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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR20090c0_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_protein_eyes_shut-like_[Bombyx_mori]
Ontology
GO:0000902 P cell morphogenesis
GO:0005201 F extracellular matrix structural constituent
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0009986 C cell surface
GO:0010378 P temperature compensation of the circadian clock
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031513 C non-motile cilium
GO:0042052 P rhabdomere development
Transcript
Level		FPKM:2.23 TPM:2.18
ORF EntryO_TrvaFAMAMG23608_complete:A_TrvaFAMAMG_TR20090c0_g1_i3
Sequence
(Nucleotide)
TTGCATTAGATAATAATTATTTAATAAAAATACAAGACAATCCTACATAGTTAAGACTAG
ATTTGTACCATGCGGTATGAATATGAGTAAAATTTATATGCAACAAATTAATCAATATTT
TACGTAACTTCTTTATATAGTGTTTCCTAGGTTTTTATTTATTTTAAATTAAAATATAGG
ATGAGAATATAGGTAAATTGGGGTTTTCGAAAAAGGCGGATATCTGTACAGATTTTTTTC
CTGGACACTTTGGCTTCTCTTAACTTCAACAAACGTATAAAAAATAACAAAACAATTGAC
TAAATTGCACACACAATTAATTAAAAATATTTGTATAAAATTACTTAAGTGGGAGGGAAC
AATTGGCAAGACTTGATATTTTTGCTGTAAACTTCAGTAAAGTTGGTGATGTAAGTGTTT
TCTTTTATTGATATATGATCTATGCATCCTTTGAAATTATTTGGAAACAGTTTTTTTGCT
ATATCATTATCTTCATCAGTTATACCACCAATAAGTAGTTCTGTATAGTTTCGATGATAT
GAAACTCCTGGTTCTACAAAATACGCTTGTGTCTTATCAACTGTAACATTTACATTCTCT
TTATTGACTTTCAGGATCATCGTATGCCATTCTCCATCAGCGAGGAATCCAATATGAGGG
ATTGTTTTTGAGAAAAATGTCGATGATTTAAAATTATTATCCAAATTTAAATTCCTCAAA
TGGAGAGAGTAACTAAGTTTGAGGTATCCATCTTCAAGACCTAAACCAATGTAATCTGTA
TCCATTAGTGCCCAGAATAAGAGTCCATTGAACTCCGCAGTAGTGAAATTGAGTGATACA
TAGTCAGCGCTGATGTGACTAGAGTTGACTTGATAATCACCCTGTATCAGCAGTCGAGAC
GGCGATATTAAAGAAGTGCCATCGAATTGTGGTATCGATATATTATTTTGGTGACAGGCG
TGGTGCATGCAGACGGTGCGTGTGGGTGCGCGCCGGCCCGCTCCAGCACGCACCCCCCCC
CTCCCTGTATGTATTGCGCGTGTGTATTGACGGTGACAGACGTGGTGCATGCAGACGGTG
CGTGCCGCGACACCGCGCGCCGCCCCGCTCCAGCACGCAGCCTCCAGGACACGCCTCTCC
CCCGCACGCCGTCCCATCGCAGTCCAGGACGTTCTGGCCCTCTTTAATATTGTGTTGTTC
CAAGAGCAACAATACATTGTTGATGTGAAAATTTCTGATGCATCCAGTGAAAGATTCAAA
