SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR20095c0_g1_i4
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC101741377_isoform_X4_[Bombyx_mori]
Ontology
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0003726 F double-stranded RNA adenosine deaminase activity
GO:0004000 F adenosine deaminase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006382 P adenosine to inosine editing
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008285 P negative regulation of cell population proliferation
GO:0016787 F hydrolase activity
GO:0030336 P negative regulation of cell migration
GO:0044387 P negative regulation of protein kinase activity by regulation of protein phosphorylation
GO:0044822 F RNA binding
GO:0045070 P positive regulation of viral genome replication
GO:0046872 F metal ion binding
GO:0051726 P regulation of cell cycle
Transcript
Level		FPKM:2.47 TPM:2.42
ORF EntryO_TrvaFAMAMG23628_complete:A_TrvaFAMAMG_TR20095c0_g1_i4
Sequence
(Nucleotide)
GGGGGGTGTGTGGGGGGGGGTGGGGGTGTGTTCTACCGTAGCGGCGCGTTGTCGGTGGGG
TTGTCGGTGAAGTGCACGCCGAACATGGCCTCGCACGCACCCCGCGCCGCCAGCTTGCGA
GCCTCGCGCTTGTTGCACGCTTTCCCTATGTAGGTCTGTCCGTCGATGACGAGCCCCACA
GTGAACTGCATGGTCTGGGGTCGGTCCCCCTCGGCCCCCAGCTCGCGGTAGTCCTGCGAG
GGTCGCATGTAGGCGAGGAGCATGCAGGGGTGCATGGAGCTGGCGTTCTTGGGGAGCTCC
TTGACTTTCTTGACGGGGGTGGGGGGCGCGGGGGATGATGTTGACGAGCTCTCTTGTTCA
GTTCCGTTAGCAGCGGGTCTGAGGATGGGCACTTTGTATCCCTCCCCCTCCCACTCCGAG
AACAGCTTGTGCAGCGCGAAGGACGCCAGCTGGATCATCGGCAGAGCTTCCTCGTCGCCC
TCACTCTCGGCGCCGGTTTCAGCACATTTCTTTATTTTCTTGATGATGATATCTCTGACC
GCCTGCTCCGCCGCATTGCTACGGGCTACCAACTTGTTCTCACCAAATCCTTTATATTCG
TTTCCTTCAATGGTGAGTGTAGCACAGAATGTCTGATTAGCTTGTTTGTAGTATTTATTT
GCGTTTGCTTCCACTTTGAATTGCTTGGCAATGTCTTCCTTGGGTATCATCTCGTTGATA
ACCATGACGGCATTCTTGGGAGTGAGGAGCCGACGCAAGTGTTGGTTCTGACGACGGCGA
CGCTCCTTGTTGGTCACCTTTTTAACTCCCGCTAACTTAGATTTCATCCAGGCGGGTTTC
TCAACTGTATCGCTCAAATCTGACATGTTGGAGTCATTATGATATTGTTGTTGTACGTTC
TGTGTTGTTGGTATCGACTGCTCGCCGTAGTTGTGCAGCTGAAGACATTAAGCCGTGACC
GATCATGTGTTACACCTCTCACACACACACACATACACGCAACTATATAGAATTCTAACT
TTTAAATTCTTCACAACTCATGAGCGACGGTAACCACCAAGCAGTAATACATAAAACAAT
GCAAAAGTTTTCTTATTATTTTTGTTTAATAATTTTTGTATTTTACTTCTTGTAGAAAGA
TGTAGTGCAAAGGAAAACCAAAATCTTATAGCATAACTGAAATGAGAATAAAATAGTAAT
TTCAAATGAACATTTACATACTATCAGAATTTAATATTTTCAGCTACTAGTACCACTATT
ACTATAGTAAATAAATACCACATTCATACAAACAAACACCCAGTGAAGATGTAACAACAT
CATCTATCTAACTCGAATATCCTTTCATGTACGTCAGCCCAGTGAAATTGCAACTTTATT
TACTTGTAATAAGACTCAAATGTCACCAATTTAACCAGTTACAATTTAAGAGGGTTTATA
CATGCAAGGTTATTGAGTAGCTAATGTCTAGTCTAAAGAAATGTGTATAAATGCTGGACA
TTCATACACCATTCTCATATACATGGTTGCTCTCGGAGAGGCTTTGGTTCTTTTAGGACT
TATTTAAACGAAAATCGAGTATTTATAAATTTATTGATGGTCCTCTGACATCACTGTTCA
AAATAGTCAAAAGTAAATTGTGAAGAACTTTAAGAATTGTAGATATTTAGATAACAAATA
AATTAAAATGCAAAATCTATTTTAAGAAAAAAAAAAAAAACCTAAATATTTAACTAATAG
GAAACTATGTTTTTATAAGTGTCAAAGGTTATGTAGCCTTCCATACTCTTAAAAAAAGGC
AAACAATATCTCATTAAGTTCCAATTATCAATTAATTGTACTATTCTGCAATTCAACTAT
TTAATCCAAATATTTCTGTCCTCCACACTATTAACAATGTTATTTAATTACATTATTAAC
AATGTATTATAAGAAACCTCAGCGCTGTCCGAGAGAAACCAATCAATATTATTCCTCGGC
GGACTCACCACACATGGCGCTGGTTCTGGAACTGGGGTGGTTGAGCCAAGTTGAAGTGGT
TTACAGCTCGGGATTTGTTAGAGTTATACGCCATTTTACAAGCCGATAGTTCGCTTTGTG
TTTGTACTGAAAATCACTAATATCTTTCAGTTATGGTAGATTCCGAGATATTAGTGTTTA
TCAAAATACTTTTTACACTTTTTAGTCTAATGTAGGATAACTTTTGAAAATAAATTAACG
ATCCTAAAATGCGAATCTACCACAATTTCACACAGAATTTACACAAATTTTGAGACAATT
TGGGTCGATAATTATG
(2296 bp)

- SilkBase 1999-2023 -