SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR19708c0_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_transcription_elongation_factor_B_polypeptide_2_isoform_X1_[Amyelois_transitella]
Ontology
GO:0003713 F transcription coactivator activity
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0016567 P protein ubiquitination
GO:0030891 C VCB complex
GO:0032403 F protein-containing complex binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0070449 C elongin complex
Transcript
Level		FPKM:2.84 TPM:2.78
ORF EntryO_TrvaFAMAMG23344_complete:A_TrvaFAMAMG_TR19708c0_g2_i1
Sequence
(Nucleotide)
TTTTTTTTTTTTTTCACAAATCAAAACAGCTTTATTTACCGCTGGCTCATATGATGTGAA
ATCTCTTTGCACATTTACATACATACTATTATAATATTATGTTTATATTCATCTAACTCA
CATCGTTACAATATTAAGTGTTGTTTCATATCATTTCGTTATACAAAAACTGTCAACAAT
GAGACTATTAAAAATGTATACAATTTAAAAACACATTTTACGTTGTCAGTATTTTTTGTG
AACACAAAATCTGATAGTTTGAACCTGCATAACGATATTCAACAACAGAATTTATTGCAA
AAATTGTAACTCTGGAAAGCTAAATGTTATAAAACTTTCATTATAATATGAAACCTGTTT
TGTTCAGTGACAAGATCGCAGCTTATTACTATTATTATAAGACGTGCAAAGTATTCTTGT
AGGTTATTATTAATATTATTCTAAGGTACAAAATTTCTATAAGCTTAAAAAGTATGATGT
AAGCCAACTTTACGATTCCTAATGTGGACGATGGTAATTTTTGTTATTGATGCCACGTGT
TATGTGGGTGAATAACATGTATGTACCAGCATCGTGTAAATAAAGTTGAAAGTAGTCAAC
TTCATCCTGTAACTGAACTAGACTAGTTCGGAAAAATATCGACCCTTACCACGAGTTGCT
ACCTTTATAAACTCATTATTTCCAGTTGTTAACCTTAACTGTAGTTATGTGCCGACGAAT
TTAGCGACGATGTAAAGATTTGTTTTTTGAAAATAAGTTTTATTGCATTGTAATAAGGCC
CAGACTAATAAAAAAAAAGATTATAATAAGAGTCAAACTCGTAGTAGAGTCGTATTTCGC
TATCTTATTTAAGTTAAAGTTCCATCAAGTGCAAAGTGCAATTTCGATTAGTACAAACTA
CCCTACTTTTTATTTAAATAGAAACAAAAAATACGATAAATTATTTGGTATTACAGATTT
CAAGAATATCTGTCTACAGACAAGACCTTAAAAGAAGTTCGTTAAAATATGCAAATATAT
TATTAAACGCACCAGAACTCGCGCTAATTAAATGTTGGTACAAAAAATGAAAAATAATAT
TCAAAATATACATAGAATATATTTTTCTACCGGAATAGTATTGTGTAGTGAAGCGAAGCT
ACTGAAATTATTTTTTATAAAAACAACATAGAATGTAGCAGAGAGACCGTTAAGATTCTA
CGAATATAAAAAGCTCCCTATTCTCCCCTCCCTATAAAAATTAGCTAATTATTAAACTAT
CAGTTAAATAGGTACAGTTATAAAACAAAAGTTTAAGTGACATCTACCTTACTTCGTATG
ATTTAAAGTTCATAAGACATCTCGTGTCGAAAAGAATGAAAAATCGTTACACGCTAGTTA
TTTTCTTCTAAATTTTTCATTCGTAGATGTGTGTAAATAAGATGAAAACAACGAATGTTG
CGTACATATTAATGTTAAGCAAGATTATTAATGCATTTTATATTGATTTTAAAGCGTTAC
TTACAATACTGTCTAAACTTCACGAATAAAATAAATAAAATGAAACAAAATGTTGTTTTG
AAGCAGTGGTTTTCAATAATTAAAATGACGAAGTATTTTTTTTCGATGCATTGTTATCTT
CAAATTTCTCAGTAATATTAGGAGAAAATACAGCATTTAAGTCATAGTTTGGGTTTCTAC
GACTAAACCCGTAATTAATAATAAATTCCATACATGGGGTGTAATTTCACGCACAAATAT
TGAAAATATTTACAAATGTATTTTATCAAAGAAGGTACTAATTCATTTCATTTAATCTCC
ATATTAATGCATGCTTGATATTTTACTGTCTGTCTTTTTAGTAAAACCGAAATCTTGACG
ATATAAAATGCTATTGTGTATTTGTAACTGTCTCACGCCATGTATGGATACTTGGATACT
TCCACCCGATCCACAATAAAAATAATATAAACAAAGCAAACTTCTTGTAAATCGAAGCGA
CACAAAAAGTTGAAAACGTTAAACTGAACAAATCGATAAATTATTAACAAAATTTTTGTT
AAAATAAAAAATAGTAGTTAAGTTACGTGTCCGAGAACCGATGGTAGGGGCCGGACTATA
GTTCAGAACATGAACTCATATTAATATTAAATATACAAAGTCGTTGCGATACAATGTTGG
TGGTTGTATCGTTTACGTCCGAATCACAGCCTTGTCTTATTTAGTGTTGATCCATCTGTT
CTTGTCCATTGGTCTCCTGAGATTTCATAACATCAGGCAAGTCAGGCGGTGATGAGTATG
GGGTCAATTCCAGAGCTTCAAATTCACCATTGTCCTTTCTCAGAGCCAGTCCAATAGGTG
CGGGACAGTGAGCCTTTGCCGTGTTCGATGTCAGTCCAAATTCAGCCAGGGTCTTCTCGT
CCTCCATGAGTTGACTGTCCTTGTTGAACAGCATTTGACTAGAAGGAGGCACCTTTAGAA
TACCTTCAATAATTTTCTTCAACTCTAGTACTGTTGTCGTTTCCTTCGCATCCGTGAAGA
CAGTTAGTTTTTTTCGCCTTATCATTAAAAAGACATCCATTTTGATATTTTATTTAAATG
GACAACTTCTATTTAAAAAAGAAAATGCTAACAAGGCGTACGAATGAAAACGAAATTATC
GAAAACGATAACCTGAACTGACCTGAAG
(2668 bp)

- SilkBase 1999-2023 -