SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR20083c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_polypeptide_N-acetylgalactosaminyltransferase_5_[Amyelois_transitella]
Ontology
GO:0000139 C Golgi membrane
GO:0004653 F polypeptide N-acetylgalactosaminyltransferase activity
GO:0005794 C Golgi apparatus
GO:0005795 C Golgi stack
GO:0006486 P protein glycosylation
GO:0009312 P oligosaccharide biosynthetic process
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030246 F carbohydrate binding
GO:0046872 F metal ion binding
Transcript
Level		FPKM:1.11 TPM:1.08
ORF EntryO_TrvaFAMAMG23577_complete:A_TrvaFAMAMG_TR20083c0_g1_i1
Sequence
(Nucleotide)
TTAAATACTACAGAAAAATAAATATTAAGACAAGAATAAATAATATTATGTAAATAATGA
AATGATAAATGAACAAAGAATTAAAGTAAATATCAAAGCAGGCAAACGATAGTACATGCA
GACAGTTACTGTTAAATGCAGTCGCAATGTTAATGTTAAAACAAGCTAATTTGTTAATGA
ACTTTCACAACACTTCAACTGATGGTTAGTGTAATTCCCAAGCCACAACAAAACTTTACC
GTATCTGTGTTGCCGACGTTACAGACCATATTTACTTTTACATTACTTTTTAAACGGACA
TACGAATTAATAATGTAGCTATGTCTTTCGACTGCTAAATATCAGTCATAACAAATTTAA
TGTCAATCACACACAAAATGCTTTACATGCAGCAGTCAGTATAAAAGTGTCCTAACCTAA
AAATGTGTCACTTTTGATCATTTAAATCGCCACAACACATTTTATTGATAGGAAACATGT
CATAGTTATTTTAGTATTGATTGTTGATCAGACAGTGTAAAGATCGGCAACACAGACAGT
CGACAAGTCCGGTATCGAACCTGGGTTCATGGCGTAATAGAAATCTCTCCACTCGTCCAT
CCAGACGTCGGCGACCCGGGCCGCGTTGTGCAACACTACGTTCTGTACCCCGCCCGGGAA
CGAGTACGGCGACTTGTCCCGGAACACGTGGCCCACGTGCGAGCACGGCACGATCTCCAG
CCGCCCGCCGCACTGCCACACCCTGAAGCTCATTTCGAGGTTTTCTCCGCCCCAGATGTC
CATGCCCTCGTCGTAGGAGCCGATTTTGTAGAAGTAATCCTTGTCTATGGCGAAGAGACC
GCCCGCCATTGTGGGTGTCCGGAGTGGGGCGGTGCGATCGCCGCCACGACGCGACATCTC
ACGTTCCGGAACTCGATACCACCTAAAGTTGAGTTTCCAATTAAAACCTCCCCATGTCAT
ATCAGAAGCTTGTATGTATTCAAATGTCGTGTCCGAAATTACATCAATAATTGGACACAC
AACTGTAGTTCTGTCTTCAACTATACGGGCTAATAACGGCTCTAACCATCCCTCTGTACA
TTCACAGTGTGCGTCTAGAAAGGTGATGACGTCACCGAGCACGTGCTTCGCCCCGAGAAG
CCTCGCCCGGATCAAACCAGACCGTTTCTCCGTACGGAAGAGTCGCGTCGACACGGGCAA
TGTCTTTATGTAGTCTTCTAACTTCTTATCTAAGTGTTCTTTTTCACTGGCGTCGTCGAC
GAGAATAATTTCTTTGAGCAGCGCTCTCGGCGATCTGTTAATGGTGCTCCATATTGTTCT
TATTAAAGTGGACCAAGCCTCGTTGTGGAACACTATCACGACGCTCGTTGTTGGCATCAG
ATCTGGATACGGCTTGTCTTTGCATTTTTCGAATCTGACGTCGGTCAGTGACCTGTTGAG
TGAGATCATGTCGCTGGCCAATAGATTGAATTGATTCTCTTGGAATTTATCTAACATCAA
CTTCTCCTGTTCTATTGGAATGTTCACAGCCTTACCCAGTTCACCGGGTGATTCTCCTTG
AGGTTTCACAGAAGGTGCTGGCTTCCACCTCTTTAGTCTTGATCTTGGATACTGGGACAG
TATCACACCATCGTCCTGGACATCCTGTGCTATTTCATTCTCTTCAAGATTTGTGTCATC
ATCATCAATATTATTATCCTGATGTAGTGCCGCAGCAATTGCAGCTTTCTTCCCTCTGTA
TTCTTCTCTCTCAACCGAAATTTCACTAGCAGCAGTCTTCTTGTTGCATCCGTCACCGAA
GCAGTCCGAGTACATCGCCAGCAGCATCACATCGACCAGCAGCCACGCCAAGGACGTCAG
CAGGATAATACGACACGTGTGAATTCTTATTTTACTTCGGAACATTTTAGCGATTGCACT
ACAGGTCACTGGCTCATGACAACTTCAATGCACAAATGAAAGGATTGTACTGACGACTGT
TGCTTCTATGTTACGCGACTACGGCTACTTATGTTGTCAAGAGTTTGAAAATTAATAACT
CGCGACAACCGCAAATCTAATTAATTTGATTCCATTGACAAAAGAACACTCGCTAAAACT
TATTTCCCGAACGTTGACCGAAACGATCGGTTCGGCATGAAAAAGACAAAAAAGCGAAAG
CTAAAAAGTTG
(2171 bp)

- SilkBase 1999-2023 -