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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR19914c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		Uncharacterized_protein_OBRU01_08225_[Operophtera_brumata]
Ontology
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0000973 P posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery
GO:0003674 F molecular_function
GO:0005487 F structural constituent of nuclear pore
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005694 C chromosome
GO:0006355 P regulation of transcription, DNA-templated
GO:0006406 P mRNA export from nucleus
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0008150 P biological_process
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017056 F structural constituent of nuclear pore
GO:0031080 C nuclear pore outer ring
GO:0031965 C nuclear membrane
GO:0034399 C nuclear periphery
GO:0051028 P mRNA transport
GO:0051292 P nuclear pore complex assembly
Transcript
Level		FPKM:6.04 TPM:5.91
ORF EntryO_TrvaFAMAMG23481_complete:A_TrvaFAMAMG_TR19914c0_g1_i1
Sequence
(Nucleotide)
GTTTTTTTCTGCTATAGGCTATGGCACATCACTACAGAGATTTTAAAATGTCAAAATTTC
GTTAATGTCAACAAAAACGGTCGACCGGGTTGTAATTTTGTTCTGTTTATTTGGAAATTA
GAAACTTTAAAGAATAAAATATGGATAGAAGTATGCAATTACATTCTACTCAGTATACTC
CAATACGAAATAAACGCAGTCGACACCTACTCCAGAAAGAAGACACATTAAACGTCTCAC
CTATTCTGAACGATACTTACCTCTTCAAAAACTTAAATGATACGAGTTTGAGGCAAGTAC
TCGACGAAACTTCTATACTGGTCAATCCTGCAAGCGCTGGAGAGCATTTGAGCGAAGAGT
TCTTTGAGATAATACAGAATAGTCGCCCCAGCAATGTGTTGGAAACACTTGCGAGGTTAT
CTCAGGTGTGTTGCGATTCACTGGAGCTAATCGAGCCGTGGAACAGATATAATGCCCAGA
ACTACTGGCTGGCAGAGGAAGCTAACACATGGAAACTCATTCATTGCCTTTATGCAGATT
CTATCACAGAACATCCAGAGTCTTTGGAAAATGTAATCACCGAAACTACAATATCACAGC
ATAGCTTAGTAAGTGCTCTGCTCAAAAGCGATGCGGAACTGAGATTATTGAAAGTCTTGG
TGGATTGGTTAGAAGCTACCGCTGCATATCAAGAAGAAGCAACAAAGACTTCGGCCCCTA
TTATTGGTAATAATGTACATTGGGGCAACACATTACATGAGTTACTGATTGGGAATAGTC
TGTTCAATAAAGAAAAAAATAAGGCTTTAGTCACATGTATGGATCCAGATGCAAACAGAA
GACAAAAGAAATCCATACACTCTGATGATATGAAAGATGACAGTGATTTATGTAAACGAA
TCTTTACTGAAGTCCGATGTGGTAAATTTACTGATGCAATCTCATTGTGCATTAGTGCTG
GTCAGGCATGGCGAGGGGCAGTGCTACAAGGCTGGACCTTGCTACATTACTTACCGAGAG
AAAACCCTGCAGAACCACTGGAAATCAATGGAAACCCTTCAAGAGACCTTTGGAAATGGT
GTGCTTTGGGAGTGGCTAACTGCTCCTCAGAAAATATCTACTACAGAGCAACTGTAGGTA
TACTGAGTGGTCATCTAGCCAGTGCTCTTCTGGCCTGCCAAGGTAGTTGGGAAGATATCC
TGTGGGCTCACTTAAAAGTACAAATAGAAGCAAGAGTAGACAAATTTCTACATGAACATC
ACCTAACTGCTAATGCCAATACAACACCCTCAGATGTTCTGGAACTCCTGCAATCTGAAC
TACATGTAGAGGAGATCTCATTGCAACAAATCTTGGGTGAGGTGAAATCTCTAATGGGTG
GAAAACCTGAATCAAACTATCAGACCTGCCAACGGTACCTAATGCTTGGCCAAATTAGAA
CCATAATGATGGATTCATTGGGATGGCTTGAAGATTCAAATGAAAGGTTCATCAGATTCT
TGGCACATCTCATATTGATATTGAGGCAAATGGGAAAGGATCCCCAGCATGATATAGGAG
ACCAAGTTTTGGAAAAGTATGTCTCTATTCTCATCAACAAATTGATTGATGGTTCTGTAG
AAACTCCAGAGCTTATAGCATATTACACATCTACCGTTCCAGTTGAAAACCAAATAACTC
TATATGCAGACTTTATGGACCATATTCATAAGAGTGATTACAGACAGGGTGTTGTGAAGT
CAGGGCAGAATGCTGGCATTGATGTGGCTGCTGCAGCAAGGGTGGCCATCAAGAAAGCTA
TCACAGACATTCAACAAGGTTATGGCAACTTGGAATTCAACATCACACAGACCAGTGCTG
TGGAAAAGGACAAATCATTGACATCCAAAGTCATTTCCTCTTTAGAGTGGTTGTCTTTAA
TAGGAGATCAACTTCAAGAAGCTTTGTGGCTGTGTAATTCAATGATCAGAACATACATAT
TTATTGGGAACACTGATGCTGCTGGCGAGTGTGTCACTAAGTTTAGCAAAATGTTCCCTA
ATTTTATGGAAAAAGTTTGCTCAGAGACTTCTGAACTGAGAGAGCATATGTGTTTAAAAG
CATATATTGTTGCTCTTGAAGGATTTGCTACTTGGTACAGACATTTCATCAATGGACAAC
CCAAAGATGTGGAACCTTGTGCACCTGATGCAACATTCTCAGATAAAGTTCATTATGAAC
AGAGATGTAAACAAGTTGAACAACAGAAGACTTTGTGGACCAATGCTGTAGCACACCAAT
CAAAACATGCCAAGAATTTGCTCTACAATGTTCTGGTTTTTCCTGGGGGCTGGCTCCAAG
ACGAATGTGAGAGCACAATATTAGACAAATTCAGTGAAGAAGAAACAGTTGAAAGATCTA
GGCAGTTAGAGACCCTTCGTAGGCTCTGTATACCAGAAGTCGTAATGTTATTGCTTAAAA
TCTTGCAAAGTAATGGAGATGTTGAAAGTCACAAGGAAGCTATCCAGTTAAGCAGAATCA
TTGCTGCTGAGAACAGAGAAATATACTGTGTGTTTAATAGAAGTAAGCTGATGGAAGTAT
TGGAAAGATTCAAGGAGTCTTCACTGTGGCTTTTGGAAAACGGTAAAGACTTTTTAGGAT
TTGAGGAATAAGTCAAACATTTTTTGTAAAATTTTCTTTAATAAAAACATTGAAATAAAA
AAA
(2703 bp)

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