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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR19921c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_pre-mRNA-processing_factor_17_[Papilio_machaon]
Ontology
GO:0000350 P generation of catalytic spliceosome for second transesterification step
GO:0000386 F second spliceosomal transesterification activity
GO:0000398 P mRNA splicing, via spliceosome
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:15.59 TPM:15.27
ORF EntryO_TrvaFAMAMG23484_complete:A_TrvaFAMAMG_TR19921c0_g1_i1
Sequence
(Nucleotide)
GTAAACACCACTGTTTTGTGATTTTATTTTGTTTAGTTTTTAATTTACTTTGTAATAAAC
ATAATATTAATGCTAGTTTTCTAAGATAAAAGGGCTATAAAATGTTAAATATAAAAAACT
ATGGCAGTAGTTCGGAAGATGAAGGTGATGACGCTGATACAAAACAAAACAGTAATGAGG
GTCTTTTGACTCATTTAAAGCCAGTCGATCCAAGTTTATCAGTAGCCAAGACCATGCAGA
TATGTGCTGCACCCGTTGTACTACCCACGAACAACGATGACGACAGAGTATTAATACCAG
CAAACGCAAAAGAGTTGACACACAATCCGAAATATGAAGAATTATACGCACCAGCTTTCG
GTCCAGAAAATCCATTTCAAACTCAACAAATGAAAGCTAATCGAAATATGTTGTCCGGTT
ATGTGGAATTGGCACATATTAGTGAATTTCAATTTGAGAATCAACGCAGAACGTTTACCA
GTTACGGTTATGCTATAGATCCTTCTACGAACGTTGAAGAGAAAGAAGGAGATGCTATAG
TGAAATCAGAAATGATAGCATCAAATGATGACACGGAAGGAAAAACAGTATTTGAAACTA
TAAAGAAGAGACCACTGGATAAAAAGAAAAGGACCAAAAATGATAATCCTGCTGATATTA
CTGGATTTCTTGGACCTTGGGGAGGATTTGAGGGAGAAAGAAGAATAATGAAGCCAGAAG
GTGACGAAGCGAAAGAATTAGAAGAGATATTAGCTAAAAGACAAAAGAAAGGAAAAGTTG
ATGATGATAAACCTTTGGAGGAGAAATCTATATTACACATTGACAACGTAACGGATTACC
AGGGTAGGTTGTGGATAGAGGTGCCGCGGAGTGAAACACAGTTACGAAGTGAATCGCCTC
CAGATAAATGTTTCTTGCCCAAGGCTCACATATTCACATGGAAGGGTCACACGAAGGGCG
TGGCTGCGGTGCGCTGGTTTCCCTCCACTGCACATCTCATGCTCTCCGCGGGAATGGATT
GTAGGGTCAAGATATGGGAGGTGTACGGTGACCGTCGCTGCATCAGAACGTATTTCGGCC
ACCGTCAGGCTGTCAGAGATGTCAATTTCAACAATTCAGGAAAACAGTTCTTATCTGCCG
CATACGACCGCTACATAAAGCTGTGGGACACGGAGACCGGGGACTGTGTGTCCCGGTTCA
CGTCCCGCAAGGTGCCGTACTGCGCCAAGTTCCACCCGGACGAGGACAAACAGAACCTGT
TCGTGGCCGGCACCTCCGATAAGAAGATTATATGTTGGGACACGCGGACCGGCGAGATAG
TCCAAGAGTACGACCGACATCTCGGCGCAGTTAACACTATCACGTTCGTCGATGAAAACA
GAAGATTTGTCACCACTTCCGATGACAAGAGTTTGAGGGTGTGGGAATGGGACATCCCGG
TCGACATGAAGTACATAGCGGACCCCACCATGCACTCGCTGCCGGCGGTCACCGTCGCGC
CCAACGGCAAGTGGCTCGCCTGCCAGTCCATGGACAACAAGGTGGTGGTGTTCAGCGCGC
TCAACCGCTTCAAGATGAACCGCAAGAAGACCTTCACCGGACACATGGTCGCCGGGTACG
CCTGCACCGTGGACCTGTCGCCGGACATGAGTTATCTGGTTTCCGGCGATGCGGATGGAA
AATGCTACATTTGGGATTGGAAGACAACGAAACTTTACAAAAAGTGGAAAGCACACGACG
GAGTCTGTATAACATCACTATGGCACCCTCACGAGCCAAGCAAACTCCTGACAGCGGGTT
GGGACGGAGCCATCAAATACTGGGACTAAATAAAACGATCAGAACCATTAAAAAAAAAAA
AAAAAAAAAAAAA
(1873 bp)

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