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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR20113c0_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		Retrovirus-related_Pol_polyprotein_from_transposon_TNT_1-94_[Papilio_machaon]
Ontology
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:27.60 TPM:27.04
ORF EntryO_TrvaFAMAMG23694_complete:A_TrvaFAMAMG_TR20113c0_g1_i2
Sequence
(Nucleotide)
TAAAATGAACTGTTAATATTATTTGACTTTTTATTTAACACGAGGTTACAAATTACAAGT
AGTGTGAACAGAGTGACCGAGACATAGACAATTGATCATACATAGAGAATGAGTAATTTA
TGACAAAGACAAACAGAGAAGGCGGCAAATTTAAATTACATTTTACACACCCACCAAATT
AGTGCCTTCTCATATCTAATACAAATTTAACAACTAAACAATTATTCACAACAGTACGCT
GACAATTTTATTAAAATAATACATAAGAACTACTTAAATTTATTTAAAGTTATACCAATT
TTATCTTTAAGATATTGAAATCTCACACGAGCAAGTGCTTTTGTAAATATGTCAGCACAC
TGTTCTGTAGTACATAGATATTTAACATATATTTCTTTCTCTTTAAATTTTTCTTGAATA
AACTTATACTTTACATCAATGTGTTTACACCTTTTATGAAAGTCCATATTTTTAATCACT
GATATTGCACTTTGATTGTCTACATTTAAACTAATAGTATCTTGATTATATGCACCAATG
TCCAGTAGCAGTCTTTTAATCCATAATGCCTCTTTAGTTGCAGAACAAGCGGCCATAAAT
TCTGCTTCAGTCGTAGACAATGCTATGCTTTGCTGTCGCTGAGTTGCCCATGTTATTGCT
GCACCATTCTTTGTAAAAACATAGCCAGTGGTAGATCTTCTTGTGTCATTGTCAGCTGCA
TAATCAGAGTCACTATAGCCTTCTACTATATTGTTCTTCATTTTAGTATACAGTATGCCA
ATCTCTTTGGTTTCTTTCAAGTACTTAAATATCTTCTTAACAACAGCCCAGTGAGTACTA
TCGTAGCAATCTAGATAGCGACTTACTAAACTTACTCCAAACATAATGTCCGGTCTACTC
ACAATAGCAAGATGCATGAGTGATCCGACTGCTTCTCTGTATGGTATCTTTTCTTCAGGT
ACCATGCTTTTCTTCTCCAGTTTATTATGAGGATCCACAGGGATACTATTTCCATTAGCA
TTACTCATATTAAATTTATGAAGTAATTTTTCAATGTACAGTTTTTGATGAATAAAAATA
TGATCTTTAGACCTTTCTATCTGCATTCCTACATAATTGGTAGGCTCCATCGTTTTAATT
TCAAAATGTTGTTGTAGGTCATTTATAACTTTATTGATAGCAACATTATCCTTTGATATT
ATCAGTCCATCATCAATATATAAAAGAAGATATATTTTTATTTTATTTACATGACCTGTG
AACACACATTGATCAGAATGACTATTAACAAAACCAAATTTATTAAGTACAGATTTGAAT
TTGTTATTCCAACATCGTGGAGCTTGTTTTAAACCATACAAAGATCTATTCAATTTACAG
ACATAGTTTGGTGGACATTCTATTCCTTCAGGAGGATTCATGTATATATTTTCTTGAATA
TCTCCATATAGAAAAGCTGTTTTTATATCAAACTGTATTATGTTTAAATCATGTTGACAT
GCTTCTGAGAGCAGTATTCGTACTGAATCATATCTTACTGTTGGAGAGAATGTTTCTGTG
TAATTTATCTGATACTGTTGGGAACAACCTTTAGCACACAATCTGGACTTATATACTTTA
CCAGAAACATTATTTTTAATGCGAAAAACCCATTTACATCCAATTGTTTTTACTCCGGGA
GGTTTTTCCACCAGGGTCCATGTTTCATTTTTCTCATGTGCTTGTAGTTCCTCTTTTATA
GATTGTTTCCATTTTTCTTTGTTTATGGATGTTATTGCATCATTGTATGTCCGTGGTACA
TCTGTCCCTAGAAGTTCACAGAGATAAGCGTTATTGTCGTAAACTTGTTTTCTAGCTTTA
GATCTAGTTGTAACATAATTATCATGTTCAAAATCTACTTCAGTTTCAGGAACATACAGA
GAGTCATCATTAGAATGAAATGAATCATCATTGCCGGAGCTCACAGAGATGTCTTTTGAT
TCGGAACTGTTAGGTGTATTTTCCTGTAACTCTGGGCTTAGCTTCATCAGCTCATTTTCA