TGCGCCGGACATCGCTTCAAACGGTAATGTAGATAGATCTTTGGACCCTCCAAGTAGTAT
AGTGGCATTAGCGAGAGTGTGAGGGTAGGCGTGCGCCAACATAGCCTCGGTGCTGAGAGT
CCCGTCCACCCACACGTAGAGGCGGCTGCCGTAGCGCCCCGCCTTCACGCTGTGCCACTG
CGACATGGACAGCACGGCGCCGCTGCGGACTAGCGATGTGAGGCCGGATACTCGATCAGT
CCAACGATACTCCAGTAGTCCACCTTGTAGCGACAATGCCGTATAGAAATGTGGCGTGTT
GGCAAACACCACCAGACCTCGTTCCCTGTTCGGTTTTATTTCAACCTCCAGAGAAACACT
GACGCTTGTCAATAATCTGGGATACAATTTAATGTAGGATCTCACTCCAGTGAATAAAAC
GTCGGTTGGGTATAATTCTTGATCGCAGTTAATACCAGCTCTTCCATAAGGGCAGTCACA
ATCGGCGCGGTCGTCGGTCGCCACCACGCACTGACCCTGACATTTAGAGACGAGAGCGTC
GCACGGGTTGCGCTCACTCGAACAAGTTGCACCATAAGAACCTTCGTTGCAGATGCAGCC
ATAAGTAGCAGGCGAATGTATGCAGATCCCCCGTGGTGAGTTACAGGACTTGGCCGTGCA
TTGCGCTACTCCACACTGACCCACACCGCGACCCCCCGACACGCCGCCGCCTGCTGCCTG
ACCCCCCACATCCCAAATACAGCCCCGCCAGCCGCTATGTAGAGGCAAGTCATGGGGCAA
GTTGCTGAAACCTTCTGATGGGTGACCACCAATAAAAAGGTATGGCAGTAGCGTCATCTT
GTCGTGGTTGGCGGGCGCGTTGCCGGTCGCATTGAGCCTGCCGTCCACGGCCAGCCCGGC
GGCGCGGCCTCGGCGCCACACGCGCACCGCGTGCCCGCCGCGACGGTAGCTCAGGGCGCG
AGACGTAAACACGCGACGAGCACCATTCCCCATATTCCAAGACAGCATAATGTAGCCTTT
GACAAATGTCACGGCCAAATGTTGGCTTTTCGAGTGATGCTTGCCGTTCTGTCCCACAAA
TGCCAGTAAAGCTATCTGGTCCATATCGGGCGTTTGGAACCGAAGACGAAGGTCGAAGCG
ATCTGAGTTCATAGCGGCTGGAGACAGCGGGTACACGAGGTAGGACGATACTCCTGTACT
GATCGGTGCTAAGGATGGACGAGTTATTGCTACATTATATTCGCATAATATTCCGTGTTT
TCCATACGGACAGAGGCAGAGAAATCCACTGCCGGGATGACGCACGCAGCTTCCGCCTGA
CTGACACGGGTTGTTCTCACATACGGATACGTTGCACTGGATACCCACCCAACCATTAGC
ACAGGAACAAGTGTAACCTCCATTAGTATCTTTACATGATCCTCCATTGAGGCAGGGCGA
AGAGAGACAAGACAATGATGTACATTCTGTTACGTCACCGCCATCGAACGCTGAACTAAA
TATGTCACGAACAACACCGTTTACCATTAAATCTTTAATGCATCCCATAAACGGTTTTGT
TTCCGAGTCTCTGATTTCAGGTGAGTTTCCTAAATATAGAGTTGCGTTTTGATGAAGAGT
TGTTATGTTCGCGACTTGTCCACCACTCATGGCTACTGTGTCGTTTAAACGTAATGTTGC
ATTACAATGCTGCTCTTTTAGATATAAATTCAGTCTTGTTTCAATTTTCATAGGAAACCC
CTTATTTACGTAAGTTTTCAGTTCACTAAGCAGCATAGTTTGGAAACCACAAGAGAATTT
AAATTTGAGCAACCCCGAATGCATGTAGAGTTGCATATAAACCCCATTGGCAATATCAAC
GAACATTATTTGACCATCCGATATCAAAGTCTTGGCGTTGAAAGCGATACTGAAAGATGT
