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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR20082c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC106711740_isoform_X1_[Papilio_machaon]
Ontology
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0005622 C intracellular anatomical structure
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019012 C virion component
GO:0030430 C host cell cytoplasm
GO:0042025 C host cell nucleus
GO:0046718 P viral entry into host cell
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0075713 P establishment of integrated proviral latency
GO:0075732 P viral penetration into host nucleus
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
Transcript
Level		FPKM:52.65 TPM:51.58
ORF EntryO_TrvaFAMAMG23576_complete:A_TrvaFAMAMG_TR20082c0_g1_i1
Sequence
(Nucleotide)
TTGAAGGCGGAGTCACATAGTCGCAACATCCACCCCCCCCTCGAAGGTTGTAGATCTTCG
TGTAGTCTGAGGCTCTTCGTCGAGAAGAGGGCATAAATTGTGGACTGCTCGACGAAAGAC
CCCCCTTGTGGTTTTCACGTCGACTACTCTCGTGACTCCGTCAGGACCCGGGAACAGTTT
ATCGACGCGCGCCATCCGCCATTTTAGTGGTGGCGTGTTTGGTTCTCGGATAATCACCAA
GTCGCCCTCCAGAAGACCCCGCTGTGAGACCCGCCACTTTGTCCGTTGTTGGAGCTCGCT
CAAATACTCCTCTCTCCACCGATTCCAGAAATGTTGCCGCAGTTTTTCTACAGAGCGGTA
TCGGTCCAGCCGCCCGTGTGGTGTTTCCAACAATCTCTCCGAAGGAAGCGAATGAAAGGA
TCTGCCGATCAAGAAGTGCGCTGGCGTCAAAGGAGAAAAGTCGTTAGGGTCGGAGGAGAG
AGGGGTTAGAGGCCTGGAGTTGAGGATAGCCTCAATTTGTGTGAACAGCGTATACAACTC
CTCATAAGTTAGATGTTTGTCTTTTAAAATACGAGTTGTATGGTATTTGGCCGACTTTAC
ACCTGCCTCCCATAACCCACCGAAGTGGGGTGAATAGGCAGGAGAAAAATGAAATTTAAT
ACTTTCACCGGCTGCAAATTCCGATAGTTTTGCGCTGCTCGACTTAATAAAATGACTCAG
TTCATTATTTGCACCCACAAAATTAGTCCCGTTATCGCTATAGAGTTCAAGTGGCTTTCC
CCGCCGGGATATGAAACGTCTAAGCGCACAGATAAAAACCTCGGTTGTTAGGTCACTCGC
GACCTCTAAATGTACAGCTTTAGTAGCAAAACAAATAAATAAACACATGTAATGCTTGAT
AATTCGACAACCGCGACCTTTGCGATCTGCGACATAAAATGGCCCGGCGAAATCGACTCC
ACTTACTTGGAAAGGGAGACAAGGAATGACTCTAGATGCAGGTAAGGTGCCCATTAATGG
TTTTAGACATTTCGCTTTGAGTATTTTACATGTATTACAATTATTCACAGTGGTTCTGGC
