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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR19708c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_transcription_elongation_factor_B_polypeptide_2_isoform_X1_[Amyelois_transitella]
Ontology
GO:0003713 F transcription coactivator activity
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0016567 P protein ubiquitination
GO:0030891 C VCB complex
GO:0032403 F protein-containing complex binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0070449 C elongin complex
Transcript
Level		FPKM:26.79 TPM:26.25
ORF EntryO_TrvaFAMAMG23343_complete:A_TrvaFAMAMG_TR19708c0_g1_i1
Sequence
(Nucleotide)
TTTTTTTTTTTTTTCACAAATCAAAACAGCTTTATTTACCGCTGGCTCATATGATGTGAA
ATCTCTTTGCACATTTACATACATACTATTATAATATTATGTTTATATTCATCTAACTCA
CATCGTTACAATATTAAGTGTTGTTTCATATCATTTCGTTATACAAAAACTGTCAACAAT
GAGACTATTAAAAATGTATACAATTTAAAAACACATTTTACGTTGTCAGTATTTTTTGTG
AACACAAAATCTGATAGTTTGAACCTGCATAACGATATTCAACAACAGAATTTATTGCAA
AAATTGTAACTCTGGAAAGCTAAATGTTATAAAACTTTCATTATAATATGAAACCTGTTT
TGTTCAGTGACAAGATCGCAGCTTATTACTATTATTATAAGACGTGCAAAGTATTCTTGT
AGGTTATTATTAATATTATTCTAAGGTACAAAATTTCTATAAGCTTAAAAAGTATGATGT
AAGCCAACTTTACGATTCCTAATGTGGACGATGGTAATTTTTGTTATTGATGCCACGTGT
TATGTGGGTGAATAACATGTATGTACCAGCATCGTGTAAATAAAGTTGAAAGTAGTCAAC
TTCATCCTGTAACTGAACTAGACTAGTTCGGAAAAATATCGACCCTTACCACGAGTTGCT
ACCTTTATAAACTCATTATTTCCAGTTGTTAACCTTAACTGTAGTTATGTGCCGACGAAT
TTAGCGACGATGTAAAGATTTGTTTTTTGAAAATAAGTTTTATTGCATTGTAATAAGGCC
CAGACTAATAAAAAAAAGATTATAATAAGAGTCAAACTCGTAGTAGAGTCGTATTTCGCT
ATCTTATTTAAGTTAAAGTTCCATCAAGTGCAAAGTGCAATTTCGATTAGTACAAACTAC
CCTACTTTTTATTTAAATAGAAACAAAAAATACGATAAATTATTTGGTATTACAGATTTC
AAGAATATCTGTCTACAGACAAGACCTTAAAAGAAGTTCGTTAAAATATGCAAATATATT
ATTAAACGCACCAGAACTCGCGCTAATTAAATGTTGGTACAAAAAATGAAAAATAATATT
CAAAATATACATAGAATATATTTTTCTACCGGAATAGTATTGTGTAGTGAAGCGAAGCTA
CTGAAATTATTTTTTATAAAAACAACATAGAATGTAGCAGAGAGACCGTTAAGATTCTAC
GAATATAAAAAGCTCCCTATTCTCCCCTCCCTATAAAAATTAGCTAATTATTAAACTATC
AGTTAAATAGGTACAGTTATAAAACAAAAGTTTAAGTGACATCTACCTTACTTCGTATGA
TTTAAAGTTCATAAGACATCTCGTGTCGAAAAGAATGAAAAATCGTTACACGCTAGTTAT
TTTCTTCTAAATTTTTCATTCGTAGATGTGTGTAAATAAGATGAAAACAACGAATGTTGC
GTACATATTAATGTTAAGCAAGATTATTAATGCATTTTATATTGATTTTAAAGCGTTACT
TACAATACTGTCTAAACTTCACGAATAAAATAAATAAAATGAAACAAAATGTTGTTTTGA
AGCAGTGGTTTTCAATAATTAAAATGACGAAGTATTTTTTTTCGATGCATTGTTATCTTC
AAATTTCTCAGTAATATTAGGAGAAAATACAGCATTTAAGTCATAGTTTGGGTTTCTACG
ACTAAACCCGTAATTAATAATAAATTCCATACATGGGGTGTAATTTCACGCACAAATATT
GAAAATATTTACAAATGTATTTTATCAAAGAAGGTACTAATTCATTTCATTTAATCTCCA
TATTAATGCATGCTTGATATTTTACTGTCTGTCTTTTTAGTAAAACCGAAATCTTGACGA
TATAAAATGCTATTGTGTATTTGTAACTGTCTCACGCCATGTATGGATACTTGGATACTT
CCACCCGATCCACAATAAAAATAATATAAACAAAGCAAACTTCTTGTAAATCGAAGCGAC
ACAAAAAGTTGAAAACGTTAAACTGAACAAATCGATAAATTATTAACAAAATTTTTGTTA
AAATAAAAAATAGTAGTTAAGTTACGTGTCCGAGAACCGATGGTAGGGGCCGGACTATAG
TTCAGAACATGAACTCATATTAATATTAAATATACAAAGTCGTTGCGATACAATGTTGGT
GGTTGTATCGTTTACGTCCGAATCACAGCCTTGTCTTATTTAGTGTTGATCCATCTGTTC
TTGTCCATTGGTCTCCTGAGATTTCATAACATCAGGCAAGTCAGGCGGTGATGAGTATGG
GGTCAATTCCAGAGCTTCAAATTCACCATTGTCCTTTCTCAGAGCCAGTCCAATAGGTGC
GGGACAGTGAGCCTTTGCCGTGTTCGATGTCAGTCCAAATTCAGCCAGGGTCTTCTCGTC
CTCCATGAGTTGACTGTCCTTGTTGAACAGCATTTGACTAGAAGGAGGCACCTTTAGAAT
ACCTTCAATAATTTTCTTCAACTCTAGTACTGTTGTCGTTTCCTTCGCATCCGTGAAGAC
AGTTAGTTTTTTTCGCCTTATCATTAAAAAGACATCCATTTTGATATTTTATTTAAATGG
ACAACTTCTATTTAAAAAAGAAAATGCTAACAAGGCGTACGAATGAAAACGAAATTATCG
AAAACGATAACCTGAACTGACCTGAAG
(2667 bp)

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