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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR20090c0_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_protein_eyes_shut-like_[Bombyx_mori]
Ontology
GO:0000902 P cell morphogenesis
GO:0005201 F extracellular matrix structural constituent
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0009986 C cell surface
GO:0010378 P temperature compensation of the circadian clock
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031513 C non-motile cilium
GO:0042052 P rhabdomere development
Transcript
Level		FPKM:0.92 TPM:0.90
ORF EntryO_TrvaFAMAMG23603_complete:A_TrvaFAMAMG_TR20090c0_g1_i2
Sequence
(Nucleotide)
TTGCATTAGATAATAATTATTTAATAAAAATACAAGACAATCCTACATAGTTAAGACTAG
ATTTGTACCATGCGGTATGAATATGAGTAAAATTTATATGCAACAAATTAATCAATATTT
TACGTAACTTCTTTATATAGTGTTTCCTAGGTTTTTATTTATTTTAAATTAAAATATAGG
ATGAGAATATAGGTAAATTGGGGTTTTCGAAAAAGGCGGATATCTGTACAGATTTTTTTC
CTGGACACTTTGGCTTCTCTTAACTTCAACAAACGTATAAAAAATAACAAAACAATTGAC
TAAATTGCACACACAATTAATTAAAAATATTTGTATAAAATTACTTAAGTGGGAGGGAAC
AATTGGCAAGACTTGATATTTTTGCTGTAAACTTCAGTAAAGTTGGTGATGTAAGTGTTT
TCTTTTATTGATATATGATCTATGCATCCTTTGAAATTATTTGGAAACAGTTTTTTTGCT
ATATCATTATCTTCATCAGTTATACCACCAATAAGTAGTTCTGTATAGTTTCGATGATAT
GAAACTCCTGGTTCTACAAAATACGCTTGTGTCTTATCAACTGTAACATTTACATTCTCT
TTATTGACTTTCAGGATCATCGTATGCCATTCTCCATCAGCGAGGAATCCAATATGAGGG
ATTGTTTTTGAGAAAAATGTCGATGATTTAAAATTATTATCCAAATTTAAATTCCTCAAA
TGGAGAGAGTAACTAAGTTTGAGGTATCCATCTTCAAGACCTAAACCAATGTAATCTGTA
TCCATTAGTGCCCAGAATAAGAGTCCATTGAACTCCGCAGTAGTGAAATTGAGTGATACA
TAGTCAGCGCTGATGTGACTAGAGTTGACTTGATAATCACCCTGTATCAGCAGTCGAGAC
GGCGATATTAAAGAAGTGCCATCGAATTGTGGTATCGATATATTATTTTCTGTGAAAAGT
TTGAAACGGTATTTTAAACTATTAAGGTACTATTACTACCTTTTTTATTAGTTATGGGTT
AATATTGGTGTAGTTAATGTATGGTGGTGCATGCCTGTATTTATAGCTAGTGTGTATTGA
CGGTGACAGACGTGGTGCATGCAGACGGTGCGTGTGGGTGCGCGCCGGCCCGCTCCAGCA
CGCACCCCCCCCCTCCCTGTATGTATTGCGCGTGTGTATTGACGGTGACAGACGTGGTGC
ATGCAGACGGTGCGTGCCGCGACACCGCGCGCCGCCCCGCTCCAGCACGCAGCCTCCAGG
ACACGCCTCTCCCCCGCACGCCGTCCCATCGCAGTCCAGGACGTTCTGGCCCTCTTTAAT