TAAAATTCGACCCTTAATTGGCCAAAATTCATTTCGAATGATATTGAGCAGAACTTGTGG
TCCAGCATGTAATAGTTGTTTGTGCTTGTAATTAAACAGTAATTGTGTAAAATTGTGTTT
GTTGTGTAATAAGATTGGGTGCTTTTTATTGTAGGAAGTATCCGAGTTTTGAATTCTTCC
GCCAACGCGTAGGATGCCTTGCTTGTCCAAAAATGGACTGAGGGATAGAATAGAGCAAGT
TGACGGCAAGTACTGTCCATCTTCTAGTACTTTAATTTCTTTGGCAAAACACTCTTTTTG
ATGTGACTTAACCAAAATGTTAAGTGAATTTTCAAGTTCTTTAGTAGAAAGAGGACCTGT
CAGTTTAGATTTACACCTTTTAATATTATTGATAAACCGTAGAACGTAGGCTATACATTT
TTGCATAAGAGTAAAATTTGAATATCTATCAAAATCTAAAATTGTAAATTTATTTAGTAG
TGATAGTTGTAATGATGATTTAGTAGTTGTGTTGTTTAGAGAGTAAGTAGTTTGTAGTTT
AGTAGTAGGTTTGTATATAGTTTGTGATTTAGTGTTAGTTTTCAATTCGGGTAATTCGGA
ATGGGTTTTGTGTGCATTAAATTTTGGCCAGTTGCTTGAATTTTCATGGAGAAACGAAGG
ACCGTCCCACCACAATGTAGCTGATTGAATCAGTTTAGGGTTCATACCTCGCGAAGCTAG
GTCGGCTGGATTACGATCCCCTGGTACGTGTCTCCACGAGTCAGTGGATGTTAAAGTTTG
GATTTCGGCTATCCGGTTTGAAACAAACGGCTGTAGTTGACAGGACTCGGTTAGCAACCA
ACAAAGAACAATGGTTGAGTCTGTCCAATAGAATATATTATCTACTTTGCAGCGTAACGC
TTTAAGTACAGCAGTACTTAAACGAGCTGACAGTAGCGCCCCGCACAATTCGAGCCTTGG
TATGGTTGTCGATTTCAGAGGAGCTACTTTGGTTTTTGCACAAAGTAGCCTCACCATAAC
ATGACCCGCCCTATCAACAGATCTCAAATAAACCGTAGCAGCATATGCGACTTGTGAAGC
ATCTGAGAAGGAATGTAATTCTATATTTATTGGTTCGTTAATAAGGACTCGTCTTGGAAT
TTCTATTTGAGACACTGCCTGTAAATTTGTAATAAAATTTTGCCATTCCGAATTCAATTC
TGAATCCACCGGATCATCCCAATCTAGTTTCGATAGCCATAATTTTTGCAGAATTATTTT
GGGTGTAATAGTACACACACTGAGTAAGCCTAATGGGTCAAATAATTTTGCCGAGTTTGA
AAGAATAATCCTTTTCGTAGCGTTAATATTGTTTTTTAAATTTACCGGGAATCGGAAAAT
ATCCTTTGTTGGATCCCATTTGAGACCCAAAACAGTAGACTCTGAACTAAAATCTAAATT
CTTCTGATTAGAACAACTTGTTTGAGCGCTTAAAGCAGATGGTAAATTACTTCGCCATTT
CCTTAAGGGAAGGCAGGCTTCATTTAAGGTTGCAGAGACTGATGAAATTATTTGATTTAA
CTCTGCCTCTGTTTCGCTTCCGGACAACAAATCATCTACGTAAAAATCTTTCTCAATTAC
TTGCGACGTTAGTGGATCATTACATTCTCGTGCTAATTGAACTAAACACCTAGTGCTCAA
GAAGGGACTTGATGCCATTCCGTAAGTGAGTGTGTTTAGTCTGAATGTCTGAATATCTTG
TTGAGGATCGTCGCGCCATAAAATTAATTGAAGATGACTTTGATTTGGTTCTATTAATAT
CTGTCGATACATTTTTTCGACATCGGCAGATATCACGAATCTATGCTGCCTGTACCTGAG
TAAAATTGTAAATAAATCATCTTGTACTACAGGCCCAACATATTGGATGTCGTTAAGCGA
