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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR20075c0_g1_i4
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_bmp-2_protein_isoform_X1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007067 P mitotic cell cycle
GO:0007303 P cytoplasmic transport, nurse cell to oocyte
GO:0007562 P eclosion
GO:0007623 P circadian rhythm
GO:0008062 P eclosion rhythm
GO:0008104 P protein localization
GO:0008270 F zinc ion binding
GO:0009790 P embryo development
GO:0030036 P actin cytoskeleton organization
GO:0040011 P locomotion
GO:0045475 P locomotor rhythm
GO:0045804 P negative regulation of eclosion
GO:0045995 P regulation of embryonic development
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:8.36 TPM:8.19
ORF EntryO_TrvaFAMAMG23552_complete:A_TrvaFAMAMG_TR20075c0_g1_i4
Sequence
(Nucleotide)
TTTTTTTTTTTTTATACAAAACATTTTATTTTTCGCTCTCAAAATCCCTTCCAATCGAAA
TCGACGCGAATCTGAAGAGACTCCTGATTTAATTCTTGTCCAAACCCAGGACAGATTTCG
TTTCATCCCGGCACCCATTCCCTGTAAACATAAAATACAATTACCTCTCAAACACAACAA
GAAATCTTCGAAATCGAAGCAAATCCGAAAAAAAAACGTCGATATCAACAAAAACTTTAA
CTTTACGTCTTTACGCTTCGATGTAACTCGCAATAATGTAATCCTCAAAATGTAACGTCA
ACGTACGTGTTTACTCGTATATTCCGTTATGAACGCAGAAGGTAACGCTTCGTTGTCCGT
ACTTACTATTGTTAATATTGTCCGTGGTCTTCCTCTGTCGCCGCCTACATAGTACGGTCG
CCTCATGGCATCGGAACGCATCGCCGCCGGTACGTAGATCCGCTACTAACTATCTGAAAG
GACTCTGGGACGCACAACTAGCATAGCCGACGCCGTTAGTCACATTAGATTACAGAGCAT
TCAAACGTTCGCTGTATACGCATAGCGAGCCTTTATCGATACAACACATTCCCGATTATA
TTGGTCAAATCGAAATCCCGATTTTGAACAGACGAATGACTTAATTCAGGGACTGTAACT
TAGTTTCCAGATAATTTCATCGATTTACTGATATCGCGGTTGCCTAAAGTTTGGTTTAAC
AGAAGCTTTCCACTGTCGATTCCAGGACATCGCATTACACCTTTACGCTTGCGCAATCTT
CAGCTATAAACTTAGTAATATCGTGAGTGAAGTCGTTATGGTTTAACTCAAGTCACGCGA
GAATTGAAGACTATCCTTTTCCAATGTTGAATTGTTTACCTTTTACCTCCTTCAGTAAGT
TTTCAAAGATAATATAATAGTTCTTTTTGTAAAATATAACAACAGTAGATATAAACGTAA
AGCGCGAGGCATCGACACGTTTATCGCGAAACCGTAAAAAGAAATTCGTAAATATTTATA
TTGTGTTGTTTCGTTGCGATAAAGGCTCTATTTCCGCACCGTTTTACCTTCGAGAACGTA
ATATTTTCAATACTAATGTGCTCTGTAATCCGTTTAATAAAGCAGAAATGTGGGATGCGT
CCTTCGACTTAATTGTTATCAAACGTTTTGCTGATATAATCATATCCAACAAATTCTGGT
ATCAGAAGCAATCATTTATTCCATTTCAAATGGATTTTAGAGACAAATTATAGCAATGGT
CGTTTATAATACAGAAAATTATTTGAACGCATCCCTAATATCTTGTTATGGATAGTTTCA
AGTAGTACAATTAAATGCATTTAACCACAACCAATAAAGCGATGAAGAAGAATAACGGGG
AACTGGCAGCATGCAGAATTTCAGGGTTGTTTGAAGTGAAAACCACCGATTCATTAACGA
TTTTAATTTCCATAGACATAATACATCGACATAATACTTTGATACACGTCTTGAGACGAC
TAATCTATCGTGTTTTACGTAAACAACGTGTCACGTCAACAATATTAGGTACAAAATGAA
TAGGATACGAGTTGATTGTTCTCATTTATTGTATTTATAAAACGATTGACATAATTGTAA
TAAACTTATAGGCTAGTGGTGTGGTTCGCTCGTGGTGCCCGCTAATACCGTCGCATGCCG
ACTCCGCCCGACATGTCTCGACCTCGCGGCGCTCCGCCCCCGCGTCCCAATGGAGGTTGC
ATGTACTGTGGTGCGTAGTGATCTCGCTCATAACCACCGACAGCAGGGGCTGGGCCTCCA
CGACCGGAGTAGATGGGTGCAGGTGATCGTCTACTGTACATGTCTCCGTTGGGTATGTGG
TGTGCGGGTCTCGGTCGCTCGTACTGCGCGCGCTCGTCGTAGTGCCGGTCGTCGTACAGC
GGCTCCTCGTACCGGCGCGTGCTCTCCACCACCGAGATGTGGTTCTGGTATCTGTCGTCG
GCGTAGGCGGGCGCCGGCGGCGGGTACGCGTCCCTCGGCCCGCGGTCCATCAGCGCGAAC
CCACGGCGGTCCTCGCCGTACGCGTACCGGTCGTCATAGGGCGCCGCCGGGGGACCTCGG
TCGTAGCCGCGCACCGGGCCGCCTCGGTCTCGCATGTAGGGCGCGTCACGAGGCGGCGGT
CCGTGCCTCACGGGACCCGGCCCACCGCCTCGCCTGTCCATCCCGCCGCGCATGGAGCCC
CGGCCGCCGCGACCGCCACCTCTCTGCCCGCGCTCCTTGATCCGGCCGCGCTCTACGGAG
ATCACGCCACCGTTGAATGTTGAGTTGTGAAGCGCGCGAATAGCCGCGGCCGCTTGCTCC
TCTGTTTGCATGTGTACGAAACCGCATCTGTTCATTATATCACACTCAGTGACGACACCG
TAGCGTTCGAATAGTTTTCTTAGATCCTCTGGTTTAGAACCCTGAGGCAGGCTGCCGACG
AACACCTTCGTTTGCGGCACCATGATCACTGATTTATATCACTAGTCACTGTTCACAACC
TAGATAACTTCATAAATATCACTGTATCATTGAAAATAATTGATGAAACACAAAAACGAA
CGCTCAATGTCAATTCACCGACGCAAATAAAATAAAATGGCTACCGGATGCTCAATGATT
CGG
(2643 bp)

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