SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR19859c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_26S_protease_regulatory_subunit_4_[Bombyx_mori]
Ontology
GO:0000022 P mitotic spindle elongation
GO:0000166 F nucleotide binding
GO:0000502 C proteasome complex
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005838 C proteasome regulatory particle
GO:0006974 P cellular response to DNA damage stimulus
GO:0007052 P mitotic spindle organization
GO:0008283 P cell population proliferation
GO:0008540 C proteasome regulatory particle, base subcomplex
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0017025 F TBP-class protein binding
GO:0030163 P protein catabolic process
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0031595 C nuclear proteasome complex
GO:0031597 C cytosolic proteasome complex
GO:0036402 F proteasome-activating activity
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0045899 P positive regulation of RNA polymerase II transcription preinitiation complex assembly
GO:0090307 P mitotic spindle assembly
GO:1901800 P positive regulation of proteasomal protein catabolic process
Transcript
Level		FPKM:63.73 TPM:62.45
ORF EntryO_TrvaFAMAMG23428_complete:A_TrvaFAMAMG_TR19859c0_g1_i1
Sequence
(Nucleotide)
GGTTTTTTTTTTTTTTTTTTTTTTTTAATGTTTTAATTCAATTTATTTTAGATTATTTCA
AAAAAAAAATATGGAAAACCACCATTCTATTTGAGGTGATAAATAATTATAGATAGAGTC
CTTCAGGTGTGCCTTCCTTCTTGCGGTAGAGTACACTCTCCTTTGACTTCTTGAAATCCT
CATTAGTAACTTTCATACGGCGTTCCCTAAGCGCCATGAGACCAGCTTCAGTACATATTG
CCTTTATATCTGCACCAGAAAGATCATCTTTTGACATAATAAGTTCTGATAAGTTGACAT
CATCAGCCAATGTCATTCTGGATGTGTGTATAGTGAAAATCCTTCTCTTAGTTTTTTCAT
CAGGCAGTGGGAATTCAATCTTCCTATCGATACGGCCTGGCCGAATGAGGGCAGGATCTA
AAGTTTCAATTCGGTTTGTTGCCATGATCACCTTTACATCACCTCTTGAATCAAAACCAT
CAAGTTGGTTCAATAACTCCAACATAGTCCTTTGAATTTCCCTTTCACCTCCAGAGTTAG
AATCATAACGTTTTGTTCCTACTGCATCTATTTCATCAATGAAAACAATTGATGGGGCAT
GTTCCTCAGCAACACGGAATAATTCACGAACCAACTTTGGTCCGTCACCCAAGTATTTTT
GGATGAGTTCAGATCCGACAACACGTAGGAAGGTGGCAGATGTTTGATTTGCAACAGCTT
TAGCTAGAAGAGTCTTGCCTGTACCTGGTGGACCATACAGGATGACACCCTTGGGAGGTT
TGATACCCATTTCCTCGTAATATTCTGGATGAGTTAAAGGCAATTCCACTGATTCCTTGA
TTTCTTGAATTTGTGTATCAAGTCCACCAATGTCAGCATAAGTTTCTTGTGGAGCTTTCT
CCAACTTCATTACAGAAACCATGGGATCTGTGTCATCACCCAAAACACCAACAACTGCAT
GTACCTTATGGTTCAACAGTACAGAGCATCCAGGTTCTAACTGATCTTTGTCCACAAATG
ACAGAATACTAACATAATGTTCGCTGCCAACTGATGTTGACACTATAGCATGATTATCAT
CAATGATCTCCTCGAGATTACCCACTGACATTGGGGTTCCTCTGAGATCATCAACCTTAG
ATCTTTCTTCCTCAATTTTTTCTTCTTGTGGCTTTAATCGTTCTTGATTGCGGATAAATT
CCTCTTCCATCAAAAGATAGTCTTTTATTCTTTCTAGTTTTAACAATTTGAGTCGACATC
TTGTGTGAGGCGTGACTTGCGGAAGTTTGAGAGCAGCATCAGGGCCCTTCGCTTTCCTCT
TCTTTTTGCCGACCCTAGTTGGAATCGGAGGCTCATACTTCTTCTTCTTGTCTTTATCGT
CTTTCTTGTCTCCACCTCCACCAGATTGGTTTTGACCCATTTTAAAACTTTTTATTTAAC
TTTCGAACTATTTAGTTTAACTTGAACCATGTAAATTGATGAATTTTCAACTCAACGCGA
TTACAAAGCGAAAATTAATTTCACAGATTAAAATTACTGCAGAAAGAGTCAAA
(1553 bp)

- SilkBase 1999-2023 -