TACACCCGATGAAGTTTTAGCAGAAGCGTCGAATACTACCCTAAGCTTAGTAGTTTCACT
AGTCTCGCGTAGAACGGCATGATGAGGAAGGTAGCACCCGATCTCTGGTTTCGGTATTTT
TGTCATGTGTCCTAATCTTTCGTATTCATTTATGAACTCGCGATACTGCATTTTAAGAAT
AGGTTTAGATTTTAGTTTTTTCTCAAGTTGTAATAATCTTTTTTCGGCAATATGGTATGA
TTCACCCAGGGCACTAGTCGAATGTTTAAAAGGTATTTGCACACAAAATCTACCATCCGC
AATGCGATGAGTAGTTTCGTTAAATAATTTTTCGCAATAATTGTCTTTATTAGTATTTAA
TTTGTCTGATGGTATTTCTTCAAGCTCCCAAAATTTTGCTAGTTGTATTTTAATTTGTTG
TGAAAAGTTACATTGTAGTTTAGAATTTGTATTTATATTATAAGATCCTAAAGGGCCTGC
CACTATCCAACCTAAATGTGTATCCTGGAGGATCGGTTTTTGGGGGCCTAAAATTATTTT
GTCTACTAGGAGTAGCTCCCAAAAAACATCAGCTCCAAGTAATAAATCAATTTCCGAAGG
TTGGTTGAATTGAGGATCAGCAAGTTGTACATTTTTTGGAATGCCTAAATTTTTAATACG
CACTGCAGCATGAGGTAAGTTATCCGTGATTTGAGGTAAAATAAAACATTTTATAGGTAA
GTTAAAAGTATTATACACTGAATGTAAACGTAGGTTACAATAATCAGTTACATTGACCAC
TATATTCCCTAATCCACTTATACTTTGATATTTGTCCTTTCTTTTAGAAATACCAATTTT
ATTTTGAGCCTTAGTAGTGATGAAAGACGTTTGACTACCACAGTCTAGCAAAGCCCTTAG
TATAAATGATTCGCCATTGTTTGTCACCTTGACCAACGCCGTAGATAGCAGGACTTGATT
GGTGGAGACAGCAGACATTGAAACCGAAGATGAGGGACTAGATGCTGCGGAGTGGACTAC
AGGATCAGGTAAGTTAGTATTTTTATTGTTAGTTGTAGATGTAGTAGCTAGAGGTAGTTT
ATTTTCGCTTTGTTGTATATTTTGCGTGCTGTATTGCCTGTGTAATAGAGTGTTGTGTTT
TTTATGACAGATTCTACAACCGCCCAGTCTGCATTGATAGGGTTGATGACCCTTGCGAAA
ACAAACCCCGCATAATTTTAATGATGCAATTTTGGCAATTCTTTCGTGAACGGGTAACGA
TCTAAATGTTGAACATTCGAATATTTTATGATGTTGTTTGCAAATTGCACACGGTGTGCC
TGGTGGTAGCTCGAGGGATGAAGAAATAAAAGACTTGGCGTTAGGAAGACTGAAGCGTTT
TTCAGAATATTTAGAAGCTCTGTTAGTAATAAGTGTTTCTAAGATAGTAGCACGTTGTCT
TAAAAAACAATAAAAATCTTCTAAAGTAATTATGTCTTTTCCGCTTCTAAATTCCTCCCA
TTTCCCAGCAGTAACAGAGTCTAATTTCGTCGAGGCCATGTAAATAATAAGTGTGTCCCA
CTTGTCTACCGGTTCACCTAAACAAGTCAAGGCACTTAAATTTTTAGACAATTCGTCAAT
CAAGTTACGAAGACCTTGATGACTTTCTTTCGGTAACGTTTCAATTGAAAATATACATTT
AATGTGTTCATTTATTAGCAGACGCTTATTGTCGTATCGTTCGCATAGGAGGTTCCAAGC
TATGTCGTAATTGTCGGAAGACATAGCGACTGACCCAACAACCGAAGATGCCGCACCCTC
TAAATACGACTTTAAATAATGGAATTTACTAATGCTATCGAGATTGTCATTATTGTGTAT
CAACGATAAATACATGTCCCTAAAGGAAAGCCACTTGCTAGAAGTACCGCTAAAGGAAGG
