SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR19979c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101741849_[Bombyx_mori]
Ontology
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006139 P nucleobase-containing compound metabolic process
GO:0008408 F 3'-5' exonuclease activity
GO:0031047 P gene silencing by RNA
GO:0034587 P piRNA metabolic process
GO:0042803 F protein homodimerization activity
GO:0043186 C P granule
GO:0051321 P meiotic cell cycle
GO:1990923 C PET complex
Transcript
Level		FPKM:18.79 TPM:18.41
ORF EntryO_TrvaFAMAMG23538_complete:A_TrvaFAMAMG_TR19979c0_g1_i1
Sequence
(Nucleotide)
TTTTTTTTTTTTTTTTTTTTTTTTGTGTAAATAATAATTTACATTTTATTTGTATTAAAC
ATGAACAATGCGCAAATTATTTTGCTAACAATTTGCAGTTACTTAAGTTGTTATAAAAAT
TGCATATTACATTATGCTGGTAGTATACTCCTATTATTATGTTAGGATAAATAACAGAAA
GTGTATTATGCTTAAAATGACTAAAGAAATGCTCCTTAAAACATTATTATAAATATTAGT
GGCACTGATTTAACTACAAAAAACTTATTATGCAATAAAGGTATTATTTTCGTAAATTTT
TCAAAACGTGCATTCCATAAGGCACATAAAAACTTTTCCTTGATCAAAATCATGCGTAAA
AATGGCGCCAAAAAGAAAAATAAAATTGCATTATCTGCTTGTTTGAAGTTGTATAAAATA
TAATATCAGTGCATTCCATAGAACTAAAAAAAATAGAAAAACTAAAACTGGTACAATACT
GATAAATAATACATGGAAGGAAATAAAAAATATGCAATAACAACTTTGCCGAACAAAGAA
GCGAAAAGCAATAAAGAATATTATTATGTTACTTATAAGTAATTTGTTTTAACATTTTAT
ATAAACTATTCGAAGATTTGATAACATGTAGAAACTTTTTATTTAATGGCTGATCATAAA
AATCCTTACACATTAAATCACCAGCCTGTTTTTAACAAATACCTATAAAAACTAGGTAAG
TAGTTATATCAAAAGCGGGTAATTGACAAAATAATGATTAAAGTAAAAATAATCACTATA
ATAGTGAATAAATTAGTATTATCTAAAAAAAAGTGTAAATAGCTTCCTCTAGTGGTAATT
TCTGTGTAATAAACACTAAAATGTGACACGAAATAACCATCTAAATATGAAAAAACTACC
TAAAATTCGTGTAAAAATTTCTACTAGTTAAAATTTTCAAGGCGACGTCGGATATGACTT
GAAGGCACAAAATGTTAACATCTACAACCATATCGGTTATCACATCACAAAATGTTTAAT
TGCTCTTTCTAACCTACAAATCTCTCTCAGTTATCTACGTAACAAAAAATGACTGATATA
ATCCAAGCACCACAACTACAAATATAAAATTTCATTTATTAACTTTAACCCTATAACCTT
TTTAGAATTTAAATTTTAGATAAACGTTCTTAAAATTCCTAAACTTACAAAATATATCTA
CTAGATATATTTAATTATAAAAGTTACTGTATCTATACACCTATTATTGCCATTTTATGT
TCAATATCGTTCGTTACTCGTGAACATTAAACAATATAAATAAATAAGTAGGTATATACA
AGTTAGTTGCGTATGCGAACGCTCAATCATGATTATAATTCGAAAAACGAAAAGATTATG
CAAGCTGAGTTTATCTTATTTACAAAAGATCTAGATAAAGGCCTTGAAATCTATCACATA
CAGATTTGGGATGCTTAACGGGCAATAGCCGAAAATAAATATAAAAATATGTATATCTAC
TACATCCAGCAAATACTGTCATTTCCTGTTCAAGGAATTGAGTAGCTGTTTTGTATTTAA
TAACAGTTGCATTTATTCGAGTGTATACGTTTGTGTTCGCTCAAATGAACACCTCGCGTT
GGCGTTTATACACCTCGTAAAGCATGACCTCACAATACGTTCGAACTATTTCATCTCAGA
AACGCACCGTTTACCCGACAGGGTTTAAGGTTTTAAATAAGAACTTAACAACTACTAAAT
AAAAACATCACAAAAAAAAAGATAAAAATGAGTTTGCAACTAAAATGTGGCACTCAGAAA
AATGGAAGTATTATGAAAACCTGAGCGTCATCAAGATACATTATTAATGCCGATCCTCTT
GCTCATCGGGGACGCATCGAGCACCCTCTCGGTAGCTTTGTCCTCCTCCCTAAAGTGGAT
TCTTGTGATGACTATATCACCAGTGCTGAGAGTTTGTGAGCCAATCTCAGATTTTTTTGT
