAAGATTGGATCTATTAATAATATTAATTTCGACTTAGCTTTTATGTCATCCTTCG
CTGATTTTGGATCATTCTGGTCTGGTTCTGATGTTATACAACTGTACAAGTCTTCGTGCT
GTAAGTATGCTTTAACAGCAAAACTCCAAGTGGACCAGTTGTCCCGTCCCATCAGTTTGG
GAATTGACATTGTTGTGTTGTTCATGTTGAAGCAAATCTGAAATAGCTGAAAAACAGAGA
GAACTCGCGAACCGGTAACTTTTTGAGGTTATGACCGCGTGTGTTTCTTTCAAACTATTT
TTCACTTCAATATTCCGATTATTATATTTATCACAGTCACTAAACAACACGTTAGAGCTA
TCTGGGCCCATAACCTGTTGAAATAAAATGAACTGTTAATATTATTTGACTTTTTATTTA
ACACGAGGTTACAAATTACAAGTAGTGTGAACAGAGTGAC
(4060 bp)

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