TATATTAAGGGCTGGCAGTTTCAAATTGTTATTCAATCGAAAACGGCTGGATGACGACAT
TTGTTCTTTTTTATTAGTGCTTTGGAAAAAATCTAAGAGTGACTGACCTTGAGCAATTAG
CGTAAAGAAGAGATTTTCAGTTACTTCGCGTTCCTTGAACTGGTTCGCATCGTCCTCATC
CAACAGCTCGATTTTCGACTGAATGTCCTCAAAATTGGAGGATAAATCATTTAACTTAGC
GAGTCTGATTCTAAGTTCGTTTACCTCAACATCAGATGTTTCTTTTGTTTCTAATAGCGG
TTTTAGATATTTTTGGAAAAGTGTCAGCCTGGCCCTAATATGACCCCTTTGCTTAGTTAG
ATCTTTTAAATCAGACATAGTTAGTGCGTAATAGTAATTAAATAGGTTATATGTAGTTTA
AAATTGTAATGTATAATGTGTGCAAACAAATGAAATGATGAATACGTTACACGATTCTCG
AGCGATGAGCAAACAACAAACCGGTTCTGCAGCCGGCGCTTAGCCGATGCGCGGTGACTG
GCACGAGATGCACCGTCCGATCGCCTGGAATGTTCGGCAAACTAATAAAGTAATCGTTTT
AGGTAATAGTTAATAAACTGTATATTTGTCGTAATCAATAAATGGGATAGTTGTGAAAAT
TTACTTGAGATTTAAAATGAAATAGTGAAAAAATTAAAATGTAAATTTATTATTTGACCC
TTGTTTAATAAATAGTTTTGATTATATACTTCGTTTGAATCATTAACTGCATATAATTAT
GGAACAATGTAATATGTTACGATGGGTAGGTATCTATAGTAAAATTGCAAGAAATTGTTT
GATTCGTTATATAACACTGTTCACACAAATTGAATTGAACGGATCGGATATTAATAAGGA
AACGCACTTCCCTCGGAAAATGTGGCTGCAGCAGTTGGCTGGCTGATTCCAGGAAGCTTT
TTCTGTTGATGCGTTGGCCTTTTGCTTCGTTGTCGATCACGTCGGGGTCACCATATGTCG
ACGCCGCTGGTTGGGTTGCTTCGGTCGGTGTGAAATGAAGTACTACTATCTTGTGTTTAC
AGTAGTATTTATTTATAGTTAGGTCGTTTACAATGAAATGCAATATGCTATGACTTGAAG
TTAGATAATAGATTAAATATGCGTGTTCTCGACCGTGTCCGCAGCGCGACGACGGCCGGT
GGTTCCCGCTGCCCTTCGCCTCTCGTGGTAGCGGTGGTGGGATGTTGAAGGCGGAGTCAC
ATAGTCGCAACATCCACCCCCCCCTCGAAGGTTGTAGATCTTCGTGTAGTCTGAGGCTCT
TCGTCGAGAAGAGGGCATAAATTGTGGACTGCTCGACGAAAGACCCCCCTTGTGGTTTTC
ACGTCGACTACTCTCGTGACTCCGTCAGGACCCGGGAACAGTTTATCGACGCGCGCCATC
CGCCATTTTAGTGGTGGCGTGTTTGGTTCTCGGATAATCACCAAGTCGCCCTCCAGAAGA
CCCCGCTGTGAGACCCGCCACTTTGTCCGTTGTTGGAGCTCGCTCAAATACTCCTCTCTC
CACCGATTCCAGAAATGTTGCCGCAGTTTTTCTACAGAGCGGTATCGGTCCAGCCGCCCG
TGTGGTGTTTCCAACAATCTCTCCGAAGGAAGCGAATGAAAGGATCTGCCGATCAAGAAG
TGCGCTGGCGTCAAAGGAGAAAAGTCGTTAGGGTCGGAGGAGAGAGGGGTTAGAGGCCTG
GAGTTGAGGATAGCCTCAATTTGTGTGAACAGCGTATACAACTCCTCATAAGTTAGATGT
TTGTCTTTTAAAATACGAGTTGTATGGTATTTGGCCGACTTTACACCTGCCTCCCATAAC
CCACC
(6785 bp)

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