ACTGTTTCGTATCTTGTGAACGATGTAGGAATCGCCACTGAAAGCTGCTGAGGTTACAGT
GATCGTATCTTCACAAAATTTACCGGAATGCTTGAAATTGCAGTGGCATCGAAATCCATG
AGGAGTATTGACACAAGTACCTTGATTGTTACAAATTGCGTCAGAACATTCTAGAAAAGC
AGTCGTGTGAGATATACTTTCTGTGGTTGAATGTCTGTCTGATGTTGTTTCCATTGATTC
AGTAGTAACCGGTATCAAAGGTGACGGCAGCTCTGTAGTGTAATGTTCTGTAGGAGTATC
GGTAAACATCTTTTGAGTTGCTATATCCGTCTGAGGAGTTGATGTTATTTCAGCTATAAC
GTCTTTTGAAGTCGTTTGTAATTCAGTTGTTGCTAATTCTGTTGTCAAAGGAACTGATTC
TGTAGTCTCTCTAGTTAAAGGTATATAAATTGGAGTAGTATCAGTTAATAATGTTGTGTC
CAATGAAACATTTGTTGCTATACTTGTAGTATAATCTTTGCAGTCAATAAGCTCAGTGGT
AGTTTCGACTTTCGAATTATCAATTTCCAAAGTCACTTTGGTTTCTTCTCGATCAATGAT
TTCAGTTACATCATTTGTTTCAGTAGTTACTTCTATAGTAGTAGTATCTAACTTTTCAGT
TATATTACTGCTTAACGTAGTTGCAGTGTCTGTTACAGGACTTCTACTATCAGTGGTTTC
AGACGTCATATTTGTAATAACAATAATAGGAGTTTGATAGCCATCTGTTGTACTAAGCCA
ATATGTAGTTTCGGATGTTGTTATCGAGAAATTATTCCTTTCAGTTGTAAAATCTTCTCT
TATTGATGAAGTAATAGAAAGAGTGATTTCGGGTCTTGGTGTTGGACTGACATAGTCACA
GTCAGAAGTATTATTATCTAAGATTAGACATTCACACAATGATCCAGTCAATGTTGGTGG
ACATGAACATGTGAAATTATCGATTCCATCAATACAAGTTCCTCCATTCATACATCTTGG
TCCCAGTAAGCATTCGTCATATTGAAGTTCACATCGTTCCCCATGGTAATCGGGGACGCA
ATAGCAAACTCGAATACCATCTTCGACAACACACAGTGCATCATTACTGCAAGAATTGTC
GTCACAAAATTCGATTTGTACTTCGCAACTTTTTCCCGTGAATCCATAGCTACAGGCACA
CATGTAATCGGCATGGATATCAATACACACTCCTCCGTTTTGGCACGGATTCGATTGGCA
TTCATCAATTTGTTCCTCGCATGTAGCACCTGCCCATCCAGAAGAGCATTTGCAGAAGAA
CTTATAGCCAGGTCCCTCAATGCACTCGGCGCCGTTGTAACACCGTACTTCAGTGGAGTT
GCACATTGCTACATCCAGGTCACAGTGTTCTCCAGAGTATCCCGGAACACATGAACACAT
GTACCCGTTGGTGAGGTCGATGCAGGTGCCATTGTTCAAACAAGGGTTCGATTCACACTC
GTTGAAATTGGTCTCGCAGTTATCACCTATGAATCCCTCAGGACAGGAACAGTTGTATGA
AGCTACGCCATCGATACAGCTACCTCCGTTCAAGCAGGGACTGGACCAGCACTCATCCCA
GTTGGTTTGACACTGCACTCCAGTGTAACCATCCACACAGTAACAGGAATATGTACTATT
AACATCGTCGATGCATATTCCGTGCAGGCAAGGGTTGCTAAGGCAAGATAGGCCAGCAGA
TACCACCCTGACCGCGGCTAACCACCACACAGCACGCAAACACGCTTTTACTTTCTCATA
CATTTTTCATAAAAAAATTATAAACTGACTTTATTCATATTGATTAAATAAAATTGGTAT
TATTCAGTTAAAAGATCG
(5058 bp)

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