ATCATTGAGATCATTGCACTTACCGTCTCCAAAACCAGCATTATGACATTTGCAGCAACA
ATTCTTGCTTTCCGTGTCTCCCATGTTCAAAATTTGGCTAAGGTTGGACCAATCCTTGTT
TTTGAGCAGGGGTAAAGTTTGTTCCATTGTTTGAGAAAACTTTTCCTCTAGTTCACCACT
AAGTGGAGCTACTGCAGATAAGATAGCTTCCAAGCGATTTATTTTCTCCACTTTATCCAT
GCTAGTGTCAGAGAGTATTTCATCCATCATCTGCATGGACTCTGTGAGACTAGGAGGCTG
TGTGGAATGTGGTGACGAGATAGGGTCAGAAGGGTTAGACTCCAAACTGGCCATCTCATT
CTCCCTGTCATCATCATCTGAATCTGAATCTCTGTCTTGTCCTATCGCCTCCAATTTCTC
TAATTTCTTAGATATTTTGTGACAACCCTTCAACTTCTCCTTTTCTTCTTCAGTGAGTTC
TAAATATCTGAGCAATCTTATCTCTCTATTGCTCAACACTATATTTTTAGTGCTCTCTGC
TAATTTTAATTTTAACTCACCAACTTCTGTGTTTATTTTTCTCTGTCTCTTGCGAAGTTT
TACCTCTGTTGGTTGGATGTGCATAAAGACCTGCTCATTGCTTAGTTCTTCAAAAAGCTG
TTGATTTTCAGGTTTAATATTAGAAGACATGTAGGAGTATATTGCAGGGTTTACCAAAGA
CAGTACATCAGAAGCTGCATATATGATCATGTCTTTTGTGAGGGGTCGTCTTGCCCAGTA
CCTCTGATCTCTACGGTACAGATTCTTCAGTTGTTCTTTCATGGGGTTCATCGGAGCGTT
GTATAGTTCACACAGAGCATTCAGACTAAGATTTTTAACTTTGTAAACAGGCACTCCTTG
TTGTTGTAATTGTAATACAGCGTGGGCTGCCTGTGTATCAAACACATTCTTTAGTGTTAT
CTCAAACTGGTTGTACAAATTAACTGAATCATTTCTGCAGTCATGAATAATTTTAGTAAC
ATTTTCGCTTTCTAATAGCTCTTTAATTTTACCCTCAATAATCATGCCTGGGCAAGTCAT
TATGTCTAACGTGTACACTTCACCATTCAGTGTGGCTATTTGACACAATGTGAGCACTCC
TTTGAGGCCCAAGTTGATTCCTTCACAATCAAAGGAAACTATATTCTTTGTGTTGCGCTT
AGGGGTCATAATGCTGTCCATCAATGTTGCACATTCTCTAACACTGGTTATAACTGTAGT
GCACTGTAGAACTTTTTGCCTCCACGCTTCACCAACCACAGTGTTTCTCAAACTTGGAGT
ACCATTCATTTCTTCAGAACCTCGTGAGTTCAAATGATTGTTTACCCTATCTCTGACCAT
GTTTTCAGCTAAATTCTTAATGACAATAGAGTTTATTCTTTGTTTGAGAGTTTGGTTAGC
AATGTTGGACTGTGGGCCGCGGGGAGATTCTATGGGACTGAGTATTCTGTTGGCCGGGCT
CTGCTTGCCGTCCGAGGGAGTGGGACTCACCACTGTGGGCGCCGGAGAGGGAGCTTTCTC
TTCTACCGCAGGCTTTGGTGTGTCAGTCTTTACTTTAGGCTTTGCATTAAGATACATAAC
GGGTATTTTTGGTTTGCTTATTAGCGTAACAAGGTTAGCTTGCACGTGAAAACTATCAGA
GAACAACTTTAAAAAGGCACTTAAATCAGCTGGTGACTTGAACATCTGGTACCAGTACTC
TTGTGGGAAGCGTGACACAATCAGGTGGAAGAGCTGGTCCACCATGACCGGGCCCTTGGC
TTCGATGCACTGAGCAATGTAGTCCAGCAGCTGCTGAGCCGTGTCCGTGTTGATGTTGGC
CACCGGCAGGTTGTGAAAGTGTTCCGAGTTAGTGTGTGCGTTATCTCTCCTATGATTCTC
ACTGACTAGAACAACATTGTCATCTATGATCTGGAAGGTGTCAGGGTGCTTCAGCAGGAA
GTCCTTGAACTCCTTAATGCGCTGTCCGGAGATGTGCCGCACCTGCGGGGAGGCCTGGCT
GCGGTGGCCGAGGAGGCTCTTGATGGGCACCTCGGTCCCCTCGCCGTACTGAATCATCTT
GCCCGCGAAGTACTGCTTGGCTTCCTCGATGTAGTCGTTGTTGGAGGAGGCGCCGGCCCC
GCTCGGGTGCTTCTGGAACGTGTTGATATCAACATAGTCCCCGTCTATGTTGAACAACGC
GGGGTACTGCGCCAGGAACTTCTTGAGCCCCGACTGTGACCCGCCAGCGATCTGCCGCAT
CTCCTTAGTGAATCCCTTGGCACCGAACTGACAGGACAGGTCGTGTAACGTGCGCGGCTC
GCCTTTATCGAGCAGGCGTTCCACGAAGAACAACAGAGTGAGGTTCCTAGCGAGCTCATA
TTCCATTGATTCCATATCCCTGCAGTTGGTGCCAATGTGTTTAACTTACACTAAATTTTA
ACTACGTATATGTGTCACCCACAACACCATGAAATATTTCTTTTTTCTCTCTGCCTTCTT
TTGGCCATAGATTAGGAGCGCGAAG
(4525 bp)

- SilkBase 1999-2023 -