SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR1980c0_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_gamma-1-syntrophin_[Bombyx_mori]
Ontology
GO:0002230 P positive regulation of defense response to virus by host
GO:0003779 F actin binding
GO:0005198 F structural molecule activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0007154 P cell communication
GO:0008022 F protein C-terminus binding
GO:0016013 C syntrophin complex
GO:0032587 C ruffle membrane
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:0098792 P xenophagy
Transcript
Level		FPKM:0.19 TPM:0.18
ORF EntryO_TrvaFAMAMG1159_5prime_partial:A_TrvaFAMAMG_TR1980c0_g2_i1
Sequence
(Nucleotide)
AGGTCACTCACCCCACGTCAGATTGTCCAAACTTACAGATACACTCTGTATAATTAATCA
GTACTTTACCGCTGTATTTATTTTCTTTTTGTTCATATTTTTATTATTAATTCGATTGTT
GTATCGAAGCAAGGAAGGCCGGATCGACGGACGCGACTTTAGCCGTTAAGAACGCGTGCA
TGCAGAATAACAGGCTTTGTAGTATTTGACATTCTAGCTCCTTTGTTTCAATTACTTTCG
TTTCGGCATCTTGAAAGTGTAGTTTCAACTTGGATTTACCATCGTCACTTGAACCTCTTA
GCTGCGAAAATCTATATGACCACACTGGAGGAGCTCCTGGTGTTCCTTCCGTCAGAGAGA
ACCCTGCAGACCAATCTAAGGTCAACCCAGCCGCCCGCCCGGAGTGTACCACTGTGAATG
TTTTTTTCCCGAGCCGTATAACAGAGTTGACGATGTTATGTGTCCAGGCAGCCTCGACCC
TCAGCAGCTCCTGTCGCGTCTCGGCGCTGAAGTACCTCGGTCCCGGGGCTCCGACCCCCG
CGCTGCTGCTCTGCACGAGGAAGCAGTGCTGCCTCCAGTCCACCGTCTCGCTCTCCTTGA
CCGTCCTGAACATCGTCTGATACACTTTCAGGCTTTCGGGGCATTTCGCTAGGTCGGTCA
TGTTCATCGGCGGCACATCAAACAGCATGACGTCAGTTCCCTTCAGTATTAGGAACTTGG
GTCGGTAGGACTGCCAGGGCTGCGCGGCCGTCACCACGCCCTCGTGCACCCAGCCCATGT
ACTCGATGCGCTCGCCCGCCGCCAGGTCGCGGTTGAATA
(819 bp)

- SilkBase 1999-2023 -