TTATTTTCATTTTCATTTCCATCCGTAGTTAGGGGCACAACTATATGGTTTTGAGTTAAT
GAATTTTCCATAAAAACAACGTCTCTGCTTATTATTACTTGTTTTGTTCTTGGATCTAGT
AGTTTATAGCCTTTAGTAGTATCACTGTAACCAATAAAAATCATTTTGCTTGCCTTAGGA
TCTAGTTTTTGAAGTTTCTCTCTTGGTATTTTGACCATAGCTTCACATCCAAATATTTTT
AAATGATTTACATCAGGTTTCTTACCTGACCACATCTCCTCAGGTGTAACATAAGACAGT
GCACGGGTAGGGCAGCGGTTGGTAATATAGGCTGCTGTGGATACTGCTTCAGCCCAATAA
CATTTCTGTAAATCAGAGTTAATTAGCATACAGCGTGCCCTTTCCATTAGTGTGCGATTC
ATACGCTCAGCTAAACCATTCTGTTGAGGTGTATATGAGTTAGAAGTCTGATGGATAATT
CCTGACATCTTTAGGTAATTTGAAAATTCATTACTAAGGTATTCTCTACCATTATCAGAA
CGGAGGCTTTTAATTTTAAAATCAAGTTGATTCTCAACTAAGACTTTATACTCTTTGAAT
TTTGAAAATACTTCTGACTTGTTATGCAAAAAATATACATACACTTTTCTGGTGAAATCA
TCAATGAATGTAAGGAAATACCTGGCCCCTCCAAGTGATTTTACTTCCATGGGTCCGCAG
ACATCAGAGTGTATCAACTCCAGTGGTTTCTGTGCTCTAGAACCTTCAGGAGGAAACGGC
AACCTGGATTGTTTTCCCTTTTGACAAAATTCACAAATCATTTTATTTTTATTTACAACT
AATTTAACTCCATTAGTACAATTACTAAGTTTATTCAAATCATTGAAATTTAAGTGAGCC
ATCCTCTTGTGCCACAATAAAACATCAGTCTCATTCATTTTACAACTGTATGCTGCAATA
GTGTCAGTATTTAGCCTGTACATGTTATTGATGAGATTTGCAGCTACTACTTCAGTATTC
ATTTTGTTGAATATCTTACAGCCCTGTGTTGTAAACTGTACAGAGCATCCTTTCTTTATA
ATCTGGCTGACGGACAACAAATTAGTTGTTAATTCAGGTACATACAGTACATTAGTAATT
TGGATAGTTTGTTTTGAACCATTTGTTCCAATAACATTCAAGTCTAACTTGCCACAACTT
TTTACCGGTAGCATTTTGTTATTTGCTATCTTTATACTTGTGATCGGAGGGGGTACTTCA
TCGTAGAGCCAATCTTGTCTCATTGTAAGATGCATCGAAGCACCTGAATCTATATAGAAC
CCATTATCATAATATTTAGTTGTAGCAGAACTAGCGGAGAATACAGCTACATATCCTGTA
TCTTTATTATTATTTTGTTTTGCTTTATTTGATTTGCAATTTTTACTTATATGTCCATAT
CTGTTGCAAACAAAACATCTCGGGCCTTTCTTTGGGATTTGCTGAAACTGCTTAGAGTTA
CTTTGCTTTGTGTAAAGTACTGTAGTATTTAAATCAATAGATTTTACTTCTTGAAGTAAT
TTTGTTTTGATTAAGTCGGAACTAATTTTCACACCTGAGCTTTCGATTCCCATTATCATT
GGTCTATAGGATTCCGGTAGACCGGCCAACATTAATGTGCCTAGCCACTCATCATCAACA
TTAAAGTTGATGTTCCTCAGCTTATGAGCGGAGGACATTATTTTATTGACATATGATTCT
ACACTTTCACTTGTTTGTAATGTTGTGTTAATTAGGTCTTTTAATAGGCCAACTTTTCTA
GTTAATCCACTATCTTCAAATGCTTGGGTGAGGTTATCCCAAACCTGTTTGGCTGTTTCT
GCTTGTTGGATGTGGACATACAAGATTGGATCTATTAATAATATTAATTTCGACTTAGCT
TTTATGTCATCCTTCGCTGATTTTGGATCATTCTGGTCTGGTTCTGATGTTATACAACTG
TACAAGTCTTCGTGCTGTAAGTATGCTTTAACAGCAAAACTCCAAGTGGACCAGTTGTCC
CGTCCCATCAGTTTGGGAATTGACATTGTTGTGTTGTTCATGTTGAAGCAAATCTGAAAT
AGCTGAAAAACAGAGAGAACTCGCGAACCGGTAACTTTTTGAGGTTATGACCGCGTGTGT
TTCTTTCAAACTATTTTTCACTTCAATATTCCGATTATTATATTTATCACAGTCACTAAA
CAACACGTTAGAGCTATCTGGGCCCATAACCTGTTGAAATAAAATGAACTGTTAATATTA
TTTGACTTTTTATTTAACACGAGGTTACAAATTACAAGTAGTGTGAACAGAGTGAC
(4376 bp)

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