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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR19862c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		tudor_staphylococcus/micrococcal_nuclease_[Bombyx_mori]
Ontology
GO:0003676 F nucleic acid binding
GO:0004518 F nuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016442 C RISC complex
GO:0031047 P gene silencing by RNA
GO:0042470 C melanosome
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:80.46 TPM:78.84
ORF EntryO_TrvaFAMAMG23434_complete:A_TrvaFAMAMG_TR19862c0_g1_i1
Sequence
(Nucleotide)
TAGCAACCCGCCACCGCCACGTTTCGCTCGTCTCACTTTTCTGAGTTTTCAGTCGTCTTG
TTGGTTGTACGCTCGTCAGTAATTTTAGACTCGTATCCTACAAAACGGGATATCAGAATT
TTCATCCAAAATGAGTGCTCCAGCACCAGCGCCTGCTTACAAGATAGGCATAGTGAAGCA
GGTATTATCCGGAGATACCGTGGTCATAAGAAAGCAGCCTCAAGGCGGACCGCCTCCCGA
GAAAGTGATAGCCCTTTCGGGTATCACGGCGCCCAAACTCGCTCGTCAAAGGACTGCCAA
CAATGACACAGAGACGAAGGATGAGCCCTTCGCGTGGGAAGCCCGTGAATTTCTGAGGAA
GAAACTAGTCGGCAAGGAAGTTATCTTCACTGCTGAGAAACCAGCTAATTCCGCGACCAA
AGAGTACGGCGTCGTGTGGGCGGGCAAAAATCCAGCTAAAGATGAAAATGTCACTGAAGC
ATTGTTGGCCGAAGGTCTCGTTAAAGTCCGAGATGGAGCTAGAAATATCCCACAGCTCAA
AAAACTCGTAGAAATCGAGGATGCTGCCAAATCACAAAATAAAGGAATTTGGAGTGCTGA
ACCAGAAAAACACGTGCGAGACATAAAGTGGACTATTGAAAACCTTAAAGCATTCGTTAA
CAAATACAACGGAAAACCAGTAAAGGCGATTATAGAGTACGTACGCGATGGTTCCACAGT
ACGGGTTTGTTTGCTGCCCGATTACACCCCTATTACACTGATGCTCTCTGGAATTCGGTG
TCCTGCCGTAAGACAAGACGGCGAATCGGAACCTTACGGCGAAGAAGCTCGATTCTTCTT
GGAGTCTCGATTACTGCAGAAAGACGTTGAAGTCGTCCTTGAATCAGTGAACAACAACAA
TATCGTGGGAACCATCCTCCACCCTCAGGGCAACATCGCCGAAGCACTGCTCAGACAAGG
ATTCGCGAGATGCGTCGATTGGTCGTTAGCAGTCATGAAATCAGGTGCATCTACACTAAG
ACAAGCCGAATCCGCAGCCAAAGAGGCAAAACTACGTATTTGGACGAACTACGTGAGCAA
CGCCCCCATAATACCGGCAAAGGATAAAGAATTCACCGCTACCGTGCTGGAGGTTGTTAA
TGGTGACGCGCTCGTTGTTAAAACGCATAACAACGTGCAGAAAAAAATATTCCTGGCAAG
CGTCAGACCACCTCGTGAAAAGAGTAATAACACTGAGGACGATAACAAACCGGCGCCCCG
ACCTAAAGGATTCAGACCGCTATACGACATCCCGTGGATGTTTGAAGCGCGAGAATTTCT
CAGGAAAAAACTAGTTGGAAAGAAGGTCAACGTGACAGTCGATTACATACAACCAGCTAA
AGAACCTTTCCCAGAAAAGATATGTTGCTCTGTTGTGAGCGGTGGCACGAACATTGCTGA
AGCCTTAGTGAGCAAAGGTCTCGCGACAGTCGTAAAATACCGAAACGATAATGACCAGAG
AAGCTCACACTATGACAAGTTACTAGAAGCAGAACTGAAAGCAACCAAGGCAGCGATAGG
TATTCACAACAAAAAGGAAATCCCGGTTCATCGCATACAAGACACAAGTGGAGACCCAAC
CAAGGCAAGGAAGTTCTTCCCGTTCTTGAAGCGCGCTCAAAAGACAGAAGCGACCGTAGA
