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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR2008c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_protein_tramtrack,_beta_isoform-like_isoform_X3_[Bombyx_mori]
Ontology
GO:0000794 C condensed nuclear chromosome
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006342 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007435 P salivary gland morphogenesis
GO:0016458 P obsolete gene silencing
GO:0016568 P chromatin organization
GO:0031208 F POZ domain binding
GO:0031519 C PcG protein complex
GO:0035167 P larval lymph gland hemopoiesis
GO:0042803 F protein homodimerization activity
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
Transcript
Level		FPKM:4.26 TPM:4.17
ORF EntryO_TrvaFAMAMG1193_complete:A_TrvaFAMAMG_TR2008c0_g1_i1
Sequence
(Nucleotide)
TGCTCGCACTTTTTATTTTTTCATAGATTTTGACATAACGCTGTGTCGAACAAACCGAAC
AATGAACGGTGCATTGTGAATTTTGTGAAGCAAACGCAAACCGTGCGACATTTTGTTGTT
TTTTTCATTGTATTGCCATGCAATTCTACATTGTTTTATACGCGTGAATCGACTCGAAGC
GATCGTAGCGTATCCGTGATGCGTATTTTCGCACAATGAAATAACAAAAATACGATTTGA
AATAAGTATACGTGGGCAGTTGTCTTGTTTGCGTTTTCAGTGATGTACCACTGCAGGGAC
GCGTAGTTGGTACTGAAAGTTGGGTAGCGGATAGTAGTACGGAGGTGTATTTCGAGGGGA
GATTGGCGTGCGTTTAGGATGGCGATGGCGGAACAGTTTTCGTTGCGATGGAACGACTTC
CACTCGAACTTGTCGCAGTCGTTTCACGCTCTGCTGGAATGCGAGGACCTGGTGGACGTG
ACTCTGGCGGCAGGGGGCCAGTACGTGCACGCTCACAAATTGATCCTCTCGGTCTGCAGC
CCTTATTTCAAAGAACTCTTCAAGATGAATCCATGCGAACATCCGATAGTGATCCTCAAA
GACGTGGAGCTTCAGGAACTACGTCAGCTTCTGCAGTTCATGTATAGGGGCGAGGTTCAC
GTTCGTCAGCAGGAGTTGTCCGGCTTCTTACATACGGCTGAGCTGCTGCAAGTTAAAGGG
TTGACTGGAGGCAGAGAGAAAAGCGAATCCCCACCGCCGGTAATGGATGACAAGCAAGCT
ACAAAGCCTAGTGTGTCGGAGCCGTCTTCTGAGAGTCAACAGGAATGGGTGCCTGGAGGT
GAAGATACCATTGCCACTGAAACCCTCGCAGAAACATCTGATAGTGCATCAGTGAAGGAG
GAAACTGTCAGGAGCCCTTTGAAAAGATTGTTGAAAAACACTCCGAATAAGAACTCAAGT
GTGAAGAAAAAGCCAAAACCCGTAAACGACAGTCCAACTCATCCCGAAAACACTGACTAT
GCATACGACAGCGAACCTCTCATCGATTTCGACAACGATTTGTTTCACAGCGTCCTGGTT
TTGCCCGAGACTAAAGAAGCAGGTTGGAACTGCAAGACAGGTGGCGTGAAATGCCCGAAC
TGCCACAGATTCTTCGCGAACCGCTACAATCTCAAGGTCCACATTCGAGACAAGCACGAC
ACACGCGAAGGGACGTTGCAATGCGACATCTGCCAGAAGAGAATGAGGAACCCATCCTGT
CTCCGCGTCCATAAATACCATCATCGCAAGCAGGCTGCCTACCTCGCGCAAATAACGACC
CAGGGTGATCAAATGAACGTTCAAAACATGGTCGGGGCTAAATGGCGCGCCGATCCCGGA
ATGGGACCTGATTACAGGGAATTCGATAATTCTCAAAACGCCGTGAGTAACAAATGGCGC
AGTGAAACAATGCTCGCTGCTGATTTCAGGGAATTCGACAGCAGTCCGCGTGAAACTACT
CCGGGTCCAAAAACGCCGTCAAATCAAACACCCGACAAATACCAAGCAACGACCCCAGAA
CAATCGTCAAAATCGGAAAACGAGGACACGGTATGAACGAACAAAACAAACAAACAAAAA
TGACATGCAATATATTTAAATTGAGTACTTACGGAGAGCTTATGTTTTAGTAATAAAGAT
GATATTTTGAAGAAAATATAAGTATAAATTAACGATACTCGAATTTAAATGCGTTACATG
TACATTTTAAAACGATATGAGCGTATAATGTATGTATATTCAATGACACAAAACTTTGAT
ACATTTCAAGAATGGACTAAAATTGACATATAAAAATAAATAAGGTTTTTAAGTGAATAA
AGGCAGATTAAGCGACGTAATTTGCGAATTGGAAAAATGTAACATGATTGTTTTAGAAAT
GTCATTGCGTAATAAATAAAATGGTCTGTCCTTGAAATGTAAACGATAAAACATTTTTGA
TATAGTTTTCAATACTCTAATGAAGAGATTATTTTTTTTAGTAATCTGACTTGTGTACAA
ATTTAGCTGTACGCATTTACGTGTATGTATGCATTCCATTACAGAATATCCAAAGACTGA
AGTAATTCGAACAATTTTTATACATTTTATATACAAAAATGCCTAAGAATATAATATATT
ATTGGCAAATATGTTTTTTTTTTTTGTTTTTTCACGCGATTTCATTTGCATGCTCTCTGG
TGAAGGTTTATCATATTTTCATAATATTATTACGATTAAAAAAATACATATTTGTCAATA
ATTTGACAGTGAATTCTGTCACGAGTAATATTTCGATATTGCATATTCGGAGAGTACAAT
TTTTTTTTACTTAAATTAGGCAGCTGTGTAATTTGAGATTGTAATTTAAAATGTTGCCAT
TATTTAAAAAACGTACAAAGATTACGTCGCATGATATATTTTTTATAATTGTCAATATTA
TGATTGTGTTGTGTGATGGTGAATAGTATAATCACCTCAATGTAGTAAGCATAACCTAAC
AGTACAAAATACGATATTGTTTTATTCATCTATAAATGGATGGATCAATTCGAGAAGGCA
CTAAGTCTTGTGACTTGAAAAAAATGCTTTTACTGTCAAAATCTCTTATAAAGTGGAAGA
GTCAAGACGGTAGAATGAAAGGATGTTTTATAGTAACAACTAGCCGCCCGCGCAACTTCG
TAAAAAAAAAATTAGGGTTGGACTA
(2725 bp)

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