ATTGTGTTGTTCCAAGAGCAACAATACATTGTTGATGTGAAAATTTCTGATGCATCCAGT
GAAAGATTCAAATGCGCCGGACATCGCTTCAAACGGTAATGTAGATAGATCTTTGGACCC
TCCAAGTAGTATAGTGGCATTAGCGAGAGTGTGAGGGTAGGCGTGCGCCAACATAGCCTC
GGTGCTGAGAGTCCCGTCCACCCACACGTAGAGGCGGCTGCCGTAGCGCCCCGCCTTCAC
GCTGTGCCACTGCGACATGGACAGCACGGCGCCGCTGCGGACTAGCGATGTGAGGCCGGA
TACTCGATCAGTCCAACGATACTCCAGTAGTCCACCTTGTAGCGACAATGCCGTATAGAA
ATGTGGCGTGTTGGCAAACACCACCAGACCTCGTTCCCTGTTCGGTTTTATTTCAACCTC
CAGAGAAACACTGACGCTTGTCAATAATCTGGGATACAATTTAATGTAGGATCTCACTCC
AGTGAATAAAACGTCGGTTGGGTATAATTCTTGATCGCAGTTAATACCAGCTCTTCCATA
AGGGCAGTCACAATCGGCGCGGTCGTCGGTCGCCACCACGCACTGACCCTGACATTTAGA
GACGAGAGCGTCGCACGGGTTGCGCTCACTCGAACAAGTTGCACCATAAGAACCTTCGTT
GCAGATGCAGCCATAAGTAGCAGGCGAATGTATGCAGATCCCCCGTGGTGAGTTACAGGA
CTTGGCCGTGCATTGCGCTACTCCACACTGACCCACACCGCGACCCCCCGACACGCCGCC
GCCTGCTGCCTGACCCCCCACATCCCAAATACAGCCCCGCCAGCCGCTATGTAGAGGCAA
GTCATGGGGCAAGTTGCTGAAACCTTCTGATGGGTGACCACCAATAAAAAGGTATGGCAG
TAGCGTCATCTTGTCGTGGTTGGCGGGCGCGTTGCCGGTCGCATTGAGCCTGCCGTCCAC
GGCCAGCCCGGCGGCGCGGCCTCGGCGCCACACGCGCACCGCGTGCCCGCCGCGACGGTA
GCTCAGGGCGCGAGACGTAAACACGCGACGAGCACCATTCCCCATATTCCAAGACAGCAT
AATGTAGCCTTTGACAAATGTCACGGCCAAATGTTGGCTTTTCGAGTGATGCTTGCCGTT
CTGTCCCACAAATGCCAGTAAAGCTATCTGGTCCATATCGGGCGTTTGGAACCGAAGACG
AAGGTCGAAGCGATCTGAGTTCATAGCGGCTGGAGACAGCGGGTACACGAGGTAGGACGA
TACTCCTGTACTGATCGGTGCTAAGGATGGACGAGTTATTGCTACATTATATTCGCATAA
TATTCCGTGTTTTCCATACGGACAGAGGCAGAGAAATCCACTGCCGGGATGACGCACGCA
GCTTCCGCCTGACTGACACGGGTTGTTCTCACATACGGATACGTTGCACTGGATACCCAC
CCAACCATTAGCACAGGAACAAGTGTAACCTCCATTAGTATCTTTACATGATCCTCCATT
GAGGCAGGGCGAAGAGAGACAAGACAATGATGTACATTCTGTTACGTCACCGCCATCGAA
CGCTGAACTAAATATGTCACGAACAACACCGTTTACCATTAAATCTTTAATGCATCCCAT
AAACGGTTTTGTTTCCGAGTCTCTGATTTCAGGTGAGTTTCCTAAATATAGAGTTGCGTT
TTGATGAAGAGTTGTTATGTTCGCGACTTGTCCACCACTCATGGCTACTGTGTCGTTTAA
ACGTAATGTTGCATTACAATGCTGCTCTTTTAGATATAAATTCAGTCTTGTTTCAATTTT
CATAGGAAACCCCTTATTTACGTAAGTTTTCAGTTCACTAAGCAGCATAGTTTGGAAACC
ACAAGAGAATTTAAATTTGAGCAACCCCGAATGCATGTAGAGTTGCATATAAACCCCATT
GGCAATATCAACGAACATTATTTGACCATCCGATATCAAAGTCTTGGCGTTGAAAGCGAT