ATTCGTCGCCAGCGGATCCCGTATGCGAATTTACATCCCCAAAGAATCTGTACTGGTTAC
ATTCTTGCTCGCCGGTATCAACTGTCCCCGTGGAGCCCGACCTGCCATCGGAGGAGGCCC
CAAACAAAACGCAGAACCTTTCGGAGAAGAAGCCTTACAATTCACGAAAGAAAAATGTTT
GCAACACGACGTCTTAGTCAGCATCGAAGAAATCGACAAAGCTGGAAACTTCATCGGCTG
GCTCTGGGTAGACAATGACAACTTGTCTGTATCACTTGTGGAGCATGGACTTTCATCAGC
TCACCACACCGCCGAAACATCTGAATTCGCGCGCGCTATTAAGACTGCCGAAGAAAACGC
CATTAAGAAACGCATCGGCATATGGAAAGACTACGTTGAAGAGGAAAAGGAAATTGAGAA
GGAAAGAAACGCAACCGTACAAGACCGCACGCTCAAATACGACAGAGTGGTCATCACAGA
GGTGACGCCAGAAGGTCATTTCTACGCGCAAAATGTTGATCTGGGTGCGAATCTTGAAAG
CTTGATGGATGCCATCCACACGGAGTTCAGAAATAGTCATCCGCTGCCTGGTTCATACAC
GCCGAGGAAAGGAGCTATCTGCGCGGCTCGCTTCACTGCTGACGACCAATGGTACAGAGC
GAAGATCGAAAAAGTTGTAGACAACAGACAAGTCCAGGTTGTGTACATTGACTACGGAAA
CCGAGAGACAATTGATGCAAGCAGACTGGCATCGCTTCCGGCTGGCACAGAACATAACCC
TCCCTTCGCAACAGAGTATGTACTGTGCTGCGTGAAGTTCCCATCGGACCCTGATGACCG
AGCAGAAGCTGTCTCCAGTTTCTACAATGACATAGTTGGCAAGAGACTGCTCTTGAATGT
GGAATTGCGAGGATCTCCTGCTGCGGTTACTCTTGTCGATCCCAACACTAACATTGACGT
GGGCAAGAACCTGATCAAGGACGGGTTGGTGCTAGTGGAAGGCGTGCGCGACAGCCGGCT
GTCAGCGCTGCTGGGCGATTACCGCAGCGCGCAGGAGCACGCCAAGAGCTCGCGACTCAA
CCTGTGGCGGCACGGAGATATCACCGAGGACGACGCGCTGGAGTTCGGTGTGCGTCGCTA
GCAGTACGCCCCGGCCCGGCCCGGCCCGGCGCACGCCGCGCTAGCCGCCGCCGCCGCCCT
GCCCGCGCCGCTCGGGACCGCCGTGCCGCGCGACGCCACCACCTCGCCCACGCACATCCG
CAACTGTGCCACCTGCACCACGGTACACGTCGACCGCTTCCTGCACGCCATACTGGTACC
CTTCATATAAACAAACACGAGTGCTTCTGATACCGACCTTTATTCGACAGTTATAGTGAT
TGCGGACGACAACTAATTAGTATTAATATTGGAGCGTTGAACTCTAAATGAAACTGAATG
TTGTGAATAGTTATTTCTGTATTCTGATGTTATTAGGGTAGGTGTGTGTTGTGGCTAGTG
TTGCGGTGGCGGTGCTAGTGTTGCGACACTACGCAGATTAACATGCCGCGCATAATTCAA
ATATTTTTAATATTTACATTCATATTAGATTATTATATAAATAGGTCTCTACTCACTTAA
ATAATTACAAACTAATATATTTAGTGAAAGAATTTATAATTAAAAGCATAATTATCGTTG
CTCTTATATAAATGTGTTACAGATTTGTATATCAGGATTTATTATTATGTAGATCAATGT
AATAACTTATATTCATTGTTATTTCATATTATTTTAACTATACACTTTATTAGCAAAATA
TATTAGTAGTATACTAGTAGCATAATACTGTTATTTCTTTTTCTTATTTTTTTTCTAAAT
GATGTATTTTCATAACTGTTATAAATTTAGTATGAAATGTCGTTATATTTTATGAGAACA
TGTATTGTGCAAAATCAGAAGTCTGAAAATTCCTTTTTGTTTAATTTATAATGCTTGTTG
TACGGAGTGTTCTATCGATTTCTACTGATAAGCTCTTTCCTTTCGTACTTATAAATTTAT
AGTATTGTATAAGCCTACCTGTCTTTCGAGATGTTATAAAATTTGTTTACTTACCTTAAG
GTACCATTAGGTGCGTGGATTGTTAATGAACTTGGTAATAATAAATACCCATTCTAGGAA
AATTAAAAAAAAAAAAAAAAAAAAAGAAAA
(3870 bp)

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