ACTGAAAGATGTACTGTTTCGTATCTTGTGAACGATGTAGGAATCGCCACTGAAAGCTGC
TGAGGTTACAGTGATCGTATCTTCACAAAATTTACCGGAATGCTTGAAATTGCAGTGGCA
TCGAAATCCATGAGGAGTATTGACACAAGTACCTTGATTGTTACAAATTGCGTCAGAACA
TTCTAGAAAAGCAGTCGTGTGAGATATACTTTCTGTGGTTGAATGTCTGTCTGATGTTGT
TTCCATTGATTCAGTAGTAACCGGTATCAAAGGTGACGGCAGCTCTGTAGTGTAATGTTC
TGTAGGAGTATCGGTAAACATCTTTTGAGTTGCTATATCCGTCTGAGGAGTTGATGTTAT
TTCAGCTATAACGTCTTTTGAAGTCGTTTGTAATTCAGTTGTTGCTAATTCTGTTGTCAA
AGGAACTGATTCTGTAGTCTCTCTAGTTAAAGGTATATAAATTGGAGTAGTATCAGTTAA
TAATGTTGTGTCCAATGAAACATTTGTTGCTATACTTGTAGTATAATCTTTGCAGTCAAT
AAGCTCAGTGGTAGTTTCGACTTTCGAATTATCAATTTCCAAAGTCACTTTGGTTTCTTC
TCGATCAATGATTTCAGTTACATCATTTGTTTCAGTAGTTACTTCTATAGTAGTAGTATC
TAACTTTTCAGTTATATTACTGCTTAACGTAGTTGCAGTGTCTGTTACAGGACTTCTACT
ATCAGTGGTTTCAGACGTCATATTTGTAATAACAATAATAGGAGTTTGATAGCCATCTGT
TGTACTAAGCCAATATGTAGTTTCGGATGTTGTTATCGAGAAATTATTCCTTTCAGTTGT
AAAATCTTCTCTTATTGATGAAGTAATAGAAAGAGTGATTTCGGGTCTTGGTGTTGGACT
GACATAGTCACAGTCAGAAGTATTATTATCTAAGATTAGACATTCACACAATGATCCAGT
CAATGTTGGTGGACATGAACATGTGAAATTATCGATTCCATCAATACAAGTTCCTCCATT
CATACATCTTGGTCCCAGTAAGCATTCGTCATATTGAAGTTCACATCGTTCCCCATGGTA
ATCGGGGACGCAATAGCAAACTCGAATACCATCTTCGACAACACACAGTGCATCATTACT
GCAAGAATTGTCGTCACAAAATTCGATTTGTACTTCGCAACTTTTTCCCGTGAATCCATA
GCTACAGGCACACATGTAATCGGCATGGATATCAATACACACTCCTCCGTTTTGGCACGG
ATTCGATTGGCATTCATCAATTTGTTCCTCGCATGTAGCACCTGCCCATCCAGAAGAGCA
TTTGCAGAAGAACTTATAGCCAGGTCCCTCAATGCACTCGGCGCCGTTGTAACACCGTAC
TTCAGTGGAGTTGCACATTGCTACATCCAGGTCACAGTGTTCTCCAGAGTATCCCGGAAC
ACATGAACACATGTACCCGTTGGTGAGGTCGATGCAGGTGCCATTGTTCAAACAAGGGTT
CGATTCACACTCGTTGAAATTGGTCTCGCAGTTATCACCTATGAATCCCTCAGGACAGGA
ACAGTTGTATGAAGCTACGCCATCGATACAGCTACCTCCGTTCAAGCAGGGACTGGACCA
GCACTCATCCCAGTTGGTTTGACACTGCACTCCAGTGTAACCATCCACACAGTAACAGGA
ATATGTACTATTAACATCGTCGATGCATATTCCGTGCAGGCAAGGGTTGCTAAGGCAAGA
TAGGCCAGCAGATACCACCCTGACCGCGGCTAACCACCACACAGCACGCAAACACGCTTT
TACTTTCTCATACATTTTTCATAAAAAAATTATAAACTGACTTTATTCATATTGATTAAA
TAAAATTGGTATTATTCAGTTAAAAGATCG
(5